Capybara microvirus Cap1_SP_52

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVM6|A0A4V1FVM6_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_52 OX=2584782 PE=3 SV=1
MM1 pKa = 7.6SKK3 pKa = 10.62NPFNIKK9 pKa = 9.79DD10 pKa = 3.61VRR12 pKa = 11.84NHH14 pKa = 5.54VSHH17 pKa = 6.96NGFDD21 pKa = 3.72LSEE24 pKa = 4.43KK25 pKa = 10.7KK26 pKa = 10.77LFTAKK31 pKa = 10.32CGEE34 pKa = 4.76LLPIMHH40 pKa = 6.52RR41 pKa = 11.84TVMPGDD47 pKa = 3.51KK48 pKa = 10.42FRR50 pKa = 11.84ITKK53 pKa = 9.15QHH55 pKa = 5.58LTRR58 pKa = 11.84TIPVDD63 pKa = 3.12TAAYY67 pKa = 6.79TRR69 pKa = 11.84LRR71 pKa = 11.84EE72 pKa = 3.86HH73 pKa = 7.01FEE75 pKa = 4.27FFFVPYY81 pKa = 10.04DD82 pKa = 3.47QLYY85 pKa = 9.76RR86 pKa = 11.84PANQVLEE93 pKa = 4.22NLSGLSSTRR102 pKa = 11.84ATSLVEE108 pKa = 3.68YY109 pKa = 8.83TQVNEE114 pKa = 3.86YY115 pKa = 10.19LPNIVYY121 pKa = 9.86SAPQSQEE128 pKa = 3.26TSYY131 pKa = 11.27LALFPSGTQSFDD143 pKa = 2.9NTTPKK148 pKa = 10.69PEE150 pKa = 4.0FRR152 pKa = 11.84NDD154 pKa = 4.37LITSLASMLNNVDD167 pKa = 2.82VSSRR171 pKa = 11.84YY172 pKa = 10.03NEE174 pKa = 3.91VGRR177 pKa = 11.84NPIYY181 pKa = 10.34ATIKK185 pKa = 9.41LLNYY189 pKa = 10.16LGYY192 pKa = 10.33GYY194 pKa = 10.46HH195 pKa = 7.22ADD197 pKa = 3.42SFLNEE202 pKa = 3.69IQPYY206 pKa = 8.86ISKK209 pKa = 10.68DD210 pKa = 3.14GEE212 pKa = 4.43RR213 pKa = 11.84ILGKK217 pKa = 10.53SFDD220 pKa = 3.78FGVAKK225 pKa = 9.19TQTRR229 pKa = 11.84LSLLPLAAYY238 pKa = 9.28QKK240 pKa = 10.47IYY242 pKa = 10.41FDD244 pKa = 4.05YY245 pKa = 10.76YY246 pKa = 11.14RR247 pKa = 11.84NEE249 pKa = 3.7QWEE252 pKa = 4.34KK253 pKa = 11.49DD254 pKa = 3.66NPSCYY259 pKa = 10.36NFDD262 pKa = 3.32YY263 pKa = 10.58MMPHH267 pKa = 6.74INVDD271 pKa = 3.22SSLNNVMQTTTTQCTLLKK289 pKa = 8.76THH291 pKa = 7.2ASFGSSPSVSFIDD304 pKa = 3.9FAFNNFATLRR314 pKa = 11.84YY315 pKa = 9.84RR316 pKa = 11.84NFKK319 pKa = 10.05KK320 pKa = 10.65DD321 pKa = 3.6LFFGCLPRR329 pKa = 11.84PQAGNTTFVPTSPIFKK345 pKa = 9.36ATDD348 pKa = 3.24TEE350 pKa = 4.67FPEE353 pKa = 3.91NGYY356 pKa = 9.94NRR358 pKa = 11.84DD359 pKa = 3.06VNTTYY364 pKa = 10.45FRR366 pKa = 11.84NANALFQSFPRR377 pKa = 11.84LQNLTPEE384 pKa = 4.1QQNIEE389 pKa = 4.15GYY391 pKa = 10.7LYY393 pKa = 10.9DD394 pKa = 3.67GSNYY398 pKa = 7.28VTPATGGFAIQDD410 pKa = 3.51FRR412 pKa = 11.84IGMALQRR419 pKa = 11.84YY420 pKa = 8.32RR421 pKa = 11.84EE422 pKa = 4.21VVGSARR428 pKa = 11.84HH429 pKa = 6.01DD430 pKa = 3.52FVNEE434 pKa = 3.74TEE436 pKa = 4.08RR437 pKa = 11.84QFGVKK442 pKa = 9.55VPQYY446 pKa = 10.44LSHH449 pKa = 6.97KK450 pKa = 9.24VQFLGEE456 pKa = 3.9FSNWIGISAIVNNNLDD472 pKa = 4.03TADD475 pKa = 3.6STTDD479 pKa = 2.81IKK481 pKa = 11.38GIGVGSSSDD490 pKa = 3.05NDD492 pKa = 4.27AINFKK497 pKa = 11.0AMEE500 pKa = 4.58FGIIMCIYY508 pKa = 10.03SVEE511 pKa = 4.07PQVDD515 pKa = 3.72YY516 pKa = 11.32EE517 pKa = 4.5FDD519 pKa = 3.51GFAPDD524 pKa = 4.49LLKK527 pKa = 11.1CHH529 pKa = 6.76ASSFANPAFDD539 pKa = 4.22NIGYY543 pKa = 9.92EE544 pKa = 4.47PIPKK548 pKa = 10.12ALISDD553 pKa = 3.78EE554 pKa = 4.4QYY556 pKa = 11.56GSDD559 pKa = 3.03IDD561 pKa = 4.18MPNQYY566 pKa = 10.2HH567 pKa = 5.49SQNHH571 pKa = 5.91LGFNVRR577 pKa = 11.84YY578 pKa = 8.53WDD580 pKa = 3.7YY581 pKa = 10.73KK582 pKa = 9.64TGFDD586 pKa = 3.55NVLGAFRR593 pKa = 11.84EE594 pKa = 4.42TLVTWVAPLNFNTLLSQLVPNFGDD618 pKa = 3.64ASDD621 pKa = 4.66ANTARR626 pKa = 11.84VNSHH630 pKa = 5.76ISANGNMKK638 pKa = 9.93YY639 pKa = 10.37HH640 pKa = 6.54NNPNYY645 pKa = 10.37GYY647 pKa = 9.99SQFPGYY653 pKa = 10.35GYY655 pKa = 9.6PIINYY660 pKa = 9.57AVFKK664 pKa = 10.55INPSLLDD671 pKa = 3.64TIFFAQVNDD680 pKa = 3.8LTEE683 pKa = 4.1TDD685 pKa = 3.56QFLVNCNLSIKK696 pKa = 10.3ALRR699 pKa = 11.84PLSWSGLPYY708 pKa = 10.89

Molecular weight: 80.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W3R5|A0A4P8W3R5_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_52 OX=2584782 PE=4 SV=1
MM1 pKa = 7.36SLCLKK6 pKa = 9.77PIKK9 pKa = 9.74IWQNNRR15 pKa = 11.84EE16 pKa = 4.07RR17 pKa = 11.84TVSCGHH23 pKa = 6.88CAHH26 pKa = 7.49CINAKK31 pKa = 10.03HH32 pKa = 6.11IRR34 pKa = 11.84NKK36 pKa = 10.24QLVEE40 pKa = 4.17LEE42 pKa = 4.85SNSHH46 pKa = 6.51PYY48 pKa = 10.68EE49 pKa = 4.17LFCTLTYY56 pKa = 11.0DD57 pKa = 4.07DD58 pKa = 3.8YY59 pKa = 11.5HH60 pKa = 7.92VPKK63 pKa = 10.47VHH65 pKa = 6.62YY66 pKa = 10.43SHH68 pKa = 6.99TNKK71 pKa = 10.2LSSIEE76 pKa = 4.14SEE78 pKa = 5.05DD79 pKa = 2.97IFEE82 pKa = 4.35FTNSRR87 pKa = 11.84FKK89 pKa = 11.49DD90 pKa = 4.09EE91 pKa = 4.14VCKK94 pKa = 10.92GRR96 pKa = 11.84FAVPNYY102 pKa = 9.04YY103 pKa = 10.66LKK105 pKa = 10.68DD106 pKa = 3.39VHH108 pKa = 7.11SINMRR113 pKa = 11.84QQLFNGEE120 pKa = 4.08IRR122 pKa = 11.84TLNYY126 pKa = 10.08VDD128 pKa = 4.48LRR130 pKa = 11.84LYY132 pKa = 9.55LQRR135 pKa = 11.84VRR137 pKa = 11.84QALRR141 pKa = 11.84RR142 pKa = 11.84SLGTNVRR149 pKa = 11.84FYY151 pKa = 11.6AVGEE155 pKa = 4.08YY156 pKa = 10.64GPKK159 pKa = 9.89KK160 pKa = 10.25YY161 pKa = 9.92RR162 pKa = 11.84PHH164 pKa = 6.62YY165 pKa = 10.21HH166 pKa = 6.68IIFWCDD172 pKa = 3.03DD173 pKa = 3.56LASRR177 pKa = 11.84DD178 pKa = 3.66WLLVNALSYY187 pKa = 9.69WPYY190 pKa = 8.59GTQIEE195 pKa = 4.49IEE197 pKa = 4.14QSRR200 pKa = 11.84KK201 pKa = 10.19KK202 pKa = 10.47LDD204 pKa = 3.44SYY206 pKa = 11.2LAGYY210 pKa = 9.46VNSEE214 pKa = 3.93TMLPPFFSCLKK225 pKa = 10.53SPMRR229 pKa = 11.84PKK231 pKa = 10.4AYY233 pKa = 9.82HH234 pKa = 6.48SNFLGQTYY242 pKa = 9.34PFAYY246 pKa = 9.64LSVMFHH252 pKa = 6.89SDD254 pKa = 3.02PGKK257 pKa = 10.48KK258 pKa = 9.64FEE260 pKa = 5.25LFKK263 pKa = 8.64TTKK266 pKa = 10.33GIYY269 pKa = 8.8DD270 pKa = 4.89TIPKK274 pKa = 10.33AIFDD278 pKa = 3.66YY279 pKa = 10.19FYY281 pKa = 11.16RR282 pKa = 11.84KK283 pKa = 9.69LPNYY287 pKa = 9.88QNLDD291 pKa = 3.34NHH293 pKa = 6.52EE294 pKa = 4.17KK295 pKa = 7.1TTLYY299 pKa = 11.27KK300 pKa = 10.55LFNVMYY306 pKa = 9.8DD307 pKa = 3.48YY308 pKa = 10.79RR309 pKa = 11.84QKK311 pKa = 10.79QVGEE315 pKa = 4.27NIPLEE320 pKa = 4.18NYY322 pKa = 9.6KK323 pKa = 10.51FSAFLEE329 pKa = 4.16DD330 pKa = 4.62LKK332 pKa = 11.35DD333 pKa = 3.86FEE335 pKa = 5.54RR336 pKa = 11.84NEE338 pKa = 4.01FYY340 pKa = 10.35IINLLGIDD348 pKa = 5.1DD349 pKa = 4.09FFEE352 pKa = 4.1YY353 pKa = 10.65LKK355 pKa = 10.41PLEE358 pKa = 4.03VNYY361 pKa = 10.2EE362 pKa = 4.15YY363 pKa = 11.35KK364 pKa = 10.67CVGEE368 pKa = 4.11NLLTYY373 pKa = 9.91RR374 pKa = 11.84WHH376 pKa = 7.08PKK378 pKa = 10.03LISLYY383 pKa = 10.01RR384 pKa = 11.84VFSIGKK390 pKa = 8.78FYY392 pKa = 10.73FWLSDD397 pKa = 3.18ITSINYY403 pKa = 7.41NTLIDD408 pKa = 3.66KK409 pKa = 10.11VIYY412 pKa = 10.68YY413 pKa = 9.89FDD415 pKa = 4.27KK416 pKa = 10.87EE417 pKa = 4.31QPQQMLANFFSNIEE431 pKa = 4.14TLPDD435 pKa = 3.77ISPQDD440 pKa = 3.48LSFLYY445 pKa = 10.93NLDD448 pKa = 4.71DD449 pKa = 5.05DD450 pKa = 5.12YY451 pKa = 11.89KK452 pKa = 11.19DD453 pKa = 3.3SKK455 pKa = 11.06LYY457 pKa = 10.69QCIKK461 pKa = 7.87THH463 pKa = 6.71AIEE466 pKa = 4.19VANDD470 pKa = 3.33NVKK473 pKa = 10.28HH474 pKa = 6.11KK475 pKa = 10.87KK476 pKa = 10.18EE477 pKa = 3.86NDD479 pKa = 3.38GLKK482 pKa = 9.93II483 pKa = 3.77

Molecular weight: 57.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1793

90

708

358.6

41.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.354 ± 1.119

1.171 ± 0.404

6.023 ± 0.635

4.964 ± 0.65

5.968 ± 0.864

4.518 ± 0.787

2.119 ± 0.467

6.247 ± 0.869

5.633 ± 1.045

9.314 ± 0.601

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.952 ± 0.343

8.31 ± 0.644

4.239 ± 0.811

5.02 ± 0.969

4.629 ± 0.288

7.808 ± 0.614

5.521 ± 0.681

4.462 ± 0.656

0.892 ± 0.15

5.856 ± 0.902
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski