Dentipellis fragilis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetes incertae sedis; Russulales; Hericiaceae; Dentipellis

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11715 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Y9Z0W0|A0A4Y9Z0W0_9AGAM Acetate--CoA ligase OS=Dentipellis fragilis OX=205917 GN=EVG20_g3933 PE=3 SV=1
MM1 pKa = 7.34FATLFTVTLLSAGAIKK17 pKa = 10.46GALAGLAINSPTLVQCEE34 pKa = 4.09DD35 pKa = 3.6AHH37 pKa = 6.88VSWASTKK44 pKa = 10.43GPYY47 pKa = 10.08NLIVTPGDD55 pKa = 3.95EE56 pKa = 4.39PCGDD60 pKa = 4.68AIVDD64 pKa = 4.35LGDD67 pKa = 3.93HH68 pKa = 7.39DD69 pKa = 4.75GTTMTYY75 pKa = 10.61SVALPAGQKK84 pKa = 10.12VLLSLQDD91 pKa = 3.73ANGDD95 pKa = 3.93EE96 pKa = 4.53AWSQEE101 pKa = 3.91LTVQAGSNTSCLPALLQVSSSISTSSVVPTVSSAKK136 pKa = 9.53FALSSTVVPLTAVTPATTLSAFALPSSDD164 pKa = 3.42PAAAAPAPSDD174 pKa = 3.54TVAGDD179 pKa = 4.38DD180 pKa = 4.41SDD182 pKa = 4.59SDD184 pKa = 4.01SPSVVGGAANAASNPFSGALAMHH207 pKa = 6.27QLYY210 pKa = 8.27TPAMLLSALATAFFVALL227 pKa = 4.01

Molecular weight: 22.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Y9XNJ3|A0A4Y9XNJ3_9AGAM Uncharacterized protein OS=Dentipellis fragilis OX=205917 GN=EVG20_g10886 PE=4 SV=1
MM1 pKa = 7.84PLQAPMRR8 pKa = 11.84PSDD11 pKa = 3.75AVSPAAAHH19 pKa = 6.79RR20 pKa = 11.84KK21 pKa = 6.57LTPAARR27 pKa = 11.84PNSFHH32 pKa = 6.87NKK34 pKa = 6.68QHH36 pKa = 5.06TTNIPRR42 pKa = 11.84TQTRR46 pKa = 11.84SRR48 pKa = 11.84RR49 pKa = 11.84WQQNWNGTTTKK60 pKa = 10.31NDD62 pKa = 3.27RR63 pKa = 11.84AAGCTGLDD71 pKa = 3.32ARR73 pKa = 11.84HH74 pKa = 5.77VLWSLLSTNVMAGAVDD90 pKa = 3.44PHH92 pKa = 6.53TYY94 pKa = 9.5ICAGQPCGACVKK106 pKa = 10.26DD107 pKa = 3.4LRR109 pKa = 11.84GRR111 pKa = 11.84NVGEE115 pKa = 3.89KK116 pKa = 10.29RR117 pKa = 11.84EE118 pKa = 4.28ACVGRR123 pKa = 11.84AGPSEE128 pKa = 4.1ISQVIPIPKK137 pKa = 9.27ISIMQGARR145 pKa = 11.84ARR147 pKa = 11.84AFAFPDD153 pKa = 3.05KK154 pKa = 10.08KK155 pKa = 10.97ARR157 pKa = 11.84IISYY161 pKa = 6.83TSRR164 pKa = 11.84RR165 pKa = 11.84HH166 pKa = 5.04SAPPHH171 pKa = 6.11DD172 pKa = 4.16TLISNPDD179 pKa = 3.55TGTMTEE185 pKa = 4.54DD186 pKa = 2.98EE187 pKa = 4.72RR188 pKa = 11.84EE189 pKa = 4.19RR190 pKa = 11.84PTATAEE196 pKa = 3.97NDD198 pKa = 3.0NDD200 pKa = 3.53IANVWRR206 pKa = 11.84APTPYY211 pKa = 10.47ASSRR215 pKa = 11.84SDD217 pKa = 3.09AFAPDD222 pKa = 3.48TQEE225 pKa = 3.46QQQRR229 pKa = 11.84HH230 pKa = 4.64QHH232 pKa = 5.3HH233 pKa = 6.62CHH235 pKa = 5.72YY236 pKa = 10.49APHH239 pKa = 7.2ALRR242 pKa = 11.84GANSLATHH250 pKa = 7.44LYY252 pKa = 6.11PTSGTPRR259 pKa = 11.84APPPQAQTPRR269 pKa = 11.84AARR272 pKa = 11.84GAAPRR277 pKa = 11.84PPPRR281 pKa = 11.84GPSRR285 pKa = 11.84PPRR288 pKa = 11.84TSGARR293 pKa = 11.84TRR295 pKa = 11.84QTGASQLGMVTVTVTGVEE313 pKa = 4.2CWSRR317 pKa = 11.84SCNVNGDD324 pKa = 3.53RR325 pKa = 11.84EE326 pKa = 4.07RR327 pKa = 11.84DD328 pKa = 3.22VDD330 pKa = 4.2SFSLVSFRR338 pKa = 11.84QLAAPAEE345 pKa = 4.24MGMEE349 pKa = 3.62IAEE352 pKa = 4.15FAFTFKK358 pKa = 9.97FTSRR362 pKa = 11.84GLGDD366 pKa = 4.15PGAKK370 pKa = 9.22RR371 pKa = 11.84CIRR374 pKa = 11.84SRR376 pKa = 11.84SRR378 pKa = 11.84TEE380 pKa = 3.53TMRR383 pKa = 11.84ISILRR388 pKa = 11.84SDD390 pKa = 3.98LASYY394 pKa = 10.12CRR396 pKa = 11.84NNANMQTSTTYY407 pKa = 10.7HH408 pKa = 5.4EE409 pKa = 5.32AKK411 pKa = 10.34RR412 pKa = 11.84SMCLCLCPATQPGTTQTTYY431 pKa = 11.67ALRR434 pKa = 11.84TRR436 pKa = 11.84RR437 pKa = 11.84RR438 pKa = 11.84GIRR441 pKa = 11.84SDD443 pKa = 3.03KK444 pKa = 10.76HH445 pKa = 4.83KK446 pKa = 11.03APAKK450 pKa = 9.77RR451 pKa = 11.84APEE454 pKa = 3.71PHH456 pKa = 7.08LLRR459 pKa = 11.84EE460 pKa = 3.97QADD463 pKa = 3.41IEE465 pKa = 4.46VADD468 pKa = 4.06RR469 pKa = 11.84RR470 pKa = 11.84RR471 pKa = 11.84GRR473 pKa = 11.84EE474 pKa = 3.36HH475 pKa = 7.02RR476 pKa = 11.84LAVEE480 pKa = 3.95ARR482 pKa = 11.84RR483 pKa = 11.84LRR485 pKa = 11.84EE486 pKa = 3.97EE487 pKa = 4.04QEE489 pKa = 4.36HH490 pKa = 5.64VSARR494 pKa = 11.84HH495 pKa = 6.55DD496 pKa = 3.99GSQHH500 pKa = 5.79SISRR504 pKa = 11.84VASRR508 pKa = 11.84EE509 pKa = 3.84LGHH512 pKa = 6.25WVSHH516 pKa = 6.55IGRR519 pKa = 11.84TRR521 pKa = 11.84RR522 pKa = 11.84RR523 pKa = 11.84KK524 pKa = 9.94RR525 pKa = 11.84EE526 pKa = 3.54EE527 pKa = 3.57AKK529 pKa = 10.38IGEE532 pKa = 4.26KK533 pKa = 9.24TVYY536 pKa = 10.52SKK538 pKa = 7.4THH540 pKa = 6.23RR541 pKa = 11.84CGSDD545 pKa = 2.97PAXGVGCKK553 pKa = 10.37NSDD556 pKa = 3.55SAA558 pKa = 5.01

Molecular weight: 61.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11715

0

11715

5974488

38

4685

510.0

56.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.399 ± 0.022

1.365 ± 0.009

5.552 ± 0.014

5.635 ± 0.02

3.552 ± 0.014

6.408 ± 0.017

2.773 ± 0.01

4.507 ± 0.017

4.099 ± 0.017

9.207 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.042 ± 0.008

3.063 ± 0.012

7.01 ± 0.027

3.628 ± 0.014

6.771 ± 0.02

8.674 ± 0.026

5.965 ± 0.013

6.312 ± 0.014

1.397 ± 0.009

2.533 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski