Drancourtella sp. An177

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Drancourtella; unclassified Drancourtella

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2789 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y4M0A3|A0A1Y4M0A3_9FIRM MerR family transcriptional regulator OS=Drancourtella sp. An177 OX=1965573 GN=B5F13_13740 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 9.89KK3 pKa = 9.52KK4 pKa = 10.11HH5 pKa = 6.68CITVLAAVLTVGLMGGILAGCGSRR29 pKa = 11.84RR30 pKa = 11.84QVQEE34 pKa = 3.55PQKK37 pKa = 10.39QQSQTNEE44 pKa = 3.58KK45 pKa = 10.65SGVICLKK52 pKa = 10.29VNPEE56 pKa = 3.56IAVSYY61 pKa = 10.38DD62 pKa = 3.33EE63 pKa = 5.1NGMVTKK69 pKa = 10.82VEE71 pKa = 3.93GRR73 pKa = 11.84NDD75 pKa = 3.57DD76 pKa = 3.81GKK78 pKa = 11.3KK79 pKa = 10.59VIAQYY84 pKa = 10.73EE85 pKa = 4.8GYY87 pKa = 9.71EE88 pKa = 4.32GKK90 pKa = 10.34ACRR93 pKa = 11.84DD94 pKa = 3.73VISEE98 pKa = 4.33LVAKK102 pKa = 10.45INDD105 pKa = 3.15AGYY108 pKa = 9.71FVEE111 pKa = 5.28EE112 pKa = 3.88TDD114 pKa = 4.23QEE116 pKa = 4.4KK117 pKa = 10.72KK118 pKa = 10.75QITLEE123 pKa = 4.05IEE125 pKa = 4.12AGSYY129 pKa = 10.88LPGDD133 pKa = 4.29DD134 pKa = 3.58FLKK137 pKa = 11.14NIVAGVQEE145 pKa = 4.29YY146 pKa = 7.78TASKK150 pKa = 10.11QLPNSVAVEE159 pKa = 4.18GEE161 pKa = 4.43SNYY164 pKa = 10.56GWTNYY169 pKa = 10.33GDD171 pKa = 3.61TDD173 pKa = 3.92YY174 pKa = 11.68GPDD177 pKa = 3.42NDD179 pKa = 5.65GVTDD183 pKa = 4.37YY184 pKa = 11.62NDD186 pKa = 3.31TDD188 pKa = 3.76YY189 pKa = 11.68GPNNDD194 pKa = 4.65GVTDD198 pKa = 4.02YY199 pKa = 11.63NDD201 pKa = 3.31TDD203 pKa = 3.76YY204 pKa = 11.68GPNNDD209 pKa = 4.91GVTDD213 pKa = 3.92YY214 pKa = 11.67NNTDD218 pKa = 3.42YY219 pKa = 11.46GPNNDD224 pKa = 4.65GVTDD228 pKa = 4.02YY229 pKa = 11.76NDD231 pKa = 3.33TDD233 pKa = 3.66YY234 pKa = 9.83GTNNDD239 pKa = 3.15GVTDD243 pKa = 4.01YY244 pKa = 11.06SAPAQNPAPSTPAPSTGGDD263 pKa = 2.93SGYY266 pKa = 11.02DD267 pKa = 3.7DD268 pKa = 5.41GNSGYY273 pKa = 10.82DD274 pKa = 3.76GGDD277 pKa = 2.91SGYY280 pKa = 11.24DD281 pKa = 3.34DD282 pKa = 4.26

Molecular weight: 30.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y4M3A9|A0A1Y4M3A9_9FIRM Uncharacterized protein OS=Drancourtella sp. An177 OX=1965573 GN=B5F13_11055 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 8.72MTFQPKK8 pKa = 8.86KK9 pKa = 8.2RR10 pKa = 11.84SRR12 pKa = 11.84AKK14 pKa = 9.27VHH16 pKa = 5.81GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTAGGRR28 pKa = 11.84KK29 pKa = 8.71VLAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.18GRR39 pKa = 11.84KK40 pKa = 8.18QLSAA44 pKa = 3.9

Molecular weight: 4.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2789

0

2789

871670

29

1996

312.5

35.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.2 ± 0.049

1.504 ± 0.019

5.519 ± 0.038

8.203 ± 0.047

4.174 ± 0.029

7.122 ± 0.039

1.791 ± 0.022

7.396 ± 0.041

7.247 ± 0.04

8.806 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.182 ± 0.025

3.918 ± 0.028

3.33 ± 0.028

3.251 ± 0.022

4.851 ± 0.042

5.506 ± 0.032

5.219 ± 0.032

6.731 ± 0.04

0.919 ± 0.015

4.131 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski