Canis familiaris papillomavirus 15

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Chipapillomavirus; Chipapillomavirus 3

Average proteome isoelectric point is 6.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|L0CKP3|L0CKP3_9PAPI Protein E7 OS=Canis familiaris papillomavirus 15 OX=1272519 GN=E7 PE=3 SV=1
MM1 pKa = 7.31IGKK4 pKa = 9.33GATLKK9 pKa = 10.95DD10 pKa = 3.3IVLEE14 pKa = 4.16EE15 pKa = 4.24QPCPYY20 pKa = 10.65DD21 pKa = 3.73EE22 pKa = 5.35LYY24 pKa = 10.79CDD26 pKa = 4.09EE27 pKa = 4.89EE28 pKa = 4.62LPPEE32 pKa = 4.39DD33 pKa = 4.17EE34 pKa = 4.72EE35 pKa = 4.24EE36 pKa = 4.66AEE38 pKa = 5.6QEE40 pKa = 4.4TQDD43 pKa = 3.21IAPYY47 pKa = 10.13RR48 pKa = 11.84IQTLCGHH55 pKa = 6.89CDD57 pKa = 2.69RR58 pKa = 11.84GIRR61 pKa = 11.84LVVLSTPHH69 pKa = 7.61GIRR72 pKa = 11.84TLEE75 pKa = 4.51DD76 pKa = 3.69LLLSCIGVCCPEE88 pKa = 4.2CASRR92 pKa = 11.84RR93 pKa = 11.84WRR95 pKa = 11.84FGRR98 pKa = 11.84AQHH101 pKa = 6.55GGG103 pKa = 3.34

Molecular weight: 11.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|L0CKP3|L0CKP3_9PAPI Protein E7 OS=Canis familiaris papillomavirus 15 OX=1272519 GN=E7 PE=3 SV=1
MM1 pKa = 7.01EE2 pKa = 4.74TLSKK6 pKa = 10.58RR7 pKa = 11.84LNALQDD13 pKa = 3.6ALLNLYY19 pKa = 10.05EE20 pKa = 4.26EE21 pKa = 5.25ASDD24 pKa = 3.56EE25 pKa = 4.14LQRR28 pKa = 11.84QVDD31 pKa = 2.97HH32 pKa = 6.56WKK34 pKa = 10.06ILRR37 pKa = 11.84QEE39 pKa = 4.03NVLLHH44 pKa = 5.48YY45 pKa = 10.24ARR47 pKa = 11.84KK48 pKa = 10.05SGVLRR53 pKa = 11.84VGMQPVPPLQVSAEE67 pKa = 4.17RR68 pKa = 11.84AKK70 pKa = 10.69HH71 pKa = 5.48AIEE74 pKa = 3.95MQIVLQSLCDD84 pKa = 3.87SQWASEE90 pKa = 4.02TWTLADD96 pKa = 3.66TSRR99 pKa = 11.84EE100 pKa = 3.94LWTAAPQRR108 pKa = 11.84CFKK111 pKa = 10.64KK112 pKa = 9.58GACIVEE118 pKa = 4.32VIYY121 pKa = 11.16DD122 pKa = 4.33GDD124 pKa = 4.35PDD126 pKa = 3.86NCMQYY131 pKa = 8.85TLWSRR136 pKa = 11.84VYY138 pKa = 10.14YY139 pKa = 10.35QDD141 pKa = 6.12GSDD144 pKa = 3.24TWQMSRR150 pKa = 11.84SQVDD154 pKa = 3.56CVGIWFWDD162 pKa = 4.06CEE164 pKa = 4.03QKK166 pKa = 10.54RR167 pKa = 11.84YY168 pKa = 8.81YY169 pKa = 11.12VKK171 pKa = 10.49FANDD175 pKa = 3.15AARR178 pKa = 11.84YY179 pKa = 6.19GTTGTWEE186 pKa = 3.85VVYY189 pKa = 10.89NGEE192 pKa = 4.67TVTSSDD198 pKa = 3.87PVTSTTPPTDD208 pKa = 3.37PCGEE212 pKa = 3.83APVYY216 pKa = 10.19HH217 pKa = 6.83RR218 pKa = 11.84RR219 pKa = 11.84LSPHH223 pKa = 6.34GPSAGDD229 pKa = 3.37ANPPIEE235 pKa = 4.88RR236 pKa = 11.84GGGDD240 pKa = 3.54RR241 pKa = 11.84TPASTPEE248 pKa = 3.78TATQVSSTYY257 pKa = 10.0TSPLPDD263 pKa = 3.41TTSPSPRR270 pKa = 11.84PLGEE274 pKa = 3.96VEE276 pKa = 3.83GDD278 pKa = 3.03RR279 pKa = 11.84GGGGGRR285 pKa = 11.84GATAEE290 pKa = 4.22PVGSSPLAAAAIAATPVSVPRR311 pKa = 11.84VPLTPRR317 pKa = 11.84KK318 pKa = 9.2RR319 pKa = 11.84PRR321 pKa = 11.84GRR323 pKa = 11.84GPSEE327 pKa = 3.88PPCRR331 pKa = 11.84RR332 pKa = 11.84QPPPSPGEE340 pKa = 3.93PEE342 pKa = 4.07PAVDD346 pKa = 3.78PGLVPVCGRR355 pKa = 11.84PRR357 pKa = 11.84TPPITPQGGQPSPLTVPVAEE377 pKa = 4.31PRR379 pKa = 11.84PVGSLTPPGGGLPPSPAPPAAEE401 pKa = 4.15AARR404 pKa = 11.84EE405 pKa = 3.96PARR408 pKa = 11.84RR409 pKa = 11.84YY410 pKa = 9.16PPAGARR416 pKa = 11.84RR417 pKa = 11.84LAVPGGHH424 pKa = 7.17PNRR427 pKa = 11.84PGDD430 pKa = 3.9LLRR433 pKa = 11.84EE434 pKa = 4.42AGHH437 pKa = 7.02LPQTAVVLCGPANALKK453 pKa = 10.3CLRR456 pKa = 11.84YY457 pKa = 9.59RR458 pKa = 11.84LQHH461 pKa = 5.29HH462 pKa = 7.16HH463 pKa = 5.65GQKK466 pKa = 10.46FLTVSTTWYY475 pKa = 8.59WAGQGSSRR483 pKa = 11.84LGPARR488 pKa = 11.84IMLTFRR494 pKa = 11.84DD495 pKa = 4.1SQQQTDD501 pKa = 3.64FFQSVRR507 pKa = 11.84LPPSISRR514 pKa = 11.84APSIFSVV521 pKa = 3.37

Molecular weight: 56.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2439

103

626

406.5

45.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.888 ± 0.571

2.296 ± 0.707

6.355 ± 0.502

6.068 ± 0.557

3.772 ± 0.54

7.913 ± 0.908

2.091 ± 0.232

3.567 ± 0.44

4.018 ± 1.046

8.282 ± 0.651

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.845 ± 0.523

3.321 ± 0.906

7.954 ± 1.386

4.182 ± 0.668

7.298 ± 0.811

7.257 ± 0.531

5.74 ± 0.539

6.929 ± 0.692

1.517 ± 0.294

2.706 ± 0.241
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski