Human adenovirus C serotype 6 (HAdV-6) (Human adenovirus 6)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Human mastadenovirus C

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 20 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E7DY82|E7DY82_ADE06 E1B 55 kDa protein OS=Human adenovirus C serotype 6 OX=10534 GN=E1B 55K PE=3 SV=1
MM1 pKa = 7.5RR2 pKa = 11.84HH3 pKa = 6.51IICHH7 pKa = 5.93GGVITEE13 pKa = 4.22EE14 pKa = 4.15MAASLLDD21 pKa = 3.6QLIEE25 pKa = 4.19EE26 pKa = 4.48VLADD30 pKa = 3.85NLPPPSHH37 pKa = 7.16FEE39 pKa = 3.8PPTLHH44 pKa = 6.78EE45 pKa = 5.5LYY47 pKa = 10.58DD48 pKa = 4.45LDD50 pKa = 3.62VTAPEE55 pKa = 4.89DD56 pKa = 3.83PNEE59 pKa = 4.13EE60 pKa = 3.85AVSQIFPEE68 pKa = 4.34SVMLAVQEE76 pKa = 4.97GIDD79 pKa = 4.38LFTFPPAPGSPEE91 pKa = 3.95PPHH94 pKa = 7.1LSRR97 pKa = 11.84QPEE100 pKa = 4.1QPEE103 pKa = 3.86QRR105 pKa = 11.84ALGPVSMPNLVPEE118 pKa = 4.78VIDD121 pKa = 3.89LTCHH125 pKa = 5.71EE126 pKa = 5.16AGFPPSDD133 pKa = 4.22DD134 pKa = 3.37EE135 pKa = 5.17DD136 pKa = 4.38EE137 pKa = 4.52EE138 pKa = 5.43GEE140 pKa = 4.43EE141 pKa = 4.08FVLDD145 pKa = 4.04YY146 pKa = 11.29VEE148 pKa = 5.48HH149 pKa = 7.23PGHH152 pKa = 6.6GCRR155 pKa = 11.84SCHH158 pKa = 4.33YY159 pKa = 9.82HH160 pKa = 6.49RR161 pKa = 11.84RR162 pKa = 11.84NTGDD166 pKa = 3.82PDD168 pKa = 3.74IMCSLCYY175 pKa = 9.84MRR177 pKa = 11.84TCGMFVYY184 pKa = 10.63SKK186 pKa = 11.39

Molecular weight: 20.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E1U5P1|E1U5P1_ADE06 Isoform of Q3S8C4 Protease OS=Human adenovirus C serotype 6 OX=10534 GN=L3 PE=2 SV=1
MM1 pKa = 7.72SKK3 pKa = 10.63RR4 pKa = 11.84KK5 pKa = 9.53IKK7 pKa = 10.84EE8 pKa = 3.51EE9 pKa = 3.89MLQVIAPEE17 pKa = 4.21IYY19 pKa = 10.25GPPKK23 pKa = 10.38KK24 pKa = 10.29EE25 pKa = 3.84EE26 pKa = 3.69QDD28 pKa = 3.54YY29 pKa = 11.05KK30 pKa = 10.5PRR32 pKa = 11.84KK33 pKa = 8.67LKK35 pKa = 10.33RR36 pKa = 11.84VKK38 pKa = 10.18KK39 pKa = 10.1KK40 pKa = 10.88KK41 pKa = 10.23KK42 pKa = 10.35DD43 pKa = 3.74DD44 pKa = 4.83DD45 pKa = 4.92DD46 pKa = 6.89DD47 pKa = 4.46EE48 pKa = 7.23LDD50 pKa = 4.68DD51 pKa = 4.91EE52 pKa = 5.32VEE54 pKa = 4.32LLHH57 pKa = 6.36ATAPRR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84VQWKK68 pKa = 7.55GRR70 pKa = 11.84RR71 pKa = 11.84VRR73 pKa = 11.84RR74 pKa = 11.84VLRR77 pKa = 11.84PGTTVVFTPGEE88 pKa = 4.05RR89 pKa = 11.84STRR92 pKa = 11.84TYY94 pKa = 10.41KK95 pKa = 10.22RR96 pKa = 11.84VYY98 pKa = 10.52DD99 pKa = 3.86EE100 pKa = 4.9VYY102 pKa = 10.77GDD104 pKa = 4.06EE105 pKa = 5.51DD106 pKa = 4.34LLEE109 pKa = 4.21QANEE113 pKa = 3.98RR114 pKa = 11.84LGEE117 pKa = 3.73FAYY120 pKa = 10.17GKK122 pKa = 9.09RR123 pKa = 11.84HH124 pKa = 6.46KK125 pKa = 11.17DD126 pKa = 3.29MLALPLDD133 pKa = 4.36EE134 pKa = 5.85GNPTPSLKK142 pKa = 10.31PVTLQQVLPALAPSEE157 pKa = 4.33EE158 pKa = 3.88KK159 pKa = 10.48RR160 pKa = 11.84GLKK163 pKa = 10.08RR164 pKa = 11.84EE165 pKa = 4.22SGDD168 pKa = 3.66LAPTVQLMVPKK179 pKa = 10.19RR180 pKa = 11.84QRR182 pKa = 11.84LEE184 pKa = 4.07DD185 pKa = 3.69VLEE188 pKa = 4.36KK189 pKa = 9.08MTVEE193 pKa = 4.41PGLEE197 pKa = 3.84PEE199 pKa = 4.26VRR201 pKa = 11.84VRR203 pKa = 11.84PIKK206 pKa = 10.29QVAPGLGVQTVDD218 pKa = 3.28VQIPTTSSTSIATATEE234 pKa = 4.06GMEE237 pKa = 4.31TQTSPVASAVADD249 pKa = 3.75AAVQAAAAAASKK261 pKa = 9.84TSTEE265 pKa = 4.18VQTDD269 pKa = 2.66PWMFRR274 pKa = 11.84VSAPRR279 pKa = 11.84RR280 pKa = 11.84PRR282 pKa = 11.84RR283 pKa = 11.84SRR285 pKa = 11.84KK286 pKa = 9.48YY287 pKa = 8.94GAASALLPEE296 pKa = 4.69YY297 pKa = 10.54ALHH300 pKa = 6.8PSIAPTPGYY309 pKa = 9.62RR310 pKa = 11.84GYY312 pKa = 9.34TYY314 pKa = 10.47RR315 pKa = 11.84PRR317 pKa = 11.84RR318 pKa = 11.84RR319 pKa = 11.84ATTRR323 pKa = 11.84RR324 pKa = 11.84RR325 pKa = 11.84TTTGTRR331 pKa = 11.84RR332 pKa = 11.84RR333 pKa = 11.84RR334 pKa = 11.84RR335 pKa = 11.84RR336 pKa = 11.84RR337 pKa = 11.84QPVLAPISVRR347 pKa = 11.84RR348 pKa = 11.84VARR351 pKa = 11.84EE352 pKa = 3.67GGRR355 pKa = 11.84TLVLPTARR363 pKa = 11.84YY364 pKa = 8.7HH365 pKa = 6.0PSIVV369 pKa = 3.15

Molecular weight: 41.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

2

20

8966

140

1056

448.3

50.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.231 ± 0.287

1.751 ± 0.329

5.365 ± 0.23

6.469 ± 0.504

3.703 ± 0.245

6.112 ± 0.244

2.331 ± 0.19

3.614 ± 0.18

3.759 ± 0.459

9.324 ± 0.408

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.61 ± 0.265

4.617 ± 0.498

6.781 ± 0.312

4.495 ± 0.28

7.45 ± 0.617

6.837 ± 0.413

5.934 ± 0.431

6.045 ± 0.264

1.26 ± 0.144

3.29 ± 0.283
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski