Penicillium aurantiogriseum partitivirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; unclassified Partitiviridae

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0S2KQ39|A0A0S2KQ39_9VIRU 47 kDa protein OS=Penicillium aurantiogriseum partitivirus 1 OX=1756157 PE=4 SV=1
MM1 pKa = 7.65PRR3 pKa = 11.84QPSEE7 pKa = 4.31VPSTLAPSDD16 pKa = 3.77SASAAGSKK24 pKa = 9.95RR25 pKa = 11.84SKK27 pKa = 9.81PGKK30 pKa = 9.73AEE32 pKa = 3.64RR33 pKa = 11.84AARR36 pKa = 11.84RR37 pKa = 11.84ATGSQAPKK45 pKa = 9.75PADD48 pKa = 3.37AGKK51 pKa = 10.96AMTFASGGMIPKK63 pKa = 8.45PQPGKK68 pKa = 10.58FPVVFQTGAGEE79 pKa = 3.96PSRR82 pKa = 11.84DD83 pKa = 3.2QGFAIEE89 pKa = 4.5PNVLADD95 pKa = 3.84TVSQFPSRR103 pKa = 11.84FTSNAGYY110 pKa = 11.13AEE112 pKa = 4.25FLTFTDD118 pKa = 5.24LDD120 pKa = 4.32DD121 pKa = 6.72DD122 pKa = 5.53DD123 pKa = 4.79FAKK126 pKa = 10.37QLKK129 pKa = 9.61SASLLRR135 pKa = 11.84LAQQLVHH142 pKa = 6.26AHH144 pKa = 5.33VNMGLPQGDD153 pKa = 4.3FAPVASTEE161 pKa = 3.93VRR163 pKa = 11.84VPASVNAYY171 pKa = 9.54LSQFGEE177 pKa = 4.24FSVPALGTRR186 pKa = 11.84FLFDD190 pKa = 5.13DD191 pKa = 3.84YY192 pKa = 11.82ASTVKK197 pKa = 10.69SIIHH201 pKa = 5.37TAEE204 pKa = 3.68QLLAASNDD212 pKa = 3.4DD213 pKa = 3.66SEE215 pKa = 7.05AILKK219 pKa = 9.94RR220 pKa = 11.84CWLPMSRR227 pKa = 11.84TDD229 pKa = 2.71GHH231 pKa = 5.59TRR233 pKa = 11.84QIIANYY239 pKa = 8.93LNQWLLTNEE248 pKa = 3.73IMYY251 pKa = 8.33PAQLLEE257 pKa = 4.18KK258 pKa = 9.8AVMSGTPPAAWDD270 pKa = 3.68KK271 pKa = 10.56IKK273 pKa = 10.66PVFGDD278 pKa = 3.47TEE280 pKa = 4.37TEE282 pKa = 3.84KK283 pKa = 11.04NRR285 pKa = 11.84FDD287 pKa = 4.14FLFSGYY293 pKa = 9.57RR294 pKa = 11.84DD295 pKa = 3.47APHH298 pKa = 6.7FVTTFTTAASSAVLEE313 pKa = 4.62EE314 pKa = 5.71IGLSWDD320 pKa = 3.71NPSAAHH326 pKa = 6.71VDD328 pKa = 3.04WTFNAKK334 pKa = 9.97EE335 pKa = 4.21SFTRR339 pKa = 11.84LSDD342 pKa = 2.68NWARR346 pKa = 11.84ISTTYY351 pKa = 11.02GRR353 pKa = 11.84FFEE356 pKa = 4.63MPSSQMNRR364 pKa = 11.84SAATGSQSQMAIVSSKK380 pKa = 11.3DD381 pKa = 3.01SVTVVKK387 pKa = 9.0THH389 pKa = 6.99LALSAPEE396 pKa = 4.16FSLVACFPATCLFSGDD412 pKa = 3.52LRR414 pKa = 11.84RR415 pKa = 11.84HH416 pKa = 4.79VVVTTPLSTVQRR428 pKa = 11.84ATEE431 pKa = 4.42FVQLDD436 pKa = 3.41WRR438 pKa = 4.22

Molecular weight: 47.7 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0S2KQ39|A0A0S2KQ39_9VIRU 47 kDa protein OS=Penicillium aurantiogriseum partitivirus 1 OX=1756157 PE=4 SV=1
MM1 pKa = 7.9AFTQEE6 pKa = 4.1PTQHH10 pKa = 5.69YY11 pKa = 9.06VLAKK15 pKa = 9.8GSHH18 pKa = 6.8LIDD21 pKa = 3.96SLHH24 pKa = 6.47LRR26 pKa = 11.84PAKK29 pKa = 10.42AGSATSEE36 pKa = 4.2DD37 pKa = 4.2VLPTGYY43 pKa = 10.64NSPNLRR49 pKa = 11.84EE50 pKa = 3.64IAKK53 pKa = 10.08FGGYY57 pKa = 7.52STYY60 pKa = 11.18SSASNTDD67 pKa = 2.61PWVRR71 pKa = 11.84EE72 pKa = 3.87TLKK75 pKa = 10.74LFSRR79 pKa = 11.84EE80 pKa = 3.86RR81 pKa = 11.84YY82 pKa = 8.44EE83 pKa = 4.06EE84 pKa = 3.99IYY86 pKa = 10.92GFTRR90 pKa = 11.84RR91 pKa = 11.84PEE93 pKa = 4.26GTPGMYY99 pKa = 10.1KK100 pKa = 10.27SLAKK104 pKa = 10.14FAGEE108 pKa = 3.83KK109 pKa = 9.93SHH111 pKa = 7.31FRR113 pKa = 11.84DD114 pKa = 3.75LTVSQQKK121 pKa = 10.56AMRR124 pKa = 11.84RR125 pKa = 11.84SIAKK129 pKa = 9.5AKK131 pKa = 10.33KK132 pKa = 9.94AFKK135 pKa = 10.34LPYY138 pKa = 9.55KK139 pKa = 10.34RR140 pKa = 11.84EE141 pKa = 3.91PLDD144 pKa = 3.15WHH146 pKa = 6.48EE147 pKa = 4.21VGQFLRR153 pKa = 11.84RR154 pKa = 11.84DD155 pKa = 3.54TSAGSTFMGQKK166 pKa = 10.07KK167 pKa = 9.93GDD169 pKa = 3.65VMEE172 pKa = 5.9DD173 pKa = 2.98IYY175 pKa = 11.47HH176 pKa = 6.14EE177 pKa = 4.38ARR179 pKa = 11.84WLGHH183 pKa = 6.06RR184 pKa = 11.84MKK186 pKa = 10.62QDD188 pKa = 3.31GEE190 pKa = 4.54SSFNPTKK197 pKa = 10.28MRR199 pKa = 11.84FPPCLAGQRR208 pKa = 11.84GGMSEE213 pKa = 4.57RR214 pKa = 11.84DD215 pKa = 3.57DD216 pKa = 3.99PKK218 pKa = 11.09TRR220 pKa = 11.84LVWIYY225 pKa = 8.98PAEE228 pKa = 3.96MLVIEE233 pKa = 5.06GFYY236 pKa = 10.8APLMYY241 pKa = 9.7RR242 pKa = 11.84DD243 pKa = 4.6FMNDD247 pKa = 2.96PNSPMLNGKK256 pKa = 8.05SAPRR260 pKa = 11.84LYY262 pKa = 11.01AEE264 pKa = 4.49WCCGLRR270 pKa = 11.84EE271 pKa = 4.19GEE273 pKa = 4.23TLYY276 pKa = 11.53GLDD279 pKa = 4.6FSAFDD284 pKa = 3.67TKK286 pKa = 11.08VPTWLIYY293 pKa = 9.48TAFDD297 pKa = 3.36ILRR300 pKa = 11.84QNIEE304 pKa = 3.32WSTFQGKK311 pKa = 8.11PVSKK315 pKa = 10.53QDD317 pKa = 3.2AQKK320 pKa = 9.9WRR322 pKa = 11.84NVWDD326 pKa = 3.59GMVWYY331 pKa = 9.07FVNTPILMPDD341 pKa = 2.41GRR343 pKa = 11.84MFRR346 pKa = 11.84KK347 pKa = 9.98YY348 pKa = 10.14RR349 pKa = 11.84GVPSGSWWTQMIDD362 pKa = 3.49SVVNYY367 pKa = 10.26ILIDD371 pKa = 3.69YY372 pKa = 9.7LAEE375 pKa = 4.23CQEE378 pKa = 4.02VEE380 pKa = 3.92IRR382 pKa = 11.84NLRR385 pKa = 11.84VLGDD389 pKa = 3.68DD390 pKa = 3.44SAFRR394 pKa = 11.84STDD397 pKa = 3.29QFSLEE402 pKa = 4.02QAKK405 pKa = 10.08VDD407 pKa = 4.07CEE409 pKa = 4.19PTHH412 pKa = 6.37MLLKK416 pKa = 10.35PEE418 pKa = 4.25KK419 pKa = 10.11CEE421 pKa = 3.96KK422 pKa = 10.32TKK424 pKa = 10.91DD425 pKa = 3.32PCEE428 pKa = 4.01FKK430 pKa = 11.23LLGTTYY436 pKa = 10.79RR437 pKa = 11.84DD438 pKa = 3.59GRR440 pKa = 11.84VHH442 pKa = 7.37RR443 pKa = 11.84PTEE446 pKa = 3.75EE447 pKa = 3.53WFKK450 pKa = 11.17LVIYY454 pKa = 9.67PEE456 pKa = 4.57SSVHH460 pKa = 5.71TLDD463 pKa = 3.85ISFTRR468 pKa = 11.84LIGLWLGGAMWDD480 pKa = 4.48KK481 pKa = 10.62EE482 pKa = 4.18FCRR485 pKa = 11.84YY486 pKa = 8.64MDD488 pKa = 4.7FFQSSYY494 pKa = 10.42PCPEE498 pKa = 4.29EE499 pKa = 4.24GWFSKK504 pKa = 10.13DD505 pKa = 3.02QKK507 pKa = 10.68RR508 pKa = 11.84WLEE511 pKa = 3.93VIYY514 pKa = 10.54SGKK517 pKa = 10.27APRR520 pKa = 11.84GWTTKK525 pKa = 10.44RR526 pKa = 11.84SLFWRR531 pKa = 11.84SIFYY535 pKa = 10.51AYY537 pKa = 10.44GG538 pKa = 3.3

Molecular weight: 62.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

976

438

538

488.0

55.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.402 ± 2.425

1.23 ± 0.357

5.738 ± 0.02

5.635 ± 0.851

5.943 ± 0.295

6.25 ± 0.655

1.844 ± 0.012

3.279 ± 0.353

5.533 ± 0.933

7.684 ± 0.098

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.971 ± 0.451

2.561 ± 0.267

6.148 ± 0.31

3.893 ± 0.441

6.352 ± 0.722

8.607 ± 1.093

6.66 ± 0.723

5.225 ± 0.765

2.664 ± 0.699

3.381 ± 1.169
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski