Mucilaginibacter mali

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter

Average proteome isoelectric point is 6.96

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5033 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A7D4PUU0|A0A7D4PUU0_9SPHI Phosphatase PAP2 family protein OS=Mucilaginibacter mali OX=2740462 GN=HQ865_12605 PE=4 SV=1
MM1 pKa = 7.52NIIPFQSVGDD11 pKa = 3.9LNFTDD16 pKa = 3.62EE17 pKa = 4.25RR18 pKa = 11.84HH19 pKa = 5.06VLRR22 pKa = 11.84GKK24 pKa = 10.08IDD26 pKa = 3.61GEE28 pKa = 4.33YY29 pKa = 9.6QPGMNEE35 pKa = 4.16FEE37 pKa = 4.45GHH39 pKa = 4.51TEE41 pKa = 4.02YY42 pKa = 11.51YY43 pKa = 10.96DD44 pKa = 3.57FFPEE48 pKa = 3.55VDD50 pKa = 3.13MLIYY54 pKa = 10.57YY55 pKa = 10.16DD56 pKa = 4.46ADD58 pKa = 3.48DD59 pKa = 3.95RR60 pKa = 11.84VNAFEE65 pKa = 5.22FFSQGPEE72 pKa = 3.78YY73 pKa = 10.64RR74 pKa = 11.84DD75 pKa = 2.95IDD77 pKa = 4.31LLSEE81 pKa = 4.52TYY83 pKa = 11.24ADD85 pKa = 3.82LLKK88 pKa = 10.67LFKK91 pKa = 11.15VFDD94 pKa = 4.15PEE96 pKa = 5.64LIIEE100 pKa = 4.28EE101 pKa = 4.86DD102 pKa = 3.42NFEE105 pKa = 4.12SAKK108 pKa = 10.86AGIVVNATEE117 pKa = 4.71PDD119 pKa = 3.92DD120 pKa = 4.96LPEE123 pKa = 4.23SVLVYY128 pKa = 10.55RR129 pKa = 11.84EE130 pKa = 4.38GYY132 pKa = 9.87YY133 pKa = 10.23EE134 pKa = 3.84

Molecular weight: 15.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A7D4ULG6|A0A7D4ULG6_9SPHI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mucilaginibacter mali OX=2740462 GN=fabF PE=3 SV=1
MM1 pKa = 7.62KK2 pKa = 9.93IARR5 pKa = 11.84ILIIAMLMATVTVSVNAGTVTAPASVVWQVKK36 pKa = 9.64LPPPPPHH43 pKa = 6.92PGKK46 pKa = 9.89PPVVVNHH53 pKa = 5.48RR54 pKa = 11.84TVTVRR59 pKa = 11.84KK60 pKa = 8.64PPAHH64 pKa = 6.52PRR66 pKa = 11.84PKK68 pKa = 9.79RR69 pKa = 11.84LHH71 pKa = 6.09IKK73 pKa = 9.91LPHH76 pKa = 6.17VKK78 pKa = 10.17LPPPPPHH85 pKa = 6.99PPLL88 pKa = 5.16

Molecular weight: 9.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5033

0

5033

1747214

24

2992

347.2

38.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.111 ± 0.032

0.804 ± 0.011

5.599 ± 0.025

4.99 ± 0.036

4.637 ± 0.025

7.143 ± 0.035

1.948 ± 0.018

6.933 ± 0.029

6.772 ± 0.034

9.186 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.427 ± 0.018

5.569 ± 0.032

4.049 ± 0.022

3.826 ± 0.025

3.969 ± 0.022

5.967 ± 0.034

6.138 ± 0.043

6.437 ± 0.025

1.24 ± 0.014

4.257 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski