Asanoa hainanensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micromonosporales; Micromonosporaceae; Asanoa

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8104 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A239GE25|A0A239GE25_9ACTN Uncharacterized protein OS=Asanoa hainanensis OX=560556 GN=SAMN05421812_101356 PE=4 SV=1
MM1 pKa = 7.62SDD3 pKa = 2.47HH4 pKa = 6.03WTWDD8 pKa = 3.48DD9 pKa = 3.05GHH11 pKa = 7.49ADD13 pKa = 3.73HH14 pKa = 7.48GDD16 pKa = 3.78HH17 pKa = 7.36GDD19 pKa = 3.33HH20 pKa = 7.2LEE22 pKa = 4.09DD23 pKa = 4.39HH24 pKa = 6.88GSHH27 pKa = 7.31DD28 pKa = 3.41EE29 pKa = 4.07HH30 pKa = 8.48GGYY33 pKa = 10.08EE34 pKa = 4.1EE35 pKa = 5.11PEE37 pKa = 4.13FDD39 pKa = 5.03SGADD43 pKa = 3.33TDD45 pKa = 4.17PFGVEE50 pKa = 4.69LGDD53 pKa = 3.56HH54 pKa = 6.6HH55 pKa = 7.39LATHH59 pKa = 7.51DD60 pKa = 4.96DD61 pKa = 3.76HH62 pKa = 9.12QEE64 pKa = 3.64WDD66 pKa = 4.13DD67 pKa = 5.43DD68 pKa = 4.45SGADD72 pKa = 5.09DD73 pKa = 4.68PFAPHH78 pKa = 6.87ALVSEE83 pKa = 4.18QHH85 pKa = 6.32DD86 pKa = 3.57WAAGLDD92 pKa = 3.84ALDD95 pKa = 5.45ADD97 pKa = 4.69DD98 pKa = 5.22TPAPLDD104 pKa = 3.44ATGLFGLDD112 pKa = 3.96PDD114 pKa = 4.0VSAYY118 pKa = 9.53TDD120 pKa = 3.82ALWPTHH126 pKa = 6.19EE127 pKa = 5.09FPAALDD133 pKa = 3.98LGADD137 pKa = 3.62LPEE140 pKa = 4.83PVDD143 pKa = 3.66GAPWTDD149 pKa = 3.39PATLGTLGPADD160 pKa = 4.96LMPSDD165 pKa = 4.17VPEE168 pKa = 4.45PTDD171 pKa = 3.36LAAYY175 pKa = 9.88AGLDD179 pKa = 3.64PASSGWEE186 pKa = 3.85TLLGSEE192 pKa = 5.15DD193 pKa = 3.85PATAALARR201 pKa = 11.84FWGPPSAA208 pKa = 4.97

Molecular weight: 21.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A239LMV0|A0A239LMV0_9ACTN Pimeloyl-ACP methyl ester carboxylesterase OS=Asanoa hainanensis OX=560556 GN=SAMN05421812_104467 PE=4 SV=1
MM1 pKa = 7.65KK2 pKa = 10.38VRR4 pKa = 11.84TSLRR8 pKa = 11.84SLARR12 pKa = 11.84KK13 pKa = 9.0PGAKK17 pKa = 8.57IVRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GRR24 pKa = 11.84IMVLNRR30 pKa = 11.84KK31 pKa = 8.1NPRR34 pKa = 11.84FSGRR38 pKa = 11.84QGG40 pKa = 2.96

Molecular weight: 4.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8104

0

8104

2630270

24

3842

324.6

34.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.062 ± 0.041

0.68 ± 0.007

6.209 ± 0.024

4.918 ± 0.026

2.884 ± 0.015

9.277 ± 0.027

2.069 ± 0.013

3.451 ± 0.019

1.805 ± 0.02

10.363 ± 0.034

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.646 ± 0.01

1.939 ± 0.019

6.093 ± 0.026

2.643 ± 0.014

7.992 ± 0.033

5.027 ± 0.024

6.168 ± 0.025

9.05 ± 0.029

1.632 ± 0.01

2.092 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski