Tursiops truncatus papillomavirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Omikronpapillomavirus; Omikronpapillomavirus 1

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H6UYP4|H6UYP4_PSPV Major capsid protein L1 OS=Tursiops truncatus papillomavirus 5 OX=1144381 GN=L1 PE=3 SV=1
MM1 pKa = 6.86VRR3 pKa = 11.84ANRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84AAEE12 pKa = 3.55KK13 pKa = 10.47DD14 pKa = 3.39LYY16 pKa = 10.53AGCRR20 pKa = 11.84AGQDD24 pKa = 3.44CLDD27 pKa = 4.88DD28 pKa = 3.58IKK30 pKa = 11.35QKK32 pKa = 10.93FEE34 pKa = 4.22QNTVADD40 pKa = 6.13RR41 pKa = 11.84ILKK44 pKa = 8.67WLSSFIYY51 pKa = 10.15LGNLGISTGRR61 pKa = 11.84GSGGGSGYY69 pKa = 10.7VPIGSGGRR77 pKa = 11.84TVRR80 pKa = 11.84PAMGGQPSRR89 pKa = 11.84PNIVVEE95 pKa = 4.13NVGPAEE101 pKa = 4.18VPVGGTIDD109 pKa = 3.5ASAPSVITPSEE120 pKa = 4.09STVVVEE126 pKa = 5.17GATTSHH132 pKa = 6.48EE133 pKa = 4.56EE134 pKa = 3.86IPLVPLHH141 pKa = 7.05PDD143 pKa = 3.18VGAGGPDD150 pKa = 3.33PSLPVAPPVDD160 pKa = 3.45VDD162 pKa = 4.13GPAVLDD168 pKa = 3.6VSLDD172 pKa = 3.54VTSTYY177 pKa = 10.62PHH179 pKa = 7.41DD180 pKa = 4.27PSIVNPGSEE189 pKa = 4.31TLSTQLPSQFEE200 pKa = 4.37RR201 pKa = 11.84PGTSPLFPTVSLQPLDD217 pKa = 3.97VSLLPGEE224 pKa = 4.63TSFPPHH230 pKa = 5.28TVINLSGTFEE240 pKa = 4.34EE241 pKa = 5.29IEE243 pKa = 4.39LDD245 pKa = 3.79VLGNTLDD252 pKa = 3.98SEE254 pKa = 4.35PLYY257 pKa = 10.25PQTSTPKK264 pKa = 10.3SRR266 pKa = 11.84LDD268 pKa = 3.33TALTSVRR275 pKa = 11.84RR276 pKa = 11.84AYY278 pKa = 10.56NRR280 pKa = 11.84RR281 pKa = 11.84TDD283 pKa = 3.42VLRR286 pKa = 11.84KK287 pKa = 8.94YY288 pKa = 8.06YY289 pKa = 10.39HH290 pKa = 7.44RR291 pKa = 11.84LTQQIQVKK299 pKa = 10.01KK300 pKa = 10.38PEE302 pKa = 4.08FLQGPSQLVSYY313 pKa = 8.88EE314 pKa = 4.04FSNQAFDD321 pKa = 4.15PDD323 pKa = 3.53TTLFYY328 pKa = 11.03SQSTEE333 pKa = 4.07NVVTAPDD340 pKa = 3.78TDD342 pKa = 4.0FQDD345 pKa = 2.64IGTLHH350 pKa = 6.68RR351 pKa = 11.84PVYY354 pKa = 10.23SIEE357 pKa = 4.18GEE359 pKa = 4.11HH360 pKa = 6.41IRR362 pKa = 11.84VSRR365 pKa = 11.84FGEE368 pKa = 3.95RR369 pKa = 11.84EE370 pKa = 3.98TIRR373 pKa = 11.84TRR375 pKa = 11.84SGATIGAKK383 pKa = 8.27VHH385 pKa = 6.94FYY387 pKa = 10.76TDD389 pKa = 3.87LSSISHH395 pKa = 6.97LADD398 pKa = 3.08TFTSGTTLDD407 pKa = 4.61PDD409 pKa = 3.38IADD412 pKa = 4.26PGIEE416 pKa = 3.64LHH418 pKa = 6.89LFGEE422 pKa = 4.74STEE425 pKa = 4.32DD426 pKa = 3.06TSIAHH431 pKa = 5.66GQGGGIQFQNGEE443 pKa = 4.39MHH445 pKa = 6.83TEE447 pKa = 3.89TQFIDD452 pKa = 3.6VSNGSLHH459 pKa = 6.91SEE461 pKa = 4.42YY462 pKa = 10.47SDD464 pKa = 3.35SMLMDD469 pKa = 4.25TYY471 pKa = 11.59SEE473 pKa = 4.47TFSNAHH479 pKa = 6.37LALLNSDD486 pKa = 3.92SSAQLMSIPEE496 pKa = 4.05LARR499 pKa = 11.84PVRR502 pKa = 11.84EE503 pKa = 4.03LAEE506 pKa = 4.39STGGLSVLYY515 pKa = 8.97PVNGSVDD522 pKa = 4.18LSTSSPSFIDD532 pKa = 3.58NKK534 pKa = 9.95PIPPFIFFLFSHH546 pKa = 7.08GDD548 pKa = 3.3PSFFLHH554 pKa = 7.12PSLLRR559 pKa = 11.84KK560 pKa = 8.78KK561 pKa = 10.06RR562 pKa = 11.84KK563 pKa = 8.94RR564 pKa = 11.84VFYY567 pKa = 10.92

Molecular weight: 61.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H6UYP5|H6UYP5_PSPV L3 OS=Tursiops truncatus papillomavirus 5 OX=1144381 GN=L3 PE=4 SV=1
MM1 pKa = 7.29GNSLIGHH8 pKa = 6.44IGFRR12 pKa = 11.84LPRR15 pKa = 11.84EE16 pKa = 4.05KK17 pKa = 10.63IMGYY21 pKa = 8.9VGEE24 pKa = 4.63MNFLSQWLIILEE36 pKa = 4.14TLILQLVLKK45 pKa = 6.77TQKK48 pKa = 10.91NNWTKK53 pKa = 10.67VPFKK57 pKa = 11.07QMLSKK62 pKa = 9.48FTQGIWRR69 pKa = 11.84NMSLISSFSSAKK81 pKa = 9.4CHH83 pKa = 6.24YY84 pKa = 10.29SLKK87 pKa = 10.44CWLKK91 pKa = 10.96YY92 pKa = 8.82ITT94 pKa = 4.65

Molecular weight: 11.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2552

94

643

364.6

40.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.564 ± 0.517

2.704 ± 0.718

6.348 ± 0.466

5.447 ± 0.279

4.35 ± 0.312

6.74 ± 0.411

2.743 ± 0.771

4.506 ± 0.4

5.486 ± 0.845

9.326 ± 0.57

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.685 ± 0.323

4.467 ± 0.585

6.583 ± 0.892

4.389 ± 0.447

4.859 ± 0.242

7.876 ± 0.892

6.74 ± 0.416

6.034 ± 0.386

1.528 ± 0.339

2.625 ± 0.387
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski