Zygosaccharomyces parabailii

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9766 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1S7HPB4|A0A1S7HPB4_9SACH Uncharacterized protein OS=Zygosaccharomyces parabailii OX=1365886 GN=BZL39_H02390 PE=4 SV=1
MM1 pKa = 7.53SLPEE5 pKa = 3.82VFQFSVHH12 pKa = 5.87TPPSLLSDD20 pKa = 4.55SITEE24 pKa = 4.31PEE26 pKa = 3.76EE27 pKa = 3.68STYY30 pKa = 10.42QEE32 pKa = 4.46EE33 pKa = 4.56LLSTPLLIEE42 pKa = 4.01DD43 pKa = 4.15TMFKK47 pKa = 10.77LDD49 pKa = 4.07LEE51 pKa = 4.54EE52 pKa = 4.57PLIEE56 pKa = 4.33QHH58 pKa = 6.09DD59 pKa = 4.13TCLVDD64 pKa = 3.64WSPQEE69 pKa = 4.69DD70 pKa = 3.8MGSEE74 pKa = 4.33FANAAQTNYY83 pKa = 10.67RR84 pKa = 11.84LWLGQAVV91 pKa = 3.37

Molecular weight: 10.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1S7HU20|A0A1S7HU20_9SACH YGL082W and YPL191C OS=Zygosaccharomyces parabailii OX=1365886 GN=ZPAR0K01420_B PE=4 SV=1
MM1 pKa = 7.73LSLARR6 pKa = 11.84NAFQASARR14 pKa = 11.84RR15 pKa = 11.84TFITIGNFSPLKK27 pKa = 10.09TMGSLPLQRR36 pKa = 11.84LLGPQLPFGMGQRR49 pKa = 11.84RR50 pKa = 11.84WKK52 pKa = 10.8SRR54 pKa = 11.84GNTYY58 pKa = 10.31QPSTLKK64 pKa = 10.31RR65 pKa = 11.84KK66 pKa = 9.59RR67 pKa = 11.84RR68 pKa = 11.84VGFLARR74 pKa = 11.84ARR76 pKa = 11.84SKK78 pKa = 10.66QGSKK82 pKa = 9.72ILQRR86 pKa = 11.84RR87 pKa = 11.84KK88 pKa = 9.93QKK90 pKa = 10.44GRR92 pKa = 11.84WFLTHH97 pKa = 7.07

Molecular weight: 11.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9766

0

9766

4869795

25

4919

498.6

56.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.255 ± 0.022

1.368 ± 0.011

5.647 ± 0.016

6.772 ± 0.023

4.304 ± 0.017

5.586 ± 0.024

2.301 ± 0.01

5.598 ± 0.018

6.642 ± 0.026

9.762 ± 0.032

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.165 ± 0.008

4.968 ± 0.017

4.594 ± 0.023

4.348 ± 0.024

4.978 ± 0.017

8.699 ± 0.048

5.461 ± 0.031

6.123 ± 0.017

1.114 ± 0.007

3.313 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski