Mycoplasma sp. OR1901

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; unclassified Mycoplasma

Average proteome isoelectric point is 6.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 651 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6N1DVW2|A0A6N1DVW2_9MOLU 50S ribosomal protein L33 OS=Mycoplasma sp. OR1901 OX=2742195 GN=rpmG PE=3 SV=1
MM1 pKa = 7.62KK2 pKa = 10.4LNKK5 pKa = 9.59KK6 pKa = 7.61VLKK9 pKa = 10.59NILITLSGISVVTTVSCSQSQAKK32 pKa = 9.76QEE34 pKa = 4.19VKK36 pKa = 10.73KK37 pKa = 10.61EE38 pKa = 4.19DD39 pKa = 3.63NSGTNADD46 pKa = 3.81TNVVKK51 pKa = 10.83EE52 pKa = 4.2NDD54 pKa = 3.7STSDD58 pKa = 3.28NVNNNSSNEE67 pKa = 3.82EE68 pKa = 4.06STTDD72 pKa = 3.22STNDD76 pKa = 2.94SKK78 pKa = 10.28TKK80 pKa = 10.35VEE82 pKa = 4.18EE83 pKa = 4.43EE84 pKa = 4.42EE85 pKa = 4.28VTTPADD91 pKa = 3.51STNEE95 pKa = 3.76RR96 pKa = 11.84TTEE99 pKa = 4.1GTNSDD104 pKa = 3.25SSSRR108 pKa = 11.84EE109 pKa = 4.05GEE111 pKa = 3.94NTTTDD116 pKa = 3.14EE117 pKa = 4.34KK118 pKa = 10.52QTEE121 pKa = 4.39EE122 pKa = 3.97VDD124 pKa = 4.22SNSSTGEE131 pKa = 3.93TSSDD135 pKa = 3.24GSGSTSGDD143 pKa = 3.11NSSTGEE149 pKa = 3.89ASSSEE154 pKa = 3.88GDD156 pKa = 3.68STSEE160 pKa = 3.99GSKK163 pKa = 10.27SDD165 pKa = 3.34SSEE168 pKa = 4.28GEE170 pKa = 4.19TSSSEE175 pKa = 4.41SEE177 pKa = 4.11STPDD181 pKa = 4.46GEE183 pKa = 4.63KK184 pKa = 9.13QTEE187 pKa = 4.44GTGSSNGEE195 pKa = 4.12TPSSGEE201 pKa = 3.87GTTTGEE207 pKa = 4.23KK208 pKa = 8.39QTGGADD214 pKa = 3.42SDD216 pKa = 4.14SSGEE220 pKa = 4.03VTSPDD225 pKa = 3.35EE226 pKa = 4.65GEE228 pKa = 4.14SGGDD232 pKa = 3.48GEE234 pKa = 4.87TEE236 pKa = 3.93GTIGSNTDD244 pKa = 3.23DD245 pKa = 4.5SGKK248 pKa = 10.41EE249 pKa = 3.8NQKK252 pKa = 9.08QQVKK256 pKa = 9.09VFVVNPKK263 pKa = 10.08LNKK266 pKa = 9.77EE267 pKa = 3.94KK268 pKa = 9.99MIEE271 pKa = 4.18IINSKK276 pKa = 10.07LKK278 pKa = 10.09NGQVKK283 pKa = 10.29LYY285 pKa = 10.24KK286 pKa = 10.11YY287 pKa = 11.08ANTEE291 pKa = 3.63YY292 pKa = 10.46FGVYY296 pKa = 9.69RR297 pKa = 11.84GGSNEE302 pKa = 3.58EE303 pKa = 3.48NRR305 pKa = 11.84FFKK308 pKa = 10.81FDD310 pKa = 3.6VNYY313 pKa = 10.84SEE315 pKa = 5.93SNVKK319 pKa = 10.22LDD321 pKa = 3.54YY322 pKa = 10.93PEE324 pKa = 3.99NAKK327 pKa = 9.3TKK329 pKa = 9.72TFLGNWDD336 pKa = 3.56ADD338 pKa = 3.87KK339 pKa = 11.19KK340 pKa = 11.2VLTISYY346 pKa = 9.26KK347 pKa = 10.36YY348 pKa = 10.2KK349 pKa = 10.74EE350 pKa = 4.1EE351 pKa = 4.2TIEE354 pKa = 4.44QSFNLSNDD362 pKa = 2.86EE363 pKa = 4.18STTDD367 pKa = 3.44EE368 pKa = 4.65NGSEE372 pKa = 4.39DD373 pKa = 3.72SSSSSSSSSSSSEE386 pKa = 3.72VSNNN390 pKa = 2.88

Molecular weight: 41.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6N1DSX4|A0A6N1DSX4_9MOLU 2 3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma sp. OR1901 OX=2742195 GN=gpmI PE=3 SV=1
MM1 pKa = 7.94AYY3 pKa = 10.34NKK5 pKa = 9.78RR6 pKa = 11.84KK7 pKa = 9.92KK8 pKa = 10.1VFSGRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84VCSFCEE21 pKa = 4.22SKK23 pKa = 10.54SQYY26 pKa = 10.55VDD28 pKa = 3.44YY29 pKa = 11.33KK30 pKa = 11.13DD31 pKa = 5.0VEE33 pKa = 4.36LLNNFISATGQIKK46 pKa = 10.25ARR48 pKa = 11.84SITGTCAKK56 pKa = 9.88HH57 pKa = 4.71QRR59 pKa = 11.84KK60 pKa = 8.97VSNAIKK66 pKa = 9.97RR67 pKa = 11.84ARR69 pKa = 11.84FIAFMPYY76 pKa = 8.59TVVRR80 pKa = 11.84VRR82 pKa = 11.84NLSKK86 pKa = 11.05

Molecular weight: 9.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

651

0

651

288149

37

4018

442.6

50.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.728 ± 0.13

0.254 ± 0.017

6.074 ± 0.075

7.67 ± 0.145

5.011 ± 0.122

4.455 ± 0.123

1.29 ± 0.035

9.032 ± 0.105

10.534 ± 0.103

9.178 ± 0.085

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.542 ± 0.051

8.968 ± 0.146

2.435 ± 0.069

3.22 ± 0.078

2.892 ± 0.054

6.771 ± 0.081

5.453 ± 0.063

5.516 ± 0.073

0.845 ± 0.029

4.132 ± 0.1
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski