Capybara microvirus Cap1_SP_244

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W5I1|A0A4P8W5I1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_244 OX=2585418 PE=4 SV=1
MM1 pKa = 8.1DD2 pKa = 6.07DD3 pKa = 4.35KK4 pKa = 11.63VVLPGNIDD12 pKa = 3.63SNVNYY17 pKa = 9.13DD18 pKa = 3.58ASMMPVSNLSDD29 pKa = 3.08WYY31 pKa = 10.94GEE33 pKa = 4.33SGGEE37 pKa = 4.35KK38 pKa = 10.13YY39 pKa = 10.6LQEE42 pKa = 4.16ATGSNIDD49 pKa = 4.1LAVMDD54 pKa = 4.72DD55 pKa = 4.6RR56 pKa = 11.84EE57 pKa = 4.23FEE59 pKa = 4.15LWTDD63 pKa = 3.09NTKK66 pKa = 8.84WQRR69 pKa = 11.84SVEE72 pKa = 4.02DD73 pKa = 3.48MKK75 pKa = 11.12RR76 pKa = 11.84AGINPFQALGSSPSTSVISGNQLDD100 pKa = 4.08ASGKK104 pKa = 10.35KK105 pKa = 9.89LDD107 pKa = 4.3AFLKK111 pKa = 10.76FLGTFLKK118 pKa = 11.03LII120 pKa = 4.32

Molecular weight: 13.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVR5|A0A4V1FVR5_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_244 OX=2585418 PE=4 SV=1
MM1 pKa = 7.74SMNCLKK7 pKa = 10.65PKK9 pKa = 8.77MAIWNKK15 pKa = 6.99EE16 pKa = 3.8TGVFKK21 pKa = 11.08LINSDD26 pKa = 3.91DD27 pKa = 3.99LEE29 pKa = 5.0SIYY32 pKa = 11.02RR33 pKa = 11.84NSNKK37 pKa = 10.22NYY39 pKa = 8.3VPLKK43 pKa = 9.91IRR45 pKa = 11.84CGKK48 pKa = 10.32CEE50 pKa = 3.89PCNLLKK56 pKa = 11.07SQDD59 pKa = 2.78WTKK62 pKa = 11.02RR63 pKa = 11.84ILCEE67 pKa = 3.61MKK69 pKa = 10.13YY70 pKa = 10.73FKK72 pKa = 10.78YY73 pKa = 10.58SYY75 pKa = 10.24FITLTYY81 pKa = 11.02DD82 pKa = 3.07NYY84 pKa = 11.02HH85 pKa = 6.5LRR87 pKa = 11.84DD88 pKa = 3.28INTRR92 pKa = 11.84DD93 pKa = 3.02IQLFIKK99 pKa = 10.32KK100 pKa = 9.3LRR102 pKa = 11.84KK103 pKa = 10.04KK104 pKa = 9.9IDD106 pKa = 3.28RR107 pKa = 11.84KK108 pKa = 10.49LKK110 pKa = 9.42YY111 pKa = 9.21ICCGEE116 pKa = 4.16YY117 pKa = 10.61GSEE120 pKa = 4.13TKK122 pKa = 10.32RR123 pKa = 11.84PHH125 pKa = 5.82YY126 pKa = 10.74HH127 pKa = 6.59MILLSDD133 pKa = 4.09YY134 pKa = 10.93EE135 pKa = 4.35FVPPEE140 pKa = 3.47WRR142 pKa = 11.84YY143 pKa = 10.3NDD145 pKa = 3.38NTFVCSEE152 pKa = 4.79LEE154 pKa = 4.6KK155 pKa = 10.23IWQNGNVRR163 pKa = 11.84ISNDD167 pKa = 3.0VNEE170 pKa = 4.29RR171 pKa = 11.84CIKK174 pKa = 9.44YY175 pKa = 7.58TLKK178 pKa = 9.84YY179 pKa = 7.54TLKK182 pKa = 10.59NVGEE186 pKa = 4.52SKK188 pKa = 10.94VFLYY192 pKa = 10.45SKK194 pKa = 10.4KK195 pKa = 10.07IGYY198 pKa = 7.34TWFEE202 pKa = 4.16EE203 pKa = 4.08NKK205 pKa = 10.34EE206 pKa = 4.16DD207 pKa = 4.09IKK209 pKa = 11.26NYY211 pKa = 10.29CGFYY215 pKa = 10.3SKK217 pKa = 10.75NGKK220 pKa = 9.36FEE222 pKa = 4.14NPPLYY227 pKa = 10.48FIRR230 pKa = 11.84KK231 pKa = 6.94MKK233 pKa = 10.89NSDD236 pKa = 3.83DD237 pKa = 4.16FNDD240 pKa = 3.77FLWYY244 pKa = 10.13DD245 pKa = 3.71DD246 pKa = 4.08FNKK249 pKa = 10.0NRR251 pKa = 11.84LGDD254 pKa = 3.87TIIDD258 pKa = 3.94FNDD261 pKa = 2.75ILASKK266 pKa = 10.27FYY268 pKa = 10.75EE269 pKa = 4.08EE270 pKa = 4.25KK271 pKa = 10.4KK272 pKa = 9.96KK273 pKa = 11.09KK274 pKa = 9.38KK275 pKa = 10.63GKK277 pKa = 10.64GILL280 pKa = 3.5

Molecular weight: 33.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1201

98

569

240.2

27.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.83 ± 1.087

1.415 ± 0.716

7.41 ± 0.685

6.495 ± 0.772

4.913 ± 0.488

5.079 ± 0.631

1.582 ± 0.311

7.244 ± 0.468

9.992 ± 2.118

8.41 ± 0.414

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.165 ± 0.317

6.994 ± 0.682

3.997 ± 0.781

2.831 ± 0.758

3.164 ± 0.553

6.911 ± 0.887

5.495 ± 0.826

5.329 ± 0.783

1.166 ± 0.493

5.579 ± 0.863
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski