Marine Group I thaumarchaeote SCGC AAA799-P11
Taxonomy: cellular organisms; Archaea; TACK group; Thaumarchaeota; Thaumarchaeota incertae sedis; Marine Group I
Average proteome isoelectric point is 6.55
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 1432 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A087S1V8|A0A087S1V8_9ARCH Nitrous-oxide reductase protein OS=Marine Group I thaumarchaeote SCGC AAA799-P11 OX=1502295 GN=nosZ PE=4 SV=1
MM1 pKa = 7.35IKK3 pKa = 10.23KK4 pKa = 9.98IIASSIVGIAIIVSLAVAFSTEE26 pKa = 4.32TEE28 pKa = 4.24PQPEE32 pKa = 4.44PAPEE36 pKa = 4.12SNPTYY41 pKa = 11.1SMQGVLQSDD50 pKa = 4.15VMTGGDD56 pKa = 3.76VIMPTKK62 pKa = 10.47VSRR65 pKa = 11.84PGCEE69 pKa = 3.75EE70 pKa = 3.52TDD72 pKa = 2.94RR73 pKa = 11.84CYY75 pKa = 10.45IPSVITISAGDD86 pKa = 3.59SVTWVNEE93 pKa = 3.41DD94 pKa = 3.67SAFHH98 pKa = 6.22SVTSGFYY105 pKa = 10.48DD106 pKa = 3.75EE107 pKa = 5.24PQDD110 pKa = 4.78LFDD113 pKa = 5.1SGHH116 pKa = 6.38MDD118 pKa = 3.44PFDD121 pKa = 4.82SYY123 pKa = 11.79TLTFDD128 pKa = 3.36EE129 pKa = 5.7KK130 pKa = 10.63GTFDD134 pKa = 4.06YY135 pKa = 11.13FCTLHH140 pKa = 6.66PWMEE144 pKa = 4.16GQVIVQQ150 pKa = 3.79
MM1 pKa = 7.35IKK3 pKa = 10.23KK4 pKa = 9.98IIASSIVGIAIIVSLAVAFSTEE26 pKa = 4.32TEE28 pKa = 4.24PQPEE32 pKa = 4.44PAPEE36 pKa = 4.12SNPTYY41 pKa = 11.1SMQGVLQSDD50 pKa = 4.15VMTGGDD56 pKa = 3.76VIMPTKK62 pKa = 10.47VSRR65 pKa = 11.84PGCEE69 pKa = 3.75EE70 pKa = 3.52TDD72 pKa = 2.94RR73 pKa = 11.84CYY75 pKa = 10.45IPSVITISAGDD86 pKa = 3.59SVTWVNEE93 pKa = 3.41DD94 pKa = 3.67SAFHH98 pKa = 6.22SVTSGFYY105 pKa = 10.48DD106 pKa = 3.75EE107 pKa = 5.24PQDD110 pKa = 4.78LFDD113 pKa = 5.1SGHH116 pKa = 6.38MDD118 pKa = 3.44PFDD121 pKa = 4.82SYY123 pKa = 11.79TLTFDD128 pKa = 3.36EE129 pKa = 5.7KK130 pKa = 10.63GTFDD134 pKa = 4.06YY135 pKa = 11.13FCTLHH140 pKa = 6.66PWMEE144 pKa = 4.16GQVIVQQ150 pKa = 3.79
Molecular weight: 16.44 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>tr|A0A087S226|A0A087S226_9ARCH Sigma 54 modulation / protein OS=Marine Group I thaumarchaeote SCGC AAA799-P11 OX=1502295 GN=AAA799P11_00525 PE=4 SV=1
MM1 pKa = 7.47AQTKK5 pKa = 8.86AQRR8 pKa = 11.84SAAAKK13 pKa = 9.49KK14 pKa = 9.83AARR17 pKa = 11.84TRR19 pKa = 11.84KK20 pKa = 9.81RR21 pKa = 11.84NAKK24 pKa = 9.85LKK26 pKa = 11.0AEE28 pKa = 4.38AAAKK32 pKa = 10.17AAVKK36 pKa = 10.37RR37 pKa = 11.84KK38 pKa = 8.37RR39 pKa = 11.84TAAAKK44 pKa = 9.75KK45 pKa = 9.75RR46 pKa = 11.84AVASAPKK53 pKa = 9.57KK54 pKa = 9.42RR55 pKa = 11.84SVSKK59 pKa = 10.75RR60 pKa = 11.84STSKK64 pKa = 10.69RR65 pKa = 11.84KK66 pKa = 7.61TVSKK70 pKa = 10.49KK71 pKa = 10.72APTKK75 pKa = 10.42RR76 pKa = 11.84KK77 pKa = 9.17ASKK80 pKa = 10.22KK81 pKa = 9.75AVPKK85 pKa = 10.47RR86 pKa = 11.84KK87 pKa = 7.66TAVKK91 pKa = 10.46SKK93 pKa = 10.31GNKK96 pKa = 8.57RR97 pKa = 3.39
MM1 pKa = 7.47AQTKK5 pKa = 8.86AQRR8 pKa = 11.84SAAAKK13 pKa = 9.49KK14 pKa = 9.83AARR17 pKa = 11.84TRR19 pKa = 11.84KK20 pKa = 9.81RR21 pKa = 11.84NAKK24 pKa = 9.85LKK26 pKa = 11.0AEE28 pKa = 4.38AAAKK32 pKa = 10.17AAVKK36 pKa = 10.37RR37 pKa = 11.84KK38 pKa = 8.37RR39 pKa = 11.84TAAAKK44 pKa = 9.75KK45 pKa = 9.75RR46 pKa = 11.84AVASAPKK53 pKa = 9.57KK54 pKa = 9.42RR55 pKa = 11.84SVSKK59 pKa = 10.75RR60 pKa = 11.84STSKK64 pKa = 10.69RR65 pKa = 11.84KK66 pKa = 7.61TVSKK70 pKa = 10.49KK71 pKa = 10.72APTKK75 pKa = 10.42RR76 pKa = 11.84KK77 pKa = 9.17ASKK80 pKa = 10.22KK81 pKa = 9.75AVPKK85 pKa = 10.47RR86 pKa = 11.84KK87 pKa = 7.66TAVKK91 pKa = 10.46SKK93 pKa = 10.31GNKK96 pKa = 8.57RR97 pKa = 3.39
Molecular weight: 10.51 kDa
Isoelectric point according different methods:
Peptides (in silico digests for buttom-up proteomics)
Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.| Try ESI |
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| ChTry ESI |
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| ArgC ESI |
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| LysN ESI |
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| TryLysC ESI |
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| Try MALDI |
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| ChTry MALDI |
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| ArgC MALDI |
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| LysN MALDI |
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| TryLysC MALDI |
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| Try LTQ |
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| ChTry LTQ |
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| ArgC LTQ |
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| LysN LTQ |
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| TryLysC LTQ |
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| Try MSlow |
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| ChTry MSlow |
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| ArgC MSlow |
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| LysN MSlow |
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| TryLysC MSlow |
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| Try MShigh |
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| ChTry MShigh |
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| ArgC MShigh |
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| LysN MShigh |
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| TryLysC MShigh |
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General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
319401 |
19 |
1477 |
223.0 |
25.07 |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
|---|---|---|---|---|---|---|---|---|---|
5.802 ± 0.073 | 1.077 ± 0.03 |
5.899 ± 0.081 | 7.377 ± 0.076 |
4.43 ± 0.053 | 6.208 ± 0.073 |
1.802 ± 0.034 | 8.638 ± 0.075 |
8.943 ± 0.101 | 8.521 ± 0.072 |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|
2.548 ± 0.037 | 4.981 ± 0.06 |
3.729 ± 0.046 | 3.282 ± 0.043 |
3.53 ± 0.059 | 7.16 ± 0.056 |
5.508 ± 0.066 | 6.523 ± 0.058 |
0.908 ± 0.025 | 3.092 ± 0.044 |
Most of the basic statistics you can see at this page can be downloaded from this CSV file
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
| Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 | Contact: Lukasz P. Kozlowski |