Crane-associated adenovirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; unclassified Adenoviridae

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 23 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5H2X6N2|A0A5H2X6N2_9ADEN Terminal protein pTP OS=Crane-associated adenovirus 1 OX=2559941 GN=pTP PE=4 SV=1
MM1 pKa = 8.03DD2 pKa = 4.73LQADD6 pKa = 3.9EE7 pKa = 4.89EE8 pKa = 4.51MIPGNEE14 pKa = 3.97EE15 pKa = 3.61EE16 pKa = 5.02VDD18 pKa = 3.56YY19 pKa = 10.92LLNMDD24 pKa = 5.13LDD26 pKa = 4.3LDD28 pKa = 3.65IRR30 pKa = 11.84EE31 pKa = 4.1MMMFSTLQLLDD42 pKa = 3.74YY43 pKa = 10.52EE44 pKa = 4.49NFSVSVDD51 pKa = 3.35PCSCHH56 pKa = 6.07AQSIKK61 pKa = 10.57NFGMSFHH68 pKa = 6.8TNADD72 pKa = 3.59SEE74 pKa = 4.66IYY76 pKa = 10.08PLLCSALEE84 pKa = 4.11LDD86 pKa = 4.67FSVAGTYY93 pKa = 9.68FVVNSVGSMFTSFAPTFFEE112 pKa = 4.81KK113 pKa = 10.46KK114 pKa = 9.47VEE116 pKa = 4.25SARR119 pKa = 11.84GMLINVTPDD128 pKa = 2.83KK129 pKa = 11.2QNNFLKK135 pKa = 10.81CIAQIGDD142 pKa = 3.99LGLVPCDD149 pKa = 3.49YY150 pKa = 10.92LRR152 pKa = 11.84EE153 pKa = 4.14IDD155 pKa = 3.97VDD157 pKa = 3.59TDD159 pKa = 3.92SEE161 pKa = 4.41IVRR164 pKa = 11.84MLVKK168 pKa = 10.34EE169 pKa = 4.23WFEE172 pKa = 3.85VAAVIIVHH180 pKa = 4.84WQEE183 pKa = 3.99SKK185 pKa = 10.85VASLINN191 pKa = 3.51

Molecular weight: 21.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5H2WW01|A0A5H2WW01_9ADEN U exon OS=Crane-associated adenovirus 1 OX=2559941 GN=U PE=4 SV=1
MM1 pKa = 7.65SILVSPSDD9 pKa = 3.44NRR11 pKa = 11.84GWGVRR16 pKa = 11.84RR17 pKa = 11.84CRR19 pKa = 11.84RR20 pKa = 11.84GIRR23 pKa = 11.84GVGCRR28 pKa = 11.84RR29 pKa = 11.84GLTLRR34 pKa = 11.84GLLGMGARR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84VRR46 pKa = 11.84RR47 pKa = 11.84SRR49 pKa = 11.84ARR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84APPVSRR59 pKa = 11.84TTLVAVRR66 pKa = 11.84STRR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84RR72 pKa = 11.84RR73 pKa = 3.21

Molecular weight: 8.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

23

0

23

9287

73

1206

403.8

45.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.588 ± 0.292

1.798 ± 0.293

5.61 ± 0.249

5.739 ± 0.433

4.469 ± 0.255

4.824 ± 0.36

2.014 ± 0.157

6.967 ± 0.261

5.545 ± 0.703

8.463 ± 0.366

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.66 ± 0.206

7.161 ± 0.37

5.502 ± 0.413

3.876 ± 0.237

5.19 ± 0.597

8.431 ± 0.391

5.578 ± 0.24

5.169 ± 0.208

1.152 ± 0.115

4.264 ± 0.334
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski