Capybara microvirus Cap3_SP_332

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W5N2|A0A4P8W5N2_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_332 OX=2585430 PE=4 SV=1
MM1 pKa = 6.8ITKK4 pKa = 10.41NSIKK8 pKa = 10.61LSILNFLKK16 pKa = 10.8DD17 pKa = 3.59NPNFNRR23 pKa = 11.84INTLIDD29 pKa = 3.51YY30 pKa = 10.21LKK32 pKa = 10.32FDD34 pKa = 4.8PDD36 pKa = 3.87SFVHH40 pKa = 6.32SFEE43 pKa = 5.27DD44 pKa = 3.06NGVFVDD50 pKa = 5.67LKK52 pKa = 9.75FTPTSYY58 pKa = 11.46NDD60 pKa = 3.53YY61 pKa = 10.39LISALSFADD70 pKa = 3.11QVIFHH75 pKa = 6.28SFKK78 pKa = 11.14DD79 pKa = 3.59VIEE82 pKa = 4.17VVFFFEE88 pKa = 4.22PTNDD92 pKa = 3.08FKK94 pKa = 11.5FIVYY98 pKa = 9.84GIFDD102 pKa = 5.49DD103 pKa = 6.18IIPTGNTWADD113 pKa = 3.08MTFYY117 pKa = 10.69FEE119 pKa = 4.98SCIEE123 pKa = 3.79PDD125 pKa = 3.95YY126 pKa = 10.27YY127 pKa = 10.28ISMYY131 pKa = 10.67EE132 pKa = 3.91EE133 pKa = 4.42YY134 pKa = 10.39EE135 pKa = 3.98

Molecular weight: 15.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVS2|A0A4V1FVS2_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_332 OX=2585430 PE=4 SV=1
MM1 pKa = 7.16CTSPLLIKK9 pKa = 10.74NPNCLLGLHH18 pKa = 7.09DD19 pKa = 5.66GLAKK23 pKa = 10.05SLKK26 pKa = 10.57GITNTIKK33 pKa = 10.51HH34 pKa = 5.76PQSGFKK40 pKa = 10.3DD41 pKa = 3.67YY42 pKa = 10.9LSQYY46 pKa = 10.49IYY48 pKa = 10.56VPCGKK53 pKa = 10.14CPEE56 pKa = 4.52CLNSKK61 pKa = 10.42QNDD64 pKa = 3.38IIQRR68 pKa = 11.84VSFEE72 pKa = 3.91QLTSYY77 pKa = 11.1EE78 pKa = 4.4FFCTLTVKK86 pKa = 10.61PGFLDD91 pKa = 3.67SAVLPDD97 pKa = 3.55SSHH100 pKa = 6.6YY101 pKa = 11.05YY102 pKa = 9.32YY103 pKa = 11.18LDD105 pKa = 3.2WSKK108 pKa = 11.73LDD110 pKa = 3.99LFFKK114 pKa = 10.78RR115 pKa = 11.84LRR117 pKa = 11.84NKK119 pKa = 10.56NIFDD123 pKa = 4.09GPFKK127 pKa = 10.82YY128 pKa = 10.39LAVQEE133 pKa = 5.04FGHH136 pKa = 5.64EE137 pKa = 3.8THH139 pKa = 6.98RR140 pKa = 11.84PHH142 pKa = 6.41FHH144 pKa = 5.99VLFFIPRR151 pKa = 11.84LGKK154 pKa = 10.36DD155 pKa = 2.89ILWPYY160 pKa = 10.39RR161 pKa = 11.84CVDD164 pKa = 3.56EE165 pKa = 5.73NFDD168 pKa = 3.91ILSNHH173 pKa = 5.76QIKK176 pKa = 10.62SRR178 pKa = 11.84ILDD181 pKa = 3.0EE182 pKa = 4.16WYY184 pKa = 9.78INKK187 pKa = 9.68GSKK190 pKa = 10.06RR191 pKa = 11.84NPQPEE196 pKa = 4.28PLTEE200 pKa = 4.16FFTYY204 pKa = 10.1CGRR207 pKa = 11.84RR208 pKa = 11.84NFDD211 pKa = 3.34FSFVDD216 pKa = 3.72PKK218 pKa = 10.66TSQDD222 pKa = 3.57LAVDD226 pKa = 4.87FYY228 pKa = 11.62ASKK231 pKa = 11.01YY232 pKa = 9.8ALKK235 pKa = 10.47PDD237 pKa = 3.14DD238 pKa = 4.13WLNKK242 pKa = 8.97KK243 pKa = 10.35LSYY246 pKa = 10.35LLYY249 pKa = 9.61MSYY252 pKa = 11.0NFYY255 pKa = 9.59STKK258 pKa = 10.75DD259 pKa = 3.33NPYY262 pKa = 8.16YY263 pKa = 10.48LAYY266 pKa = 9.75TRR268 pKa = 11.84MRR270 pKa = 11.84PRR272 pKa = 11.84IYY274 pKa = 9.66MSHH277 pKa = 6.3QLGCSDD283 pKa = 3.09STRR286 pKa = 11.84RR287 pKa = 11.84YY288 pKa = 9.68IEE290 pKa = 5.1RR291 pKa = 11.84EE292 pKa = 3.82TLDD295 pKa = 4.57NICLNYY301 pKa = 9.39PYY303 pKa = 10.28PVIHH307 pKa = 6.62SPADD311 pKa = 3.15GRR313 pKa = 11.84TYY315 pKa = 10.6PLSAYY320 pKa = 9.22FRR322 pKa = 11.84KK323 pKa = 10.15KK324 pKa = 10.0YY325 pKa = 10.69LPARR329 pKa = 11.84WYY331 pKa = 10.51DD332 pKa = 4.19DD333 pKa = 3.06MLLYY337 pKa = 9.84YY338 pKa = 10.15QRR340 pKa = 11.84NNMPLATFTHH350 pKa = 6.54NEE352 pKa = 3.88DD353 pKa = 2.96KK354 pKa = 10.98HH355 pKa = 5.84RR356 pKa = 11.84QNAINFDD363 pKa = 4.07KK364 pKa = 10.67KK365 pKa = 10.34CKK367 pKa = 10.1KK368 pKa = 9.93ILEE371 pKa = 4.11HH372 pKa = 7.19HH373 pKa = 6.48ILL375 pKa = 3.76

Molecular weight: 44.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1834

71

640

262.0

30.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.344 ± 1.353

1.527 ± 0.519

7.361 ± 0.39

3.98 ± 0.523

6.543 ± 0.873

4.526 ± 0.735

1.854 ± 0.524

6.052 ± 0.917

5.616 ± 0.564

8.342 ± 0.596

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.617 ± 0.35

7.306 ± 0.418

4.253 ± 0.665

3.762 ± 1.135

4.144 ± 0.473

8.724 ± 0.604

5.125 ± 0.571

5.507 ± 1.194

1.2 ± 0.161

6.216 ± 0.813
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski