Capybara microvirus Cap1_SP_95

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVN6|A0A4V1FVN6_9VIRU Nonstructural protein OS=Capybara microvirus Cap1_SP_95 OX=2584801 PE=4 SV=1
MM1 pKa = 7.01KK2 pKa = 9.87TYY4 pKa = 9.82MDD6 pKa = 5.26SIDD9 pKa = 4.75SGSQYY14 pKa = 11.13QFGDD18 pKa = 3.31KK19 pKa = 10.38LLQAEE24 pKa = 4.41NPKK27 pKa = 10.6SAFDD31 pKa = 4.06LSHH34 pKa = 6.93LNSLTINNCGSLIPIALWEE53 pKa = 4.37TVPSDD58 pKa = 3.27TFEE61 pKa = 4.58ISVTSLVRR69 pKa = 11.84VLPQVVPLYY78 pKa = 10.43SRR80 pKa = 11.84QRR82 pKa = 11.84LYY84 pKa = 11.15VYY86 pKa = 10.69AFYY89 pKa = 11.29SRR91 pKa = 11.84ACDD94 pKa = 3.16LWKK97 pKa = 10.58NAHH100 pKa = 6.58AYY102 pKa = 8.58YY103 pKa = 10.71KK104 pKa = 10.33KK105 pKa = 10.65GYY107 pKa = 9.61DD108 pKa = 3.29GNYY111 pKa = 9.94VINKK115 pKa = 8.75PVLTEE120 pKa = 4.18NNMSPGLWDD129 pKa = 3.64SKK131 pKa = 9.84ITADD135 pKa = 5.05SLGDD139 pKa = 3.8YY140 pKa = 10.73LGLPQGFTYY149 pKa = 10.65KK150 pKa = 10.16EE151 pKa = 3.98LSEE154 pKa = 4.14TAPINALPFFMYY166 pKa = 10.38EE167 pKa = 4.28KK168 pKa = 10.06IFQAFFIEE176 pKa = 4.75KK177 pKa = 9.64NLPYY181 pKa = 10.66YY182 pKa = 10.21RR183 pKa = 11.84DD184 pKa = 3.28NRR186 pKa = 11.84AWLPHH191 pKa = 6.97DD192 pKa = 3.74EE193 pKa = 4.35ADD195 pKa = 4.18LRR197 pKa = 11.84FGATDD202 pKa = 3.46NEE204 pKa = 4.74IISNSYY210 pKa = 9.39LAEE213 pKa = 4.28GQTGITLGSLEE224 pKa = 3.99YY225 pKa = 10.48RR226 pKa = 11.84NYY228 pKa = 9.99PLDD231 pKa = 3.88YY232 pKa = 8.81FTSALPSPTRR242 pKa = 11.84GTAPTLPFTASLSEE256 pKa = 4.09NPLVRR261 pKa = 11.84FDD263 pKa = 3.94TSPTPSSVYY272 pKa = 10.47DD273 pKa = 3.95FNSGPSASGGIRR285 pKa = 11.84RR286 pKa = 11.84AGVGYY291 pKa = 9.36FYY293 pKa = 11.39ANFPIEE299 pKa = 4.46SNSNIPLGGNGSDD312 pKa = 3.67IIIPAGSGSSIAYY325 pKa = 8.01RR326 pKa = 11.84HH327 pKa = 6.45AYY329 pKa = 10.03VDD331 pKa = 3.41MSMSEE336 pKa = 4.1FLSNITLDD344 pKa = 3.34KK345 pKa = 10.73FRR347 pKa = 11.84EE348 pKa = 4.01LSITTEE354 pKa = 3.9EE355 pKa = 4.37VEE357 pKa = 4.61RR358 pKa = 11.84MARR361 pKa = 11.84TDD363 pKa = 2.98GSYY366 pKa = 11.45VDD368 pKa = 5.06FGTTFFGIVCKK379 pKa = 10.52NAFDD383 pKa = 5.01FKK385 pKa = 10.02PTLIGATYY393 pKa = 10.5QSMNFSEE400 pKa = 4.75VLQTTPTSTSPLGAYY415 pKa = 9.17AGHH418 pKa = 7.12GISVPTNNGYY428 pKa = 9.98LGKK431 pKa = 9.85IVCDD435 pKa = 3.96DD436 pKa = 3.58YY437 pKa = 11.67GYY439 pKa = 10.95IMIVATIMPDD449 pKa = 3.07VYY451 pKa = 11.02YY452 pKa = 10.64HH453 pKa = 6.57QGLSKK458 pKa = 10.78LWTKK462 pKa = 10.55SLQSEE467 pKa = 4.24EE468 pKa = 4.45FLPKK472 pKa = 9.09RR473 pKa = 11.84AKK475 pKa = 9.64MGLIPVLNRR484 pKa = 11.84EE485 pKa = 4.45LFVSGDD491 pKa = 3.49VVTDD495 pKa = 3.58RR496 pKa = 11.84DD497 pKa = 3.47LFAYY501 pKa = 9.07QNPFDD506 pKa = 4.22EE507 pKa = 4.58MRR509 pKa = 11.84YY510 pKa = 8.1MPNEE514 pKa = 3.65IHH516 pKa = 7.05GKK518 pKa = 9.38IADD521 pKa = 3.92SEE523 pKa = 4.32NLSFFPYY530 pKa = 8.31TQARR534 pKa = 11.84HH535 pKa = 4.56FTSTPTYY542 pKa = 9.44SKK544 pKa = 11.04EE545 pKa = 3.71FFEE548 pKa = 5.2ARR550 pKa = 11.84DD551 pKa = 3.46VRR553 pKa = 11.84KK554 pKa = 10.28DD555 pKa = 3.51YY556 pKa = 11.19LAGGTAEE563 pKa = 4.66DD564 pKa = 4.8AYY566 pKa = 11.17SAQFKK571 pKa = 10.57FDD573 pKa = 3.18IRR575 pKa = 11.84AVRR578 pKa = 11.84PLSYY582 pKa = 10.25IPVPAVVVV590 pKa = 3.66

Molecular weight: 65.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7P3|A0A4P8W7P3_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_95 OX=2584801 PE=3 SV=1
MM1 pKa = 7.66VFEE4 pKa = 4.53IAFMACVYY12 pKa = 9.87PLRR15 pKa = 11.84LRR17 pKa = 11.84NVRR20 pKa = 11.84SGLPLDD26 pKa = 4.23VACGQCMNCRR36 pKa = 11.84VQKK39 pKa = 9.81TMSLSWLANMEE50 pKa = 4.16LYY52 pKa = 9.57TRR54 pKa = 11.84YY55 pKa = 10.1RR56 pKa = 11.84KK57 pKa = 9.73GQSASFVTLTYY68 pKa = 10.88DD69 pKa = 3.8DD70 pKa = 4.41SFLPRR75 pKa = 11.84VVCSDD80 pKa = 3.28GAVRR84 pKa = 11.84PTLRR88 pKa = 11.84KK89 pKa = 9.63VDD91 pKa = 3.62LQRR94 pKa = 11.84FFKK97 pKa = 10.48RR98 pKa = 11.84VRR100 pKa = 11.84KK101 pKa = 9.38NLSDD105 pKa = 4.89SGIKK109 pKa = 10.49DD110 pKa = 2.98NWSYY114 pKa = 10.68IACGEE119 pKa = 4.4HH120 pKa = 6.22GDD122 pKa = 3.86KK123 pKa = 10.77FNRR126 pKa = 11.84PHH128 pKa = 5.36YY129 pKa = 10.39HH130 pKa = 6.0FVALGLSDD138 pKa = 5.12SICDD142 pKa = 3.61YY143 pKa = 10.48SVRR146 pKa = 11.84RR147 pKa = 11.84AWRR150 pKa = 11.84FGLTDD155 pKa = 3.25TGVLRR160 pKa = 11.84QGGLNYY166 pKa = 9.64VCKK169 pKa = 10.68YY170 pKa = 5.33MTKK173 pKa = 10.68APTGRR178 pKa = 11.84LAKK181 pKa = 10.32EE182 pKa = 3.98LFTDD186 pKa = 4.69LGLEE190 pKa = 4.16KK191 pKa = 10.54PFVQHH196 pKa = 5.68SQNLGMQWILDD207 pKa = 3.79NYY209 pKa = 10.38RR210 pKa = 11.84SLVEE214 pKa = 4.75NNYY217 pKa = 10.38CYY219 pKa = 10.88YY220 pKa = 11.09DD221 pKa = 3.67NGKK224 pKa = 10.28LIPLPSALRR233 pKa = 11.84RR234 pKa = 11.84RR235 pKa = 11.84LDD237 pKa = 2.82IYY239 pKa = 10.63KK240 pKa = 10.36QYY242 pKa = 11.2DD243 pKa = 3.27DD244 pKa = 4.78SIQIKK249 pKa = 9.78RR250 pKa = 11.84LKK252 pKa = 10.8DD253 pKa = 3.2SARR256 pKa = 11.84QNGFGDD262 pKa = 3.11SWQDD266 pKa = 3.24YY267 pKa = 10.6ARR269 pKa = 11.84IHH271 pKa = 6.22AFNVEE276 pKa = 3.86KK277 pKa = 10.39MVIDD281 pKa = 3.96SSRR284 pKa = 11.84SSGVPQFDD292 pKa = 4.31CDD294 pKa = 3.66YY295 pKa = 11.06SSADD299 pKa = 4.6KK300 pKa = 10.91IPIYY304 pKa = 10.6NNHH307 pKa = 5.79NVNVANVDD315 pKa = 3.85YY316 pKa = 9.56LTTEE320 pKa = 4.2CLDD323 pKa = 3.61PVPFF327 pKa = 4.88

Molecular weight: 37.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1524

87

590

254.0

28.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.283 ± 0.947

1.378 ± 0.63

6.759 ± 0.576

5.249 ± 0.822

5.446 ± 0.671

5.709 ± 0.51

1.575 ± 0.315

4.724 ± 0.652

5.249 ± 0.795

8.202 ± 0.47

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.297 ± 0.17

5.709 ± 0.484

4.921 ± 0.722

3.215 ± 0.681

4.987 ± 0.872

9.777 ± 0.819

4.856 ± 0.888

5.906 ± 0.751

1.05 ± 0.241

5.709 ± 0.893
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski