Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast) (Torulopsis glabrata)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; Nakaseomyces/Candida clade; [Candida] glabrata

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5201 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|B4UMX9|B4UMX9_CANGA Uncharacterized protein OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CAGL0B03899g PE=4 SV=1
MM1 pKa = 7.21NEE3 pKa = 3.89KK4 pKa = 9.96IFRR7 pKa = 11.84YY8 pKa = 8.33LTLLFLFEE16 pKa = 4.89LASSLPVEE24 pKa = 4.87DD25 pKa = 4.25KK26 pKa = 11.64LNIKK30 pKa = 10.07KK31 pKa = 10.12VFEE34 pKa = 3.96KK35 pKa = 10.44RR36 pKa = 11.84AVDD39 pKa = 4.07FTPFAHH45 pKa = 6.29YY46 pKa = 7.94PRR48 pKa = 11.84PEE50 pKa = 4.59GCSSPPNSVSVGLHH64 pKa = 4.79MNLYY68 pKa = 9.29NYY70 pKa = 9.15PYY72 pKa = 10.41LYY74 pKa = 10.59VKK76 pKa = 10.45PSTKK80 pKa = 10.62GMFTNDD86 pKa = 3.39TNSDD90 pKa = 3.4SDD92 pKa = 4.18GEE94 pKa = 4.35TDD96 pKa = 3.48GDD98 pKa = 3.97SAGGIEE104 pKa = 5.14GRR106 pKa = 11.84AGQCWNPEE114 pKa = 4.0YY115 pKa = 10.27QDD117 pKa = 3.51PNFPRR122 pKa = 11.84FGYY125 pKa = 9.27KK126 pKa = 9.71QYY128 pKa = 11.68GEE130 pKa = 5.0FGASDD135 pKa = 3.89NVNGDD140 pKa = 3.14ISWDD144 pKa = 3.49HH145 pKa = 6.78NEE147 pKa = 3.87FTEE150 pKa = 4.46GCKK153 pKa = 9.77PVLAALPPGYY163 pKa = 10.12NYY165 pKa = 9.85PDD167 pKa = 4.87EE168 pKa = 4.31ITFSNFTMVLSGYY181 pKa = 8.69FKK183 pKa = 10.65PKK185 pKa = 9.3TSGVYY190 pKa = 10.11KK191 pKa = 10.73FEE193 pKa = 4.77LKK195 pKa = 10.66ADD197 pKa = 3.83DD198 pKa = 5.31FILFNFGAKK207 pKa = 9.43NAFEE211 pKa = 4.31CCNRR215 pKa = 11.84EE216 pKa = 3.63EE217 pKa = 4.92SIDD220 pKa = 3.65NFGPYY225 pKa = 8.59VAYY228 pKa = 10.53AMWPNQADD236 pKa = 3.62QEE238 pKa = 4.58LEE240 pKa = 4.13VYY242 pKa = 10.5LFEE245 pKa = 6.18DD246 pKa = 3.4SYY248 pKa = 11.61YY249 pKa = 10.22PLRR252 pKa = 11.84LFYY255 pKa = 11.07NNRR258 pKa = 11.84DD259 pKa = 3.39YY260 pKa = 11.25HH261 pKa = 7.21SKK263 pKa = 10.61FKK265 pKa = 10.68IGFYY269 pKa = 10.53PPGQTTITFDD279 pKa = 3.23FDD281 pKa = 3.85GYY283 pKa = 11.54LFMLDD288 pKa = 3.63DD289 pKa = 4.39TGNEE293 pKa = 3.98CRR295 pKa = 11.84DD296 pKa = 3.67SIRR299 pKa = 11.84YY300 pKa = 7.46RR301 pKa = 11.84TVCDD305 pKa = 4.11DD306 pKa = 3.93KK307 pKa = 11.87VVDD310 pKa = 3.77DD311 pKa = 3.93TTYY314 pKa = 8.5STRR317 pKa = 11.84YY318 pKa = 6.78STSMVPGGGSDD329 pKa = 3.72VITIYY334 pKa = 10.14YY335 pKa = 9.9IRR337 pKa = 11.84MKK339 pKa = 10.74CEE341 pKa = 3.83EE342 pKa = 4.58EE343 pKa = 4.5DD344 pKa = 5.7CLGQWDD350 pKa = 5.16PINNVCYY357 pKa = 10.83SPDD360 pKa = 3.42DD361 pKa = 4.01CADD364 pKa = 4.21DD365 pKa = 3.77GGYY368 pKa = 10.18WNGQMCDD375 pKa = 3.46QSCKK379 pKa = 10.61LEE381 pKa = 4.18GGIVNPDD388 pKa = 3.07TGDD391 pKa = 3.55CDD393 pKa = 3.79KK394 pKa = 11.66SCIEE398 pKa = 4.18SGGFLDD404 pKa = 5.56EE405 pKa = 5.62NGNCDD410 pKa = 3.45TTCRR414 pKa = 11.84DD415 pKa = 3.55DD416 pKa = 5.09GGMLVEE422 pKa = 4.61GQCDD426 pKa = 4.04YY427 pKa = 11.14QCKK430 pKa = 8.82EE431 pKa = 3.7AGGILVGDD439 pKa = 4.3HH440 pKa = 7.42CDD442 pKa = 3.6TTCVDD447 pKa = 3.85SGGKK451 pKa = 10.02LNEE454 pKa = 5.64DD455 pKa = 3.63GTCDD459 pKa = 4.13HH460 pKa = 7.05SCRR463 pKa = 11.84DD464 pKa = 3.12QGGQLDD470 pKa = 4.03EE471 pKa = 5.47SGEE474 pKa = 4.34CDD476 pKa = 3.59TSCKK480 pKa = 10.4DD481 pKa = 3.23SGGMLIEE488 pKa = 4.78GEE490 pKa = 4.73CDD492 pKa = 3.32TSCKK496 pKa = 10.63DD497 pKa = 3.25EE498 pKa = 4.82GGQLDD503 pKa = 4.55EE504 pKa = 5.04NNEE507 pKa = 4.5CINHH511 pKa = 6.33CKK513 pKa = 10.26DD514 pKa = 2.84QGGIIDD520 pKa = 4.27EE521 pKa = 4.89NGNCDD526 pKa = 3.84TSCKK530 pKa = 10.42DD531 pKa = 3.15SGGKK535 pKa = 9.68LDD537 pKa = 4.85EE538 pKa = 5.33NGACDD543 pKa = 3.66TSCRR547 pKa = 11.84DD548 pKa = 3.01EE549 pKa = 4.97GGIIDD554 pKa = 4.91EE555 pKa = 4.95NGNCNTTCRR564 pKa = 11.84DD565 pKa = 3.38DD566 pKa = 4.5GGILVGDD573 pKa = 4.29HH574 pKa = 7.4CDD576 pKa = 3.43TSCRR580 pKa = 11.84DD581 pKa = 3.19AGGILEE587 pKa = 5.57DD588 pKa = 5.02GICNSTCRR596 pKa = 11.84DD597 pKa = 3.26SGGKK601 pKa = 10.36LNDD604 pKa = 5.33DD605 pKa = 3.68GTCDD609 pKa = 3.67YY610 pKa = 11.26SCRR613 pKa = 11.84DD614 pKa = 2.96QGGQLDD620 pKa = 4.13EE621 pKa = 5.96NGDD624 pKa = 3.82CDD626 pKa = 4.25YY627 pKa = 11.37SCKK630 pKa = 10.69NGGGKK635 pKa = 9.67LDD637 pKa = 3.75EE638 pKa = 6.11DD639 pKa = 5.1GNCDD643 pKa = 3.5MSCKK647 pKa = 10.31EE648 pKa = 4.33NGGQLDD654 pKa = 3.85EE655 pKa = 7.07DD656 pKa = 4.76GDD658 pKa = 4.44CDD660 pKa = 5.28LSCKK664 pKa = 10.21EE665 pKa = 5.12DD666 pKa = 3.39GGKK669 pKa = 10.22LDD671 pKa = 4.6GNGDD675 pKa = 3.67CDD677 pKa = 4.07YY678 pKa = 11.24SCKK681 pKa = 10.51EE682 pKa = 3.66EE683 pKa = 4.3GGIIDD688 pKa = 4.6EE689 pKa = 4.92SGNCNTTCKK698 pKa = 10.55DD699 pKa = 3.06SGGQIIDD706 pKa = 3.76GEE708 pKa = 4.54CNYY711 pKa = 10.91GCIEE715 pKa = 4.18VGGVVIDD722 pKa = 4.55GEE724 pKa = 4.7CDD726 pKa = 3.43TSCVDD731 pKa = 4.21SGGILDD737 pKa = 5.01GDD739 pKa = 4.47GNCDD743 pKa = 3.22RR744 pKa = 11.84SCIEE748 pKa = 3.85SGGVLEE754 pKa = 6.27DD755 pKa = 4.18GACNTTCRR763 pKa = 11.84DD764 pKa = 3.03SGGKK768 pKa = 10.32LNVDD772 pKa = 4.18GTCDD776 pKa = 3.38TSCRR780 pKa = 11.84DD781 pKa = 3.54DD782 pKa = 4.35GGMLVEE788 pKa = 4.61GQCDD792 pKa = 4.04YY793 pKa = 11.14QCKK796 pKa = 8.86EE797 pKa = 3.77AGGILEE803 pKa = 5.3DD804 pKa = 4.58GEE806 pKa = 5.47CVFPPTSSSTSEE818 pKa = 4.07TSSTTDD824 pKa = 3.08QSSSQSDD831 pKa = 3.59DD832 pKa = 3.55SSVEE836 pKa = 4.18SSSTPMDD843 pKa = 3.31SSTIEE848 pKa = 4.05SSSSEE853 pKa = 4.05IITSEE858 pKa = 4.19SEE860 pKa = 4.28SEE862 pKa = 4.38SVPIASSSSEE872 pKa = 3.83VMTSEE877 pKa = 4.71SEE879 pKa = 4.33SEE881 pKa = 4.4SIPILTSSSEE891 pKa = 3.85IPIASSSSEE900 pKa = 3.74IIIPEE905 pKa = 4.16SEE907 pKa = 4.3SEE909 pKa = 4.46SVPVASSSSEE919 pKa = 3.71IPVASSSSEE928 pKa = 3.72IIIPEE933 pKa = 4.16SEE935 pKa = 4.34SEE937 pKa = 4.44SVPIASSSSEE947 pKa = 3.77IPVASSSSEE956 pKa = 3.72IIIPEE961 pKa = 4.18SEE963 pKa = 4.29SEE965 pKa = 4.35SIPIEE970 pKa = 4.36STSSEE975 pKa = 4.1AVSSRR980 pKa = 11.84SEE982 pKa = 4.0SDD984 pKa = 2.79SSYY987 pKa = 9.35PTSTPTTTTSTTWPNPIQPTTSNSSPIVSSSTEE1020 pKa = 3.83TPGIAEE1026 pKa = 4.02SSSRR1030 pKa = 11.84ISDD1033 pKa = 3.81LEE1035 pKa = 3.9SSRR1038 pKa = 11.84RR1039 pKa = 11.84TSILGDD1045 pKa = 3.14DD1046 pKa = 3.92RR1047 pKa = 11.84TRR1049 pKa = 11.84TRR1051 pKa = 11.84TTITSTITEE1060 pKa = 4.73DD1061 pKa = 3.52GQIITITTTVTGFVPEE1077 pKa = 4.24PTGEE1081 pKa = 4.24TEE1083 pKa = 4.82GNGSDD1088 pKa = 5.49DD1089 pKa = 4.14EE1090 pKa = 4.46NLEE1093 pKa = 4.1NPIEE1097 pKa = 4.34NNTDD1101 pKa = 2.97EE1102 pKa = 5.07NEE1104 pKa = 4.2FVDD1107 pKa = 5.76PEE1109 pKa = 4.24FTDD1112 pKa = 6.26DD1113 pKa = 5.61IPDD1116 pKa = 4.17DD1117 pKa = 3.94PAGPEE1122 pKa = 4.07DD1123 pKa = 4.06NGNGPVNPEE1132 pKa = 3.76QGNDD1136 pKa = 3.34NDD1138 pKa = 4.42PVNLEE1143 pKa = 3.96DD1144 pKa = 4.28SGNNGAVNPEE1154 pKa = 3.77QAPVNDD1160 pKa = 4.36EE1161 pKa = 4.64DD1162 pKa = 4.9NGGNDD1167 pKa = 3.95PVNPEE1172 pKa = 3.53QDD1174 pKa = 3.86NNNGPANPGQDD1185 pKa = 3.3NTNGSSNSDD1194 pKa = 3.35QIDD1197 pKa = 3.89NNPPTPEE1204 pKa = 3.88EE1205 pKa = 3.83NAGDD1209 pKa = 4.05GNSNGNDD1216 pKa = 3.42PADD1219 pKa = 3.84PSRR1222 pKa = 11.84RR1223 pKa = 11.84TSILGDD1229 pKa = 3.2EE1230 pKa = 4.64RR1231 pKa = 11.84TRR1233 pKa = 11.84ASPGGTSQPTGANGNVNGNSPGANVNGGGTGNSNNNNNNNNNNNNNNNNGNAPNGGDD1290 pKa = 4.24GSNGDD1295 pKa = 3.97ANQGPSRR1302 pKa = 11.84RR1303 pKa = 11.84TSLLGDD1309 pKa = 3.27EE1310 pKa = 4.53RR1311 pKa = 11.84TRR1313 pKa = 11.84AGQAAPTGGSSPNNGVAGDD1332 pKa = 3.66TSNNGGAIVSQQVDD1346 pKa = 3.47DD1347 pKa = 5.02GGAGSPRR1354 pKa = 11.84RR1355 pKa = 11.84TSILGDD1361 pKa = 3.18VRR1363 pKa = 11.84SRR1365 pKa = 11.84TTLNGEE1371 pKa = 4.05VLNFEE1376 pKa = 4.37GSGVRR1381 pKa = 11.84RR1382 pKa = 11.84AVAGNLALPLMMVGLVFNLL1401 pKa = 3.56

Molecular weight:
148.1 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|F2Z629|F2Z629_CANGA Ribosomal protein L37 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CAGL0B01203g PE=3 SV=1
MM1 pKa = 7.82PAQKK5 pKa = 10.31SFKK8 pKa = 10.07IKK10 pKa = 10.38QKK12 pKa = 9.96LAKK15 pKa = 9.88AKK17 pKa = 9.79KK18 pKa = 8.92QNRR21 pKa = 11.84TLPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TNNTIRR36 pKa = 11.84YY37 pKa = 5.73NAKK40 pKa = 8.47RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.01WRR45 pKa = 11.84RR46 pKa = 11.84TKK48 pKa = 10.52MNII51 pKa = 3.1

Molecular weight:
6.35 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5200

1

5201

2635782

34

4880

506.8

57.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.532 ± 0.031

1.161 ± 0.013

6.163 ± 0.028

6.76 ± 0.036

4.183 ± 0.025

5.247 ± 0.045

2.11 ± 0.013

6.523 ± 0.029

7.301 ± 0.035

9.315 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.211 ± 0.013

6.035 ± 0.028

4.25 ± 0.028

3.928 ± 0.027

4.435 ± 0.022

8.682 ± 0.058

5.852 ± 0.041

5.833 ± 0.024

0.991 ± 0.009

3.488 ± 0.021

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski