Capybara microvirus Cap1_SP_217

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W867|A0A4P8W867_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_217 OX=2585412 PE=4 SV=1
MM1 pKa = 7.63KK2 pKa = 10.63LKK4 pKa = 8.76TQKK7 pKa = 9.29ATYY10 pKa = 9.13FSCDD14 pKa = 2.92GEE16 pKa = 4.59FNDD19 pKa = 4.76EE20 pKa = 4.36ASMSQPNLAYY30 pKa = 10.33SIKK33 pKa = 10.67DD34 pKa = 3.28LLEE37 pKa = 3.88RR38 pKa = 11.84AKK40 pKa = 10.72RR41 pKa = 11.84GIAPPDD47 pKa = 3.35FTADD51 pKa = 3.3YY52 pKa = 10.99DD53 pKa = 4.58GYY55 pKa = 9.41TSPLTGDD62 pKa = 3.43TGLDD66 pKa = 3.16MDD68 pKa = 5.86ADD70 pKa = 4.49FDD72 pKa = 3.9PTNRR76 pKa = 11.84IGIDD80 pKa = 3.47FDD82 pKa = 3.77EE83 pKa = 4.8LAEE86 pKa = 4.1ISADD90 pKa = 2.94GRR92 pKa = 11.84KK93 pKa = 9.58QMEE96 pKa = 4.22EE97 pKa = 3.54RR98 pKa = 11.84RR99 pKa = 11.84AEE101 pKa = 3.82YY102 pKa = 10.35LKK104 pKa = 10.77RR105 pKa = 11.84LEE107 pKa = 4.2EE108 pKa = 3.95QARR111 pKa = 11.84AAAAPPADD119 pKa = 4.43SPAEE123 pKa = 4.07PPAAEE128 pKa = 3.96

Molecular weight: 14.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W867|A0A4P8W867_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_217 OX=2585412 PE=4 SV=1
MM1 pKa = 7.78EE2 pKa = 4.99SGKK5 pKa = 7.85TQFFQKK11 pKa = 9.95KK12 pKa = 8.14KK13 pKa = 10.26KK14 pKa = 9.81KK15 pKa = 9.55IKK17 pKa = 9.42PSHH20 pKa = 5.3TRR22 pKa = 11.84AIIILLEE29 pKa = 4.27NNNRR33 pKa = 11.84PLTPNTKK40 pKa = 9.0MAGILSTFLQGMFDD54 pKa = 3.89RR55 pKa = 11.84VSQNYY60 pKa = 10.39NYY62 pKa = 9.13TLQMDD67 pKa = 4.94LANKK71 pKa = 9.45EE72 pKa = 3.99FAQNLEE78 pKa = 3.76MWNLQNEE85 pKa = 4.57YY86 pKa = 10.39NSPKK90 pKa = 10.71AQMEE94 pKa = 4.25RR95 pKa = 11.84LRR97 pKa = 11.84EE98 pKa = 4.11AGLNPNLVYY107 pKa = 10.86GSGASTGNASSAPSYY122 pKa = 10.86SRR124 pKa = 11.84PNYY127 pKa = 9.73QYY129 pKa = 11.37QNVIKK134 pKa = 10.84NLDD137 pKa = 3.59LQSAVIEE144 pKa = 4.0LLKK147 pKa = 11.0SKK149 pKa = 11.15EE150 pKa = 3.99EE151 pKa = 4.11LEE153 pKa = 5.07LMRR156 pKa = 11.84EE157 pKa = 4.07QQKK160 pKa = 10.88SIEE163 pKa = 4.35SQTQLRR169 pKa = 11.84QSQYY173 pKa = 10.03NAQVLSNSMAQNQANAYY190 pKa = 8.58YY191 pKa = 10.34LYY193 pKa = 11.04SLDD196 pKa = 3.52SRR198 pKa = 11.84YY199 pKa = 10.79NGNPPADD206 pKa = 3.69EE207 pKa = 4.26VQGLLLNTHH216 pKa = 5.82GRR218 pKa = 11.84GTTDD222 pKa = 3.52LDD224 pKa = 4.01ALRR227 pKa = 11.84KK228 pKa = 9.78SPWYY232 pKa = 9.06NQARR236 pKa = 11.84LGQWTADD243 pKa = 3.37KK244 pKa = 11.4AMQQYY249 pKa = 11.29LNLSEE254 pKa = 4.14QNKK257 pKa = 8.05MLQYY261 pKa = 11.09QNLLNANQQQLFGNPSSMEE280 pKa = 3.83GGQFIWALINALFGGKK296 pKa = 10.27GIINKK301 pKa = 8.77FF302 pKa = 3.25

Molecular weight: 34.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1295

71

523

259.0

29.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.413 ± 1.154

1.236 ± 0.619

5.251 ± 1.029

6.641 ± 0.563

4.788 ± 0.732

6.409 ± 0.501

2.394 ± 0.755

4.865 ± 0.429

5.714 ± 1.016

9.035 ± 1.076

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.78 ± 0.289

6.178 ± 1.459

4.788 ± 0.641

5.946 ± 1.489

5.405 ± 0.743

6.1 ± 0.953

4.942 ± 0.44

3.784 ± 0.896

1.544 ± 0.313

4.788 ± 0.812
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski