Wuhan house centipede virus 6

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KGS6|A0A1L3KGS6_9VIRU Uncharacterized protein OS=Wuhan house centipede virus 6 OX=1923710 PE=4 SV=1
MM1 pKa = 7.29SQMLFNTCDD10 pKa = 3.45VVKK13 pKa = 10.08STFLMMRR20 pKa = 11.84TYY22 pKa = 10.53PKK24 pKa = 9.34TVLAITVTSYY34 pKa = 11.97GLVKK38 pKa = 10.56LIKK41 pKa = 10.16HH42 pKa = 5.59HH43 pKa = 6.88AKK45 pKa = 10.43LYY47 pKa = 8.12NQQNPFEE54 pKa = 4.68YY55 pKa = 10.14IPSEE59 pKa = 3.99EE60 pKa = 4.43TNWLLVRR67 pKa = 11.84QVRR70 pKa = 11.84NVLKK74 pKa = 10.2HH75 pKa = 5.04QYY77 pKa = 10.7AAVKK81 pKa = 8.49YY82 pKa = 10.61QMMTVGGLYY91 pKa = 7.79QTNVKK96 pKa = 9.81QLSEE100 pKa = 4.58EE101 pKa = 3.93IEE103 pKa = 3.89KK104 pKa = 10.16TIIRR108 pKa = 11.84KK109 pKa = 9.13PDD111 pKa = 3.41LRR113 pKa = 11.84PTLVPNGDD121 pKa = 4.36SIDD124 pKa = 4.21IIPVNSMHH132 pKa = 6.25SHH134 pKa = 6.55PASAQFRR141 pKa = 11.84SSANSYY147 pKa = 11.33LNDD150 pKa = 3.53CVVRR154 pKa = 11.84AGYY157 pKa = 9.99RR158 pKa = 11.84PYY160 pKa = 10.68NISKK164 pKa = 9.92SRR166 pKa = 11.84RR167 pKa = 11.84DD168 pKa = 3.3IEE170 pKa = 4.35DD171 pKa = 3.32GCRR174 pKa = 11.84YY175 pKa = 9.88FYY177 pKa = 10.64HH178 pKa = 7.18SKK180 pKa = 10.69DD181 pKa = 3.61LSIKK185 pKa = 9.95YY186 pKa = 10.62SNDD189 pKa = 3.28KK190 pKa = 11.0IEE192 pKa = 4.55DD193 pKa = 3.33QSVFIMTDD201 pKa = 2.15VDD203 pKa = 4.4YY204 pKa = 11.26YY205 pKa = 11.63VDD207 pKa = 3.46MPRR210 pKa = 11.84WLKK213 pKa = 10.38LFRR216 pKa = 11.84PIVMYY221 pKa = 9.65TLSPTKK227 pKa = 10.45LSCSGPNDD235 pKa = 3.3KK236 pKa = 11.17AEE238 pKa = 3.73YY239 pKa = 10.16RR240 pKa = 11.84FNIDD244 pKa = 3.05GNVVHH249 pKa = 5.97YY250 pKa = 9.81HH251 pKa = 4.66VSGGGEE257 pKa = 3.98YY258 pKa = 8.71THH260 pKa = 6.48QLWNYY265 pKa = 8.41TGDD268 pKa = 3.41TVTCVDD274 pKa = 4.64DD275 pKa = 5.6DD276 pKa = 4.96GNLLTFDD283 pKa = 3.4IEE285 pKa = 4.17QRR287 pKa = 11.84KK288 pKa = 9.09VKK290 pKa = 10.46GDD292 pKa = 3.48EE293 pKa = 3.68QHH295 pKa = 6.71RR296 pKa = 11.84LIWLLPRR303 pKa = 11.84SKK305 pKa = 9.45VTNPLWHH312 pKa = 6.53YY313 pKa = 11.1LRR315 pKa = 11.84LDD317 pKa = 3.41WEE319 pKa = 4.45NNLLKK324 pKa = 10.69RR325 pKa = 11.84KK326 pKa = 10.35DD327 pKa = 3.44MTLKK331 pKa = 10.5GFNYY335 pKa = 10.05LLEE338 pKa = 5.11PIEE341 pKa = 5.06DD342 pKa = 3.77NLSIGLIGTKK352 pKa = 10.29YY353 pKa = 10.44SVEE356 pKa = 4.14IPGKK360 pKa = 9.29LYY362 pKa = 9.55EE363 pKa = 4.73AIRR366 pKa = 11.84IRR368 pKa = 11.84LAEE371 pKa = 4.08KK372 pKa = 9.39EE373 pKa = 4.13ATVFVSDD380 pKa = 3.63VEE382 pKa = 4.6RR383 pKa = 11.84MLKK386 pKa = 9.04EE387 pKa = 4.35AKK389 pKa = 9.19HH390 pKa = 4.97QSYY393 pKa = 7.97VTDD396 pKa = 3.7APILFKK402 pKa = 10.99CFAVDD407 pKa = 3.89VVFDD411 pKa = 4.15KK412 pKa = 11.55NVVKK416 pKa = 10.09TSNFAVTYY424 pKa = 9.0QAIPRR429 pKa = 11.84HH430 pKa = 5.69GALSTEE436 pKa = 4.67DD437 pKa = 3.87GNNPGQTTTSPLTSNPALFASKK459 pKa = 10.56GYY461 pKa = 9.96NADD464 pKa = 3.52KK465 pKa = 11.05ACIEE469 pKa = 4.0GRR471 pKa = 11.84IHH473 pKa = 7.31KK474 pKa = 9.31VANNKK479 pKa = 8.84KK480 pKa = 8.52WSKK483 pKa = 10.36KK484 pKa = 6.7YY485 pKa = 10.1HH486 pKa = 6.39DD487 pKa = 4.1YY488 pKa = 11.25ARR490 pKa = 11.84EE491 pKa = 4.21FIDD494 pKa = 3.57RR495 pKa = 11.84LVPKK499 pKa = 9.76RR500 pKa = 11.84YY501 pKa = 9.68RR502 pKa = 11.84GTGTPLSIGEE512 pKa = 3.83VDD514 pKa = 3.64LRR516 pKa = 11.84QEE518 pKa = 3.99KK519 pKa = 9.2VAQRR523 pKa = 11.84GRR525 pKa = 11.84FKK527 pKa = 10.7QVAPMMSLDD536 pKa = 3.6AGNAIKK542 pKa = 10.75AFIKK546 pKa = 10.04TEE548 pKa = 4.23TYY550 pKa = 11.13ASAKK554 pKa = 8.85PPRR557 pKa = 11.84NISTMSPEE565 pKa = 3.97LTIQMSAYY573 pKa = 8.67TLVFANILKK582 pKa = 8.5THH584 pKa = 6.9DD585 pKa = 3.56WYY587 pKa = 11.54CPGKK591 pKa = 10.22KK592 pKa = 9.59PRR594 pKa = 11.84DD595 pKa = 3.49IIKK598 pKa = 10.53RR599 pKa = 11.84LAHH602 pKa = 5.07VMKK605 pKa = 10.73AEE607 pKa = 3.94EE608 pKa = 4.42TEE610 pKa = 4.08DD611 pKa = 3.96VEE613 pKa = 4.9EE614 pKa = 5.2GDD616 pKa = 4.15YY617 pKa = 11.08TCLDD621 pKa = 3.59GTQSEE626 pKa = 5.13EE627 pKa = 4.01YY628 pKa = 10.56ARR630 pKa = 11.84NLLLPAYY637 pKa = 7.78MQYY640 pKa = 10.98LAPEE644 pKa = 4.34HH645 pKa = 6.0RR646 pKa = 11.84TMFKK650 pKa = 10.78DD651 pKa = 4.22LYY653 pKa = 10.04KK654 pKa = 10.46KK655 pKa = 10.45VYY657 pKa = 8.61KK658 pKa = 10.29QHH660 pKa = 6.28ATTSTGVSYY669 pKa = 11.1DD670 pKa = 2.81PGYY673 pKa = 8.72TVRR676 pKa = 11.84SGSPITTQAGTLANAFNVYY695 pKa = 10.06SALRR699 pKa = 11.84NMGYY703 pKa = 10.15VPDD706 pKa = 4.46EE707 pKa = 4.36AFDD710 pKa = 3.84MIGAIFGDD718 pKa = 4.47DD719 pKa = 3.57SCNPNYY725 pKa = 10.15KK726 pKa = 10.39GQFHH730 pKa = 7.0LFIEE734 pKa = 4.74QVAKK738 pKa = 10.41DD739 pKa = 3.55LGMIYY744 pKa = 10.34KK745 pKa = 10.57SNLRR749 pKa = 11.84PRR751 pKa = 11.84GEE753 pKa = 3.9PLLFLGRR760 pKa = 11.84YY761 pKa = 8.42FVDD764 pKa = 4.86PPTTDD769 pKa = 4.07DD770 pKa = 4.5SYY772 pKa = 12.1ADD774 pKa = 3.72PLRR777 pKa = 11.84TIGKK781 pKa = 8.69LHH783 pKa = 6.91ASTNKK788 pKa = 10.22SVTKK792 pKa = 10.09EE793 pKa = 3.26QAAANKK799 pKa = 9.98ALGYY803 pKa = 10.55LSTDD807 pKa = 2.8RR808 pKa = 11.84LTPIIGTWAARR819 pKa = 11.84VIQLTKK825 pKa = 9.98IRR827 pKa = 11.84TMKK830 pKa = 10.64GGTGEE835 pKa = 4.06EE836 pKa = 4.31QYY838 pKa = 10.79KK839 pKa = 10.71CSNAWPQKK847 pKa = 9.55DD848 pKa = 3.27EE849 pKa = 4.05TRR851 pKa = 11.84IRR853 pKa = 11.84EE854 pKa = 4.26CMATTLGITTAEE866 pKa = 4.74LIEE869 pKa = 4.53LDD871 pKa = 3.52KK872 pKa = 10.96KK873 pKa = 10.5IRR875 pKa = 11.84SVDD878 pKa = 3.65GLDD881 pKa = 3.45HH882 pKa = 6.71FPVIFDD888 pKa = 3.39TAYY891 pKa = 9.9KK892 pKa = 7.8HH893 pKa = 5.02TQVAVVDD900 pKa = 4.11GDD902 pKa = 4.16LVCTDD907 pKa = 3.42LHH909 pKa = 7.72QDD911 pKa = 3.21IEE913 pKa = 4.78PIHH916 pKa = 7.06DD917 pKa = 3.59EE918 pKa = 4.42SEE920 pKa = 4.3PKK922 pKa = 10.43ASCSGIQSPSSSHH935 pKa = 6.3RR936 pKa = 11.84SCSAKK941 pKa = 9.48ATEE944 pKa = 4.16RR945 pKa = 11.84PKK947 pKa = 10.76PGFTEE952 pKa = 4.84RR953 pKa = 11.84SFKK956 pKa = 10.3TSGRR960 pKa = 11.84RR961 pKa = 11.84ATGKK965 pKa = 9.54GHH967 pKa = 7.1PNRR970 pKa = 11.84IRR972 pKa = 11.84PNTRR976 pKa = 11.84KK977 pKa = 10.04SNRR980 pKa = 11.84VDD982 pKa = 3.26PRR984 pKa = 11.84DD985 pKa = 3.75DD986 pKa = 3.44VPRR989 pKa = 11.84TDD991 pKa = 3.32GRR993 pKa = 11.84RR994 pKa = 11.84INN996 pKa = 3.54

Molecular weight: 113.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KGY7|A0A1L3KGY7_9VIRU Capsid protein OS=Wuhan house centipede virus 6 OX=1923710 PE=3 SV=1
MM1 pKa = 7.38VNKK4 pKa = 10.16NNQKK8 pKa = 10.18ARR10 pKa = 11.84NGKK13 pKa = 6.48TKK15 pKa = 10.49RR16 pKa = 11.84KK17 pKa = 7.1TRR19 pKa = 11.84NGQLQATRR27 pKa = 11.84EE28 pKa = 4.5GPASSRR34 pKa = 11.84SGMRR38 pKa = 11.84TGIPRR43 pKa = 11.84IRR45 pKa = 11.84NRR47 pKa = 11.84DD48 pKa = 3.36PYY50 pKa = 10.98SIEE53 pKa = 3.86VCNTEE58 pKa = 3.2IAMTITGTAAGGIIPAGGNIKK79 pKa = 9.9IMRR82 pKa = 11.84FDD84 pKa = 4.57DD85 pKa = 4.04SSTGNALNNKK95 pKa = 8.67HH96 pKa = 6.63WITKK100 pKa = 10.21LGLAYY105 pKa = 10.31DD106 pKa = 3.63KK107 pKa = 10.98FVIEE111 pKa = 4.23EE112 pKa = 4.25LSMKK116 pKa = 9.68FVPSLPFTAAGMSAMYY132 pKa = 10.15FDD134 pKa = 5.44SDD136 pKa = 4.01PSRR139 pKa = 11.84TTPPTSVASVSGDD152 pKa = 2.9MRR154 pKa = 11.84AVSKK158 pKa = 10.47QIYY161 pKa = 10.22AEE163 pKa = 4.41LPLKK167 pKa = 10.18VLRR170 pKa = 11.84NQLNRR175 pKa = 11.84LPQYY179 pKa = 7.97EE180 pKa = 4.42TFPGSGDD187 pKa = 3.31TGVATVGSINFVHH200 pKa = 7.51DD201 pKa = 4.93SIAMPNASTTGNITIGNVWMTYY223 pKa = 9.99RR224 pKa = 11.84IRR226 pKa = 11.84LINPSNAVAA235 pKa = 4.28

Molecular weight: 25.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1387

156

996

462.3

51.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.705 ± 0.677

1.154 ± 0.467

5.84 ± 0.944

4.398 ± 0.959

2.812 ± 0.702

6.273 ± 0.875

2.235 ± 0.653

5.984 ± 0.614

6.2 ± 1.607

7.282 ± 0.797

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.596 ± 0.623

5.696 ± 1.303

5.552 ± 0.308

3.317 ± 0.348

6.921 ± 1.333

6.921 ± 0.625

8.435 ± 1.36

6.273 ± 0.385

0.937 ± 0.092

4.47 ± 0.805
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski