Stemphylium lycopersici mycovirus

Taxonomy: Viruses; Riboviria; unclassified Riboviria

Average proteome isoelectric point is 6.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A346TJG4|A0A346TJG4_9VIRU Uncharacterized protein OS=Stemphylium lycopersici mycovirus OX=2499625 PE=4 SV=1
MM1 pKa = 7.32FCDD4 pKa = 4.81FEE6 pKa = 5.92PDD8 pKa = 3.45FPVFIPFLLRR18 pKa = 11.84NVEE21 pKa = 4.12SRR23 pKa = 11.84VFSAPALLTAQASGGFGGPKK43 pKa = 9.44SVRR46 pKa = 11.84VSIAHH51 pKa = 6.49FPLAAPDD58 pKa = 3.8AEE60 pKa = 4.08ALEE63 pKa = 4.74EE64 pKa = 4.28EE65 pKa = 4.98SCSGTAGQDD74 pKa = 3.39VFPVGVKK81 pKa = 8.99STVWCGGAVCSGSCGFDD98 pKa = 3.51GSCGISDD105 pKa = 3.23VDD107 pKa = 3.87EE108 pKa = 5.02RR109 pKa = 11.84GEE111 pKa = 4.5GYY113 pKa = 9.91FASTSFSSLVSVALAEE129 pKa = 4.0LGYY132 pKa = 10.71LGEE135 pKa = 4.26LCRR138 pKa = 11.84VQLSVGGMRR147 pKa = 11.84LDD149 pKa = 3.33ADD151 pKa = 3.81FRR153 pKa = 11.84GGARR157 pKa = 11.84PQTTVFDD164 pKa = 4.25AFAAEE169 pKa = 4.46AFFPPSLEE177 pKa = 3.96EE178 pKa = 4.04VVVEE182 pKa = 4.61DD183 pKa = 3.62VAPAKK188 pKa = 10.57VGAPADD194 pKa = 3.81IPGSMPLDD202 pKa = 3.54YY203 pKa = 10.8VVSLAEE209 pKa = 4.46TILPPAYY216 pKa = 10.51VEE218 pKa = 4.01AAKK221 pKa = 10.62ADD223 pKa = 3.81AVSLVPVSLPPPADD237 pKa = 3.72GPVLGVDD244 pKa = 4.19PGPAIPCVVNALFDD258 pKa = 3.98CAEE261 pKa = 4.45GVAQSTPGPVFAGDD275 pKa = 3.73CDD277 pKa = 4.33GEE279 pKa = 4.02IDD281 pKa = 4.07ARR283 pKa = 11.84LAVLQAGGTLPRR295 pKa = 11.84GCYY298 pKa = 10.3SIVGDD303 pKa = 4.24HH304 pKa = 5.95NWFNILRR311 pKa = 11.84GLARR315 pKa = 11.84WFASSGVSVRR325 pKa = 11.84GARR328 pKa = 11.84MDD330 pKa = 3.91LLLGGLSVARR340 pKa = 11.84DD341 pKa = 3.37DD342 pKa = 3.9RR343 pKa = 11.84LRR345 pKa = 11.84ALRR348 pKa = 11.84LLRR351 pKa = 11.84FLGLGRR357 pKa = 11.84GGDD360 pKa = 3.6EE361 pKa = 4.17AGVGDD366 pKa = 4.15RR367 pKa = 11.84VLFPPCARR375 pKa = 11.84AVVDD379 pKa = 4.19ARR381 pKa = 11.84LAYY384 pKa = 9.9LVWDD388 pKa = 4.74WIGGSSAADD397 pKa = 3.12

Molecular weight:
41.11 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A346TJG2|A0A346TJG2_9VIRU Coat protein OS=Stemphylium lycopersici mycovirus OX=2499625 PE=4 SV=1
MM1 pKa = 7.77RR2 pKa = 11.84SDD4 pKa = 4.32KK5 pKa = 11.17SLLLLGFRR13 pKa = 11.84NAGWLRR19 pKa = 11.84AQGEE23 pKa = 4.53HH24 pKa = 7.33PDD26 pKa = 3.74LGAIPKK32 pKa = 9.82RR33 pKa = 11.84AFVPEE38 pKa = 4.18PEE40 pKa = 4.66EE41 pKa = 4.21VDD43 pKa = 3.31ACLKK47 pKa = 10.66GIEE50 pKa = 4.9DD51 pKa = 3.7GWGDD55 pKa = 3.62GAFWCPTVIGSAFPVFFVLSNEE77 pKa = 3.84TRR79 pKa = 11.84NAFCHH84 pKa = 6.03SFSSVGGDD92 pKa = 3.66VNWLTFGLTDD102 pKa = 4.82ARR104 pKa = 11.84TLLYY108 pKa = 10.14RR109 pKa = 11.84RR110 pKa = 11.84PQVCVVAKK118 pKa = 9.45PRR120 pKa = 11.84PCVAYY125 pKa = 10.34HH126 pKa = 7.1RR127 pKa = 11.84DD128 pKa = 3.27LSSIARR134 pKa = 11.84VLRR137 pKa = 11.84YY138 pKa = 9.55GVLNSDD144 pKa = 4.59HH145 pKa = 6.98KK146 pKa = 11.5LCDD149 pKa = 3.33AYY151 pKa = 10.06TDD153 pKa = 4.46FVRR156 pKa = 11.84SPVARR161 pKa = 11.84TEE163 pKa = 4.35EE164 pKa = 3.94VWGTLGAYY172 pKa = 8.52PWGDD176 pKa = 3.84LDD178 pKa = 4.03TLVGQSTRR186 pKa = 11.84AEE188 pKa = 3.82YY189 pKa = 10.75DD190 pKa = 3.2AVKK193 pKa = 10.47DD194 pKa = 3.55AAVVGFLDD202 pKa = 4.04RR203 pKa = 11.84LWGKK207 pKa = 10.21KK208 pKa = 9.15RR209 pKa = 11.84GKK211 pKa = 9.74GAPRR215 pKa = 11.84DD216 pKa = 3.38RR217 pKa = 11.84KK218 pKa = 10.16VRR220 pKa = 11.84AKK222 pKa = 10.82AAMAWGDD229 pKa = 3.14ARR231 pKa = 11.84LWSRR235 pKa = 11.84EE236 pKa = 3.58VSFKK240 pKa = 10.33RR241 pKa = 11.84RR242 pKa = 11.84HH243 pKa = 5.67YY244 pKa = 10.58YY245 pKa = 10.41DD246 pKa = 3.03VATFLCVMDD255 pKa = 4.53EE256 pKa = 4.26VWGSRR261 pKa = 11.84DD262 pKa = 3.05VALRR266 pKa = 11.84GGATNAEE273 pKa = 4.37AGLQVGSFRR282 pKa = 11.84KK283 pKa = 9.29AVRR286 pKa = 11.84MVLSEE291 pKa = 4.42LVMGPASYY299 pKa = 10.63EE300 pKa = 3.8RR301 pKa = 11.84LYY303 pKa = 10.6LTIFWVFSTRR313 pKa = 11.84WWPSLVPVLIRR324 pKa = 11.84YY325 pKa = 7.18GTLGMSDD332 pKa = 4.34DD333 pKa = 4.98EE334 pKa = 4.24YY335 pKa = 10.98TAIHH339 pKa = 6.54KK340 pKa = 8.84EE341 pKa = 3.35ITAVVTSTWMVPGTCRR357 pKa = 11.84QHH359 pKa = 5.91QFSANFLNAEE369 pKa = 4.57DD370 pKa = 3.7LTGWSDD376 pKa = 3.47RR377 pKa = 11.84DD378 pKa = 3.67SLKK381 pKa = 11.22GGVCTEE387 pKa = 4.36IIKK390 pKa = 10.32FALATFEE397 pKa = 3.79YY398 pKa = 10.21RR399 pKa = 11.84ADD401 pKa = 3.47VRR403 pKa = 11.84GGGGEE408 pKa = 3.66RR409 pKa = 11.84GMPIIAKK416 pKa = 9.13EE417 pKa = 4.15GSPSEE422 pKa = 3.92YY423 pKa = 9.89LSRR426 pKa = 11.84YY427 pKa = 8.1RR428 pKa = 11.84AAMDD432 pKa = 3.2QLLRR436 pKa = 11.84PMYY439 pKa = 10.54AKK441 pKa = 10.69YY442 pKa = 9.87SANMTDD448 pKa = 4.11LRR450 pKa = 11.84SHH452 pKa = 5.46MEE454 pKa = 4.04KK455 pKa = 10.46RR456 pKa = 11.84MAWMSGGAVGRR467 pKa = 11.84RR468 pKa = 11.84AKK470 pKa = 10.32EE471 pKa = 3.52LLGPGIAPPGSSKK484 pKa = 11.08AYY486 pKa = 8.05VASRR490 pKa = 11.84ADD492 pKa = 3.6ADD494 pKa = 3.57QLTRR498 pKa = 11.84DD499 pKa = 3.45WGEE502 pKa = 3.46MRR504 pKa = 11.84IEE506 pKa = 3.98VGGKK510 pKa = 8.57GNEE513 pKa = 4.03RR514 pKa = 11.84GSEE517 pKa = 3.96RR518 pKa = 11.84TLLATDD524 pKa = 4.29LRR526 pKa = 11.84DD527 pKa = 3.66QVSEE531 pKa = 4.39SYY533 pKa = 10.83LLHH536 pKa = 6.56AFKK539 pKa = 10.77NRR541 pKa = 11.84YY542 pKa = 8.45GLIGVDD548 pKa = 3.33VGEE551 pKa = 4.82TPVEE555 pKa = 3.84MFKK558 pKa = 10.72RR559 pKa = 11.84HH560 pKa = 4.39VTVASATDD568 pKa = 3.54VPMSFHH574 pKa = 6.04GRR576 pKa = 11.84EE577 pKa = 4.17KK578 pKa = 10.67KK579 pKa = 10.54VLAAWDD585 pKa = 3.71YY586 pKa = 11.34SKK588 pKa = 10.67WDD590 pKa = 3.49HH591 pKa = 6.43HH592 pKa = 7.34VMLAEE597 pKa = 4.26RR598 pKa = 11.84LLLVQVMRR606 pKa = 11.84DD607 pKa = 3.31LVLEE611 pKa = 4.05YY612 pKa = 10.61VQRR615 pKa = 11.84DD616 pKa = 4.26DD617 pKa = 5.05IRR619 pKa = 11.84VDD621 pKa = 3.28MLKK624 pKa = 10.45EE625 pKa = 3.87LDD627 pKa = 3.77VLEE630 pKa = 4.61SSHH633 pKa = 6.51RR634 pKa = 11.84VAIYY638 pKa = 10.22RR639 pKa = 11.84SRR641 pKa = 11.84AYY643 pKa = 10.61ADD645 pKa = 3.36ARR647 pKa = 11.84YY648 pKa = 7.8TDD650 pKa = 3.58QVDD653 pKa = 3.02ALIRR657 pKa = 11.84DD658 pKa = 3.91GVKK661 pKa = 10.55AGFKK665 pKa = 9.59GQAVRR670 pKa = 11.84LSADD674 pKa = 3.22QVRR677 pKa = 11.84ITDD680 pKa = 3.53YY681 pKa = 11.29AGQQSGRR688 pKa = 11.84RR689 pKa = 11.84STLEE693 pKa = 3.6SNTFYY698 pKa = 11.23SRR700 pKa = 11.84ARR702 pKa = 11.84LLVRR706 pKa = 11.84DD707 pKa = 3.98AEE709 pKa = 4.25LAEE712 pKa = 4.55GEE714 pKa = 4.13RR715 pKa = 11.84SVYY718 pKa = 10.47LLNRR722 pKa = 11.84ADD724 pKa = 5.15DD725 pKa = 3.64VLEE728 pKa = 4.28VYY730 pKa = 10.17RR731 pKa = 11.84AWEE734 pKa = 3.88HH735 pKa = 5.7ARR737 pKa = 11.84NAIDD741 pKa = 4.24VMLLQGHH748 pKa = 6.65KK749 pKa = 10.49ANKK752 pKa = 8.77KK753 pKa = 7.94KK754 pKa = 10.5QVVQVRR760 pKa = 11.84TGVYY764 pKa = 10.06FRR766 pKa = 11.84ILYY769 pKa = 9.9AAGSMRR775 pKa = 11.84GFPPRR780 pKa = 11.84AVYY783 pKa = 10.5ACASAGPSMAASGGFDD799 pKa = 3.15PVEE802 pKa = 4.21RR803 pKa = 11.84LSSLSGALDD812 pKa = 3.24RR813 pKa = 11.84LARR816 pKa = 11.84RR817 pKa = 11.84GSGYY821 pKa = 8.88WVARR825 pKa = 11.84ALYY828 pKa = 10.44LEE830 pKa = 4.67AEE832 pKa = 4.39DD833 pKa = 4.46YY834 pKa = 10.92YY835 pKa = 11.5RR836 pKa = 11.84DD837 pKa = 3.5VRR839 pKa = 11.84VQLAVKK845 pKa = 9.87ADD847 pKa = 2.97KK848 pKa = 9.19FTRR851 pKa = 11.84FTIPRR856 pKa = 11.84EE857 pKa = 4.02VLRR860 pKa = 11.84ASPDD864 pKa = 3.31LGGCGVLPPGNYY876 pKa = 10.44DD877 pKa = 3.08FDD879 pKa = 5.82LSIKK883 pKa = 10.13CSEE886 pKa = 3.95IVGEE890 pKa = 5.54NGRR893 pKa = 11.84LWQAVRR899 pKa = 11.84EE900 pKa = 4.14RR901 pKa = 11.84LEE903 pKa = 3.86KK904 pKa = 9.38RR905 pKa = 11.84HH906 pKa = 5.91KK907 pKa = 10.51FRR909 pKa = 11.84GLADD913 pKa = 3.78LQGSAGRR920 pKa = 11.84AFSHH924 pKa = 7.05DD925 pKa = 3.53VPLDD929 pKa = 3.67VPEE932 pKa = 4.91KK933 pKa = 10.58AWQQWQKK940 pKa = 9.36RR941 pKa = 11.84WRR943 pKa = 11.84GDD945 pKa = 2.84RR946 pKa = 11.84AAQDD950 pKa = 3.45GRR952 pKa = 11.84GEE954 pKa = 4.18LLRR957 pKa = 11.84ARR959 pKa = 11.84LMGKK963 pKa = 8.43LWRR966 pKa = 11.84YY967 pKa = 7.77KK968 pKa = 10.43RR969 pKa = 11.84SWHH972 pKa = 6.93RR973 pKa = 11.84DD974 pKa = 3.06RR975 pKa = 11.84KK976 pKa = 9.24GDD978 pKa = 3.2AWGLEE983 pKa = 4.4GFGHH987 pKa = 7.59LLSLPVDD994 pKa = 4.3FFQLSWRR1001 pKa = 11.84ILRR1004 pKa = 11.84DD1005 pKa = 3.61CPGSGEE1011 pKa = 4.17VDD1013 pKa = 2.9RR1014 pKa = 11.84LMKK1017 pKa = 10.44GVQGPPAEE1025 pKa = 4.31GMLAKK1030 pKa = 10.37LWYY1033 pKa = 10.47GLGQDD1038 pKa = 4.1VISVLGRR1045 pKa = 11.84DD1046 pKa = 3.64VLEE1049 pKa = 4.88VIQSASAPGRR1059 pKa = 11.84EE1060 pKa = 4.98FAAEE1064 pKa = 4.12WGWLPLDD1071 pKa = 3.56VRR1073 pKa = 11.84EE1074 pKa = 4.15KK1075 pKa = 10.64FLRR1078 pKa = 11.84GHH1080 pKa = 7.52LGPAGAWMNLMPASFAPWLNQAVNFVLFQAFATGVRR1116 pKa = 11.84YY1117 pKa = 9.66HH1118 pKa = 6.69GSHH1121 pKa = 6.61WLLHH1125 pKa = 5.2VRR1127 pKa = 11.84QALTGAITRR1136 pKa = 11.84QFVDD1140 pKa = 3.27ARR1142 pKa = 11.84PLVVLHH1148 pKa = 6.72

Molecular weight:
128.94 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3143

397

1148

785.8

85.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.581 ± 0.836

1.336 ± 0.309

6.841 ± 0.178

5.154 ± 0.349

3.754 ± 0.401

11.04 ± 0.843

1.973 ± 0.272

2.195 ± 0.139

2.609 ± 0.689

9.8 ± 0.572

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.004 ± 0.229

1.75 ± 0.148

5.218 ± 0.824

2.195 ± 0.349

8.559 ± 0.649

6.109 ± 0.324

3.532 ± 0.248

9.131 ± 0.388

2.418 ± 0.31

2.8 ± 0.393

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski