Apolygus lucorum (Plant bug) (Lygocoris lucorum)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Paraneoptera; Hemiptera; Prosorrhyncha; Heteroptera; Euheteroptera; Neoheteroptera;

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 21887 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6A4J2M2|A0A6A4J2M2_APOLU Uncharacterized protein OS=Apolygus lucorum OX=248454 GN=GE061_10146 PE=4 SV=1
MM1 pKa = 7.4SAGFFNFGLVSRR13 pKa = 11.84GEE15 pKa = 4.41KK16 pKa = 9.62ILHH19 pKa = 5.07QCNANKK25 pKa = 10.46SVDD28 pKa = 3.35ADD30 pKa = 3.35EE31 pKa = 6.12CYY33 pKa = 11.23DD34 pKa = 3.7HH35 pKa = 7.22LLTNDD40 pKa = 4.44EE41 pKa = 4.46ISSAADD47 pKa = 3.4NLCAALAEE55 pKa = 4.44EE56 pKa = 5.15GFLPEE61 pKa = 6.1DD62 pKa = 4.65DD63 pKa = 5.16LPTIAGSDD71 pKa = 3.11IFSNPGVLDD80 pKa = 4.18AADD83 pKa = 4.21DD84 pKa = 3.57AHH86 pKa = 7.01NNVMEE91 pKa = 5.38PGDD94 pKa = 3.55EE95 pKa = 4.04HH96 pKa = 7.57KK97 pKa = 11.05INIVPDD103 pKa = 3.59SSEE106 pKa = 4.04TTEE109 pKa = 4.13LRR111 pKa = 11.84SSYY114 pKa = 9.86EE115 pKa = 4.04LEE117 pKa = 4.95DD118 pKa = 5.41ADD120 pKa = 3.93MDD122 pKa = 4.27QNDD125 pKa = 3.23VEE127 pKa = 4.63YY128 pKa = 10.79VVEE131 pKa = 4.61SEE133 pKa = 4.44QEE135 pKa = 3.94LEE137 pKa = 4.01ATQLEE142 pKa = 4.98VCANN146 pKa = 3.59

Molecular weight: 15.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6A4KCV8|A0A6A4KCV8_APOLU Uncharacterized protein OS=Apolygus lucorum OX=248454 GN=GE061_11958 PE=3 SV=1
CC1 pKa = 7.02AAWGIARR8 pKa = 11.84GIAWGIAWGIARR20 pKa = 11.84GIARR24 pKa = 11.84GIARR28 pKa = 11.84GIAWGIARR36 pKa = 11.84GIARR40 pKa = 11.84GIARR44 pKa = 11.84GIARR48 pKa = 11.84GIARR52 pKa = 11.84GIARR56 pKa = 11.84GIARR60 pKa = 11.84GIARR64 pKa = 11.84GIAWGIAWGIARR76 pKa = 11.84GIAWGIARR84 pKa = 11.84GIAWGIAWGIARR96 pKa = 11.84GIARR100 pKa = 11.84GIARR104 pKa = 11.84GIARR108 pKa = 11.84GIARR112 pKa = 11.84GIARR116 pKa = 11.84GIARR120 pKa = 11.84GIARR124 pKa = 11.84GIARR128 pKa = 11.84GIARR132 pKa = 11.84GIARR136 pKa = 11.84GIAWGIARR144 pKa = 11.84GIARR148 pKa = 11.84GIGGG152 pKa = 3.66

Molecular weight: 15.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

21887

0

21887

9312152

35

8678

425.5

47.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.222 ± 0.019

1.929 ± 0.012

5.515 ± 0.017

6.811 ± 0.025

3.742 ± 0.013

5.892 ± 0.026

2.397 ± 0.008

5.152 ± 0.014

6.514 ± 0.025

8.896 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.352 ± 0.008

4.447 ± 0.014

5.811 ± 0.027

3.956 ± 0.014

5.565 ± 0.016

8.404 ± 0.025

5.796 ± 0.019

6.482 ± 0.017

1.169 ± 0.006

2.947 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski