Parasulfuritortus cantonensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Thiobacillaceae; Parasulfuritortus

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2975 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V2NW73|A0A4V2NW73_9PROT Histidine kinase OS=Parasulfuritortus cantonensis OX=2528202 GN=EZJ19_05430 PE=4 SV=1
MM1 pKa = 7.2GTGLLNISLSGLNAAMAGIRR21 pKa = 11.84TVQQNIANANTAGYY35 pKa = 7.37TRR37 pKa = 11.84QEE39 pKa = 4.44VVQSASTPQYY49 pKa = 10.89SGGGYY54 pKa = 10.14LGTGVQVDD62 pKa = 4.18TVRR65 pKa = 11.84RR66 pKa = 11.84IYY68 pKa = 10.83DD69 pKa = 3.23QFLTSQTQNYY79 pKa = 6.08QTQLSAAEE87 pKa = 4.76AYY89 pKa = 10.12SSYY92 pKa = 11.05ASEE95 pKa = 3.93VDD97 pKa = 3.27ALLGGSSTGLSTPLQTFFSAVSEE120 pKa = 4.39VANDD124 pKa = 3.78PTSLTARR131 pKa = 11.84QQMISTANSLASRR144 pKa = 11.84FNLLADD150 pKa = 3.62NLQSIKK156 pKa = 10.17TEE158 pKa = 3.89INSEE162 pKa = 4.0VSTIATQINSYY173 pKa = 10.9ADD175 pKa = 3.43QIQSLNAEE183 pKa = 4.14IARR186 pKa = 11.84AQGSGQTPNDD196 pKa = 3.89LLDD199 pKa = 4.03QRR201 pKa = 11.84DD202 pKa = 3.66QLVNEE207 pKa = 4.61LGKK210 pKa = 10.54LVNVSSIQQSDD221 pKa = 3.6GTVAVMIGNGQPLVVGTAVRR241 pKa = 11.84HH242 pKa = 4.46VVAVSDD248 pKa = 4.31SADD251 pKa = 3.4PTQTILAMEE260 pKa = 4.93IPNSTATEE268 pKa = 4.25VIDD271 pKa = 4.25PSSITSGSLGGLFAFRR287 pKa = 11.84DD288 pKa = 3.84EE289 pKa = 4.34VLNPSIADD297 pKa = 4.02LDD299 pKa = 3.78QLAQSLADD307 pKa = 3.69AFNSQHH313 pKa = 5.77EE314 pKa = 4.26AGYY317 pKa = 10.46DD318 pKa = 3.48LNGAAGTAFFSYY330 pKa = 10.41SATSPAGTLAVVISQASQVAAASQGVSAAADD361 pKa = 3.52AGNSGDD367 pKa = 3.65ASIGAVTLSEE377 pKa = 4.37TVTRR381 pKa = 11.84PLADD385 pKa = 3.19APYY388 pKa = 8.54TLSYY392 pKa = 10.74NAGTVTVTDD401 pKa = 4.1ASANVVGSFTYY412 pKa = 10.32TSGATMTFDD421 pKa = 4.97GISVAITDD429 pKa = 4.07GSGGIADD436 pKa = 4.57GDD438 pKa = 4.0TFTIDD443 pKa = 3.05NSGAYY448 pKa = 9.57SGPGDD453 pKa = 3.77NGNALLLAGLQNEE466 pKa = 4.29AVIGSSTLSEE476 pKa = 4.46YY477 pKa = 9.63NTALVGRR484 pKa = 11.84NATYY488 pKa = 11.12ANSADD493 pKa = 3.75TNVSNFTSLYY503 pKa = 7.31QQSYY507 pKa = 11.39DD508 pKa = 3.44SLQSVSGVNLDD519 pKa = 3.63EE520 pKa = 4.59EE521 pKa = 4.55AVKK524 pKa = 10.7LIQLQQAYY532 pKa = 8.59QAAAKK537 pKa = 9.6AIQVSSTLFDD547 pKa = 3.61AVLGAMQQ554 pKa = 4.42

Molecular weight: 56.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R1B8X1|A0A4R1B8X1_9PROT tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Parasulfuritortus cantonensis OX=2528202 GN=miaB PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.36RR3 pKa = 11.84TYY5 pKa = 9.97QPSVVRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.57RR14 pKa = 11.84THH16 pKa = 5.82GFRR19 pKa = 11.84ARR21 pKa = 11.84MKK23 pKa = 8.8TKK25 pKa = 10.36GGRR28 pKa = 11.84AVINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.58GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2975

0

2975

945077

26

2409

317.7

34.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.877 ± 0.079

0.979 ± 0.019

5.814 ± 0.042

5.712 ± 0.044

3.417 ± 0.027

8.463 ± 0.043

2.308 ± 0.023

4.268 ± 0.035

3.233 ± 0.042

11.139 ± 0.062

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.397 ± 0.021

2.603 ± 0.029

5.143 ± 0.034

3.333 ± 0.026

7.364 ± 0.051

4.719 ± 0.034

4.677 ± 0.052

7.538 ± 0.038

1.419 ± 0.02

2.595 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski