Amino acid dipepetide frequency for Helicobasidium mompa endornavirus 1-670 (HmEV)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.957AlaAla: 5.957 ± 0.0
0.372AlaCys: 0.372 ± 0.0
2.978AlaAsp: 2.978 ± 0.0
4.281AlaGlu: 4.281 ± 0.0
1.675AlaPhe: 1.675 ± 0.0
4.095AlaGly: 4.095 ± 0.0
2.234AlaHis: 2.234 ± 0.0
5.026AlaIle: 5.026 ± 0.0
4.281AlaLys: 4.281 ± 0.0
6.329AlaLeu: 6.329 ± 0.0
2.606AlaMet: 2.606 ± 0.0
3.723AlaAsn: 3.723 ± 0.0
3.723AlaPro: 3.723 ± 0.0
1.303AlaGln: 1.303 ± 0.0
2.978AlaArg: 2.978 ± 0.0
4.654AlaSer: 4.654 ± 0.0
6.329AlaThr: 6.329 ± 0.0
4.468AlaVal: 4.468 ± 0.0
1.675AlaTrp: 1.675 ± 0.0
1.675AlaTyr: 1.675 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.489CysAla: 1.489 ± 0.0
0.558CysCys: 0.558 ± 0.0
0.558CysAsp: 0.558 ± 0.0
0.745CysGlu: 0.745 ± 0.0
0.186CysPhe: 0.186 ± 0.0
1.862CysGly: 1.862 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.372CysIle: 0.372 ± 0.0
1.117CysLys: 1.117 ± 0.0
0.931CysLeu: 0.931 ± 0.0
1.117CysMet: 1.117 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.745CysPro: 0.745 ± 0.0
0.186CysGln: 0.186 ± 0.0
0.558CysArg: 0.558 ± 0.0
0.372CysSer: 0.372 ± 0.0
1.489CysThr: 1.489 ± 0.0
1.117CysVal: 1.117 ± 0.0
0.186CysTrp: 0.186 ± 0.0
0.372CysTyr: 0.372 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.095AspAla: 4.095 ± 0.0
1.489AspCys: 1.489 ± 0.0
4.468AspAsp: 4.468 ± 0.0
2.048AspGlu: 2.048 ± 0.0
2.234AspPhe: 2.234 ± 0.0
3.537AspGly: 3.537 ± 0.0
2.048AspHis: 2.048 ± 0.0
2.234AspIle: 2.234 ± 0.0
4.095AspLys: 4.095 ± 0.0
5.212AspLeu: 5.212 ± 0.0
2.42AspMet: 2.42 ± 0.0
2.792AspAsn: 2.792 ± 0.0
2.42AspPro: 2.42 ± 0.0
2.048AspGln: 2.048 ± 0.0
2.606AspArg: 2.606 ± 0.0
2.978AspSer: 2.978 ± 0.0
4.654AspThr: 4.654 ± 0.0
4.654AspVal: 4.654 ± 0.0
2.234AspTrp: 2.234 ± 0.0
0.931AspTyr: 0.931 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.026GluAla: 5.026 ± 0.0
0.931GluCys: 0.931 ± 0.0
2.048GluAsp: 2.048 ± 0.0
2.606GluGlu: 2.606 ± 0.0
2.048GluPhe: 2.048 ± 0.0
2.234GluGly: 2.234 ± 0.0
2.42GluHis: 2.42 ± 0.0
2.792GluIle: 2.792 ± 0.0
2.048GluLys: 2.048 ± 0.0
5.771GluLeu: 5.771 ± 0.0
1.303GluMet: 1.303 ± 0.0
1.862GluAsn: 1.862 ± 0.0
2.048GluPro: 2.048 ± 0.0
2.606GluGln: 2.606 ± 0.0
2.606GluArg: 2.606 ± 0.0
2.792GluSer: 2.792 ± 0.0
3.351GluThr: 3.351 ± 0.0
3.723GluVal: 3.723 ± 0.0
1.862GluTrp: 1.862 ± 0.0
1.489GluTyr: 1.489 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.862PheAla: 1.862 ± 0.0
0.558PheCys: 0.558 ± 0.0
2.606PheAsp: 2.606 ± 0.0
1.862PheGlu: 1.862 ± 0.0
1.117PhePhe: 1.117 ± 0.0
1.489PheGly: 1.489 ± 0.0
0.558PheHis: 0.558 ± 0.0
1.117PheIle: 1.117 ± 0.0
1.303PheLys: 1.303 ± 0.0
2.792PheLeu: 2.792 ± 0.0
0.558PheMet: 0.558 ± 0.0
2.792PheAsn: 2.792 ± 0.0
0.186PhePro: 0.186 ± 0.0
0.558PheGln: 0.558 ± 0.0
1.303PheArg: 1.303 ± 0.0
1.489PheSer: 1.489 ± 0.0
2.606PheThr: 2.606 ± 0.0
2.048PheVal: 2.048 ± 0.0
0.186PheTrp: 0.186 ± 0.0
0.745PheTyr: 0.745 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.723GlyAla: 3.723 ± 0.0
0.186GlyCys: 0.186 ± 0.0
3.909GlyAsp: 3.909 ± 0.0
2.234GlyGlu: 2.234 ± 0.0
0.931GlyPhe: 0.931 ± 0.0
2.792GlyGly: 2.792 ± 0.0
2.792GlyHis: 2.792 ± 0.0
3.165GlyIle: 3.165 ± 0.0
3.723GlyLys: 3.723 ± 0.0
5.957GlyLeu: 5.957 ± 0.0
2.606GlyMet: 2.606 ± 0.0
3.909GlyAsn: 3.909 ± 0.0
2.606GlyPro: 2.606 ± 0.0
1.117GlyGln: 1.117 ± 0.0
4.281GlyArg: 4.281 ± 0.0
4.654GlySer: 4.654 ± 0.0
5.398GlyThr: 5.398 ± 0.0
4.281GlyVal: 4.281 ± 0.0
1.489GlyTrp: 1.489 ± 0.0
2.048GlyTyr: 2.048 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
3.165HisAla: 3.165 ± 0.0
0.372HisCys: 0.372 ± 0.0
3.537HisAsp: 3.537 ± 0.0
0.931HisGlu: 0.931 ± 0.0
1.675HisPhe: 1.675 ± 0.0
1.489HisGly: 1.489 ± 0.0
1.862HisHis: 1.862 ± 0.0
1.862HisIle: 1.862 ± 0.0
2.234HisLys: 2.234 ± 0.0
2.606HisLeu: 2.606 ± 0.0
0.931HisMet: 0.931 ± 0.0
2.978HisAsn: 2.978 ± 0.0
1.303HisPro: 1.303 ± 0.0
1.862HisGln: 1.862 ± 0.0
0.931HisArg: 0.931 ± 0.0
1.862HisSer: 1.862 ± 0.0
1.862HisThr: 1.862 ± 0.0
2.234HisVal: 2.234 ± 0.0
0.931HisTrp: 0.931 ± 0.0
0.558HisTyr: 0.558 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.468IleAla: 4.468 ± 0.0
0.745IleCys: 0.745 ± 0.0
1.675IleAsp: 1.675 ± 0.0
3.723IleGlu: 3.723 ± 0.0
1.303IlePhe: 1.303 ± 0.0
4.468IleGly: 4.468 ± 0.0
1.675IleHis: 1.675 ± 0.0
3.909IleIle: 3.909 ± 0.0
4.095IleLys: 4.095 ± 0.0
4.84IleLeu: 4.84 ± 0.0
1.489IleMet: 1.489 ± 0.0
2.606IleAsn: 2.606 ± 0.0
2.606IlePro: 2.606 ± 0.0
1.489IleGln: 1.489 ± 0.0
2.606IleArg: 2.606 ± 0.0
2.792IleSer: 2.792 ± 0.0
4.281IleThr: 4.281 ± 0.0
3.723IleVal: 3.723 ± 0.0
0.558IleTrp: 0.558 ± 0.0
1.675IleTyr: 1.675 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.351LysAla: 3.351 ± 0.0
0.745LysCys: 0.745 ± 0.0
2.606LysAsp: 2.606 ± 0.0
5.026LysGlu: 5.026 ± 0.0
1.675LysPhe: 1.675 ± 0.0
3.165LysGly: 3.165 ± 0.0
1.117LysHis: 1.117 ± 0.0
3.723LysIle: 3.723 ± 0.0
3.165LysLys: 3.165 ± 0.0
5.585LysLeu: 5.585 ± 0.0
2.792LysMet: 2.792 ± 0.0
2.42LysAsn: 2.42 ± 0.0
3.351LysPro: 3.351 ± 0.0
2.048LysGln: 2.048 ± 0.0
3.165LysArg: 3.165 ± 0.0
2.234LysSer: 2.234 ± 0.0
4.468LysThr: 4.468 ± 0.0
4.095LysVal: 4.095 ± 0.0
0.931LysTrp: 0.931 ± 0.0
1.489LysTyr: 1.489 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.26LeuAla: 7.26 ± 0.0
0.372LeuCys: 0.372 ± 0.0
5.585LeuAsp: 5.585 ± 0.0
5.398LeuGlu: 5.398 ± 0.0
1.117LeuPhe: 1.117 ± 0.0
4.654LeuGly: 4.654 ± 0.0
4.281LeuHis: 4.281 ± 0.0
3.909LeuIle: 3.909 ± 0.0
3.909LeuLys: 3.909 ± 0.0
8.563LeuLeu: 8.563 ± 0.0
2.792LeuMet: 2.792 ± 0.0
5.398LeuAsn: 5.398 ± 0.0
4.095LeuPro: 4.095 ± 0.0
4.095LeuGln: 4.095 ± 0.0
5.212LeuArg: 5.212 ± 0.0
5.212LeuSer: 5.212 ± 0.0
6.143LeuThr: 6.143 ± 0.0
6.888LeuVal: 6.888 ± 0.0
1.303LeuTrp: 1.303 ± 0.0
3.165LeuTyr: 3.165 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.117MetAla: 1.117 ± 0.0
0.558MetCys: 0.558 ± 0.0
3.165MetAsp: 3.165 ± 0.0
1.489MetGlu: 1.489 ± 0.0
1.117MetPhe: 1.117 ± 0.0
2.048MetGly: 2.048 ± 0.0
1.117MetHis: 1.117 ± 0.0
1.862MetIle: 1.862 ± 0.0
1.862MetLys: 1.862 ± 0.0
3.165MetLeu: 3.165 ± 0.0
0.931MetMet: 0.931 ± 0.0
1.117MetAsn: 1.117 ± 0.0
2.606MetPro: 2.606 ± 0.0
1.117MetGln: 1.117 ± 0.0
1.862MetArg: 1.862 ± 0.0
2.048MetSer: 2.048 ± 0.0
1.862MetThr: 1.862 ± 0.0
1.675MetVal: 1.675 ± 0.0
0.931MetTrp: 0.931 ± 0.0
1.675MetTyr: 1.675 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.978AsnAla: 2.978 ± 0.0
0.745AsnCys: 0.745 ± 0.0
2.606AsnAsp: 2.606 ± 0.0
2.978AsnGlu: 2.978 ± 0.0
1.303AsnPhe: 1.303 ± 0.0
4.281AsnGly: 4.281 ± 0.0
1.303AsnHis: 1.303 ± 0.0
3.351AsnIle: 3.351 ± 0.0
4.654AsnLys: 4.654 ± 0.0
5.398AsnLeu: 5.398 ± 0.0
2.234AsnMet: 2.234 ± 0.0
3.537AsnAsn: 3.537 ± 0.0
2.234AsnPro: 2.234 ± 0.0
1.862AsnGln: 1.862 ± 0.0
3.723AsnArg: 3.723 ± 0.0
3.165AsnSer: 3.165 ± 0.0
4.468AsnThr: 4.468 ± 0.0
4.468AsnVal: 4.468 ± 0.0
0.558AsnTrp: 0.558 ± 0.0
1.675AsnTyr: 1.675 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.675ProAla: 1.675 ± 0.0
0.931ProCys: 0.931 ± 0.0
2.42ProAsp: 2.42 ± 0.0
2.048ProGlu: 2.048 ± 0.0
1.117ProPhe: 1.117 ± 0.0
3.909ProGly: 3.909 ± 0.0
1.675ProHis: 1.675 ± 0.0
2.42ProIle: 2.42 ± 0.0
2.234ProLys: 2.234 ± 0.0
3.723ProLeu: 3.723 ± 0.0
0.931ProMet: 0.931 ± 0.0
3.165ProAsn: 3.165 ± 0.0
2.048ProPro: 2.048 ± 0.0
1.675ProGln: 1.675 ± 0.0
1.489ProArg: 1.489 ± 0.0
1.862ProSer: 1.862 ± 0.0
5.212ProThr: 5.212 ± 0.0
3.723ProVal: 3.723 ± 0.0
0.931ProTrp: 0.931 ± 0.0
1.489ProTyr: 1.489 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.792GlnAla: 2.792 ± 0.0
0.931GlnCys: 0.931 ± 0.0
1.117GlnAsp: 1.117 ± 0.0
0.931GlnGlu: 0.931 ± 0.0
0.745GlnPhe: 0.745 ± 0.0
1.675GlnGly: 1.675 ± 0.0
2.048GlnHis: 2.048 ± 0.0
1.862GlnIle: 1.862 ± 0.0
1.675GlnLys: 1.675 ± 0.0
2.792GlnLeu: 2.792 ± 0.0
1.117GlnMet: 1.117 ± 0.0
1.303GlnAsn: 1.303 ± 0.0
2.792GlnPro: 2.792 ± 0.0
0.745GlnGln: 0.745 ± 0.0
1.862GlnArg: 1.862 ± 0.0
1.862GlnSer: 1.862 ± 0.0
3.165GlnThr: 3.165 ± 0.0
2.234GlnVal: 2.234 ± 0.0
0.558GlnTrp: 0.558 ± 0.0
1.117GlnTyr: 1.117 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.165ArgAla: 3.165 ± 0.0
0.745ArgCys: 0.745 ± 0.0
3.351ArgAsp: 3.351 ± 0.0
2.792ArgGlu: 2.792 ± 0.0
1.862ArgPhe: 1.862 ± 0.0
3.909ArgGly: 3.909 ± 0.0
1.489ArgHis: 1.489 ± 0.0
2.606ArgIle: 2.606 ± 0.0
2.792ArgLys: 2.792 ± 0.0
3.723ArgLeu: 3.723 ± 0.0
2.048ArgMet: 2.048 ± 0.0
2.234ArgAsn: 2.234 ± 0.0
2.42ArgPro: 2.42 ± 0.0
2.048ArgGln: 2.048 ± 0.0
1.489ArgArg: 1.489 ± 0.0
2.978ArgSer: 2.978 ± 0.0
3.165ArgThr: 3.165 ± 0.0
4.84ArgVal: 4.84 ± 0.0
0.931ArgTrp: 0.931 ± 0.0
2.048ArgTyr: 2.048 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.095SerAla: 4.095 ± 0.0
0.745SerCys: 0.745 ± 0.0
4.281SerAsp: 4.281 ± 0.0
2.048SerGlu: 2.048 ± 0.0
1.862SerPhe: 1.862 ± 0.0
3.723SerGly: 3.723 ± 0.0
2.048SerHis: 2.048 ± 0.0
3.351SerIle: 3.351 ± 0.0
3.165SerLys: 3.165 ± 0.0
5.957SerLeu: 5.957 ± 0.0
1.117SerMet: 1.117 ± 0.0
3.165SerAsn: 3.165 ± 0.0
2.048SerPro: 2.048 ± 0.0
0.558SerGln: 0.558 ± 0.0
3.537SerArg: 3.537 ± 0.0
3.537SerSer: 3.537 ± 0.0
4.468SerThr: 4.468 ± 0.0
3.351SerVal: 3.351 ± 0.0
0.931SerTrp: 0.931 ± 0.0
1.303SerTyr: 1.303 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.957ThrAla: 5.957 ± 0.0
1.303ThrCys: 1.303 ± 0.0
4.84ThrAsp: 4.84 ± 0.0
3.537ThrGlu: 3.537 ± 0.0
2.606ThrPhe: 2.606 ± 0.0
4.654ThrGly: 4.654 ± 0.0
2.792ThrHis: 2.792 ± 0.0
5.585ThrIle: 5.585 ± 0.0
5.398ThrLys: 5.398 ± 0.0
5.398ThrLeu: 5.398 ± 0.0
2.792ThrMet: 2.792 ± 0.0
4.654ThrAsn: 4.654 ± 0.0
2.42ThrPro: 2.42 ± 0.0
1.675ThrGln: 1.675 ± 0.0
3.909ThrArg: 3.909 ± 0.0
3.909ThrSer: 3.909 ± 0.0
7.818ThrThr: 7.818 ± 0.0
6.515ThrVal: 6.515 ± 0.0
1.117ThrTrp: 1.117 ± 0.0
2.234ThrTyr: 2.234 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.654ValAla: 4.654 ± 0.0
0.931ValCys: 0.931 ± 0.0
4.095ValAsp: 4.095 ± 0.0
3.351ValGlu: 3.351 ± 0.0
1.489ValPhe: 1.489 ± 0.0
5.585ValGly: 5.585 ± 0.0
1.862ValHis: 1.862 ± 0.0
3.351ValIle: 3.351 ± 0.0
2.792ValLys: 2.792 ± 0.0
6.701ValLeu: 6.701 ± 0.0
1.675ValMet: 1.675 ± 0.0
6.701ValAsn: 6.701 ± 0.0
3.537ValPro: 3.537 ± 0.0
3.351ValGln: 3.351 ± 0.0
4.281ValArg: 4.281 ± 0.0
5.212ValSer: 5.212 ± 0.0
5.771ValThr: 5.771 ± 0.0
6.329ValVal: 6.329 ± 0.0
1.117ValTrp: 1.117 ± 0.0
2.792ValTyr: 2.792 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.489TrpAla: 1.489 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.931TrpAsp: 0.931 ± 0.0
1.303TrpGlu: 1.303 ± 0.0
1.117TrpPhe: 1.117 ± 0.0
0.931TrpGly: 0.931 ± 0.0
0.745TrpHis: 0.745 ± 0.0
0.745TrpIle: 0.745 ± 0.0
0.558TrpLys: 0.558 ± 0.0
1.675TrpLeu: 1.675 ± 0.0
0.558TrpMet: 0.558 ± 0.0
0.558TrpAsn: 0.558 ± 0.0
0.745TrpPro: 0.745 ± 0.0
1.489TrpGln: 1.489 ± 0.0
0.745TrpArg: 0.745 ± 0.0
0.931TrpSer: 0.931 ± 0.0
1.117TrpThr: 1.117 ± 0.0
2.42TrpVal: 2.42 ± 0.0
0.186TrpTrp: 0.186 ± 0.0
0.745TrpTyr: 0.745 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.048TyrAla: 2.048 ± 0.0
0.745TyrCys: 0.745 ± 0.0
2.42TyrAsp: 2.42 ± 0.0
2.234TyrGlu: 2.234 ± 0.0
0.558TyrPhe: 0.558 ± 0.0
1.303TyrGly: 1.303 ± 0.0
1.117TyrHis: 1.117 ± 0.0
1.489TyrIle: 1.489 ± 0.0
2.048TyrLys: 2.048 ± 0.0
2.234TyrLeu: 2.234 ± 0.0
1.117TyrMet: 1.117 ± 0.0
2.606TyrAsn: 2.606 ± 0.0
0.745TyrPro: 0.745 ± 0.0
1.489TyrGln: 1.489 ± 0.0
1.489TyrArg: 1.489 ± 0.0
0.745TyrSer: 0.745 ± 0.0
1.489TyrThr: 1.489 ± 0.0
2.978TyrVal: 2.978 ± 0.0
0.372TyrTrp: 0.372 ± 0.0
1.303TyrTyr: 1.303 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (5373 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski