Taibaiella sp. KBW10

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Taibaiella; unclassified Taibaiella

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3074 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N7AAX8|A0A3N7AAX8_9BACT S9 family peptidase OS=Taibaiella sp. KBW10 OX=2153357 GN=DBR32_03435 PE=4 SV=1
MM1 pKa = 7.9EE2 pKa = 6.33DD3 pKa = 3.24NMIHH7 pKa = 5.22VHH9 pKa = 5.78VEE11 pKa = 3.85NADD14 pKa = 3.73GSVDD18 pKa = 3.55TMEE21 pKa = 5.4CPTDD25 pKa = 3.33MGLSLMEE32 pKa = 3.88MLKK35 pKa = 10.61ASEE38 pKa = 4.39YY39 pKa = 10.21PVLATCGGMALCATCCVDD57 pKa = 4.3VLEE60 pKa = 5.22GLDD63 pKa = 3.58KK64 pKa = 11.22LGEE67 pKa = 4.19ISDD70 pKa = 4.95DD71 pKa = 3.81EE72 pKa = 4.55YY73 pKa = 12.04AMLDD77 pKa = 3.8TLPDD81 pKa = 4.06LLPNSRR87 pKa = 11.84LACQLRR93 pKa = 11.84LNPDD97 pKa = 2.8MHH99 pKa = 6.12GLKK102 pKa = 10.38FKK104 pKa = 10.56IHH106 pKa = 7.19DD107 pKa = 4.07PQEE110 pKa = 4.09GG111 pKa = 3.28

Molecular weight: 12.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N7CD51|A0A3N7CD51_9BACT Uncharacterized protein OS=Taibaiella sp. KBW10 OX=2153357 GN=DBR32_14535 PE=4 SV=1
MM1 pKa = 7.65KK2 pKa = 10.09KK3 pKa = 9.78HH4 pKa = 5.87KK5 pKa = 9.21HH6 pKa = 4.56TLLLRR11 pKa = 11.84LALVVILLMHH21 pKa = 6.97SIPGIFNNGINDD33 pKa = 4.18FGNLYY38 pKa = 10.32LNHH41 pKa = 7.17AGFAPLGVPLAWAIKK56 pKa = 9.72LSHH59 pKa = 5.87VVCALCFLCNRR70 pKa = 11.84YY71 pKa = 8.13ITIAGIATIFILITGIFMIHH91 pKa = 6.52LKK93 pKa = 10.28EE94 pKa = 3.55GWYY97 pKa = 10.19VVGGGRR103 pKa = 11.84NGIEE107 pKa = 4.12FNLLLIVVTLSVMFPNGWTKK127 pKa = 10.82NSGIRR132 pKa = 11.84RR133 pKa = 11.84RR134 pKa = 11.84RR135 pKa = 3.28

Molecular weight: 15.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3074

0

3074

1064520

25

3339

346.3

38.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.988 ± 0.047

0.94 ± 0.018

4.996 ± 0.033

5.364 ± 0.052

4.653 ± 0.034

6.831 ± 0.043

1.915 ± 0.022

7.283 ± 0.037

6.666 ± 0.051

9.248 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.449 ± 0.021

5.697 ± 0.046

3.851 ± 0.026

4.136 ± 0.03

3.594 ± 0.032

6.276 ± 0.036

6.416 ± 0.073

6.252 ± 0.036

1.125 ± 0.016

4.32 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski