Amino acid dipepetide frequency for Sogatella furcifera totivirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
11.956AlaAla: 11.956 ± 1.679
0.0AlaCys: 0.0 ± 0.0
5.978AlaAsp: 5.978 ± 0.131
5.314AlaGlu: 5.314 ± 0.484
3.653AlaPhe: 3.653 ± 0.051
11.292AlaGly: 11.292 ± 1.087
0.664AlaHis: 0.664 ± 0.12
4.982AlaIle: 4.982 ± 0.66
4.982AlaLys: 4.982 ± 0.66
6.31AlaLeu: 6.31 ± 0.99
1.328AlaMet: 1.328 ± 0.239
1.661AlaAsn: 1.661 ± 0.063
2.989AlaPro: 2.989 ± 0.302
1.328AlaGln: 1.328 ± 0.239
1.993AlaArg: 1.993 ± 0.359
6.974AlaSer: 6.974 ± 0.074
3.985AlaThr: 3.985 ± 0.245
1.993AlaVal: 1.993 ± 0.114
1.993AlaTrp: 1.993 ± 0.114
1.661AlaTyr: 1.661 ± 0.063
0.0AlaXaa: 0.0 ± 0.0
Cys
0.332CysAla: 0.332 ± 0.176
0.664CysCys: 0.664 ± 0.12
0.0CysAsp: 0.0 ± 0.0
0.996CysGlu: 0.996 ± 0.057
0.0CysPhe: 0.0 ± 0.0
0.664CysGly: 0.664 ± 0.12
0.664CysHis: 0.664 ± 0.12
0.332CysIle: 0.332 ± 0.176
0.664CysLys: 0.664 ± 0.12
0.664CysLeu: 0.664 ± 0.353
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.664CysPro: 0.664 ± 0.12
1.328CysGln: 1.328 ± 0.239
0.664CysArg: 0.664 ± 0.12
0.664CysSer: 0.664 ± 0.12
1.993CysThr: 1.993 ± 0.114
0.996CysVal: 0.996 ± 0.057
0.0CysTrp: 0.0 ± 0.0
0.664CysTyr: 0.664 ± 0.353
0.0CysXaa: 0.0 ± 0.0
Asp
8.967AspAla: 8.967 ± 0.905
0.996AspCys: 0.996 ± 0.057
1.661AspAsp: 1.661 ± 0.41
0.332AspGlu: 0.332 ± 0.176
1.328AspPhe: 1.328 ± 0.233
3.653AspGly: 3.653 ± 0.523
1.993AspHis: 1.993 ± 0.114
2.657AspIle: 2.657 ± 0.478
2.657AspLys: 2.657 ± 0.466
3.985AspLeu: 3.985 ± 0.227
0.664AspMet: 0.664 ± 0.12
2.657AspAsn: 2.657 ± 0.478
1.993AspPro: 1.993 ± 0.359
1.328AspGln: 1.328 ± 0.239
3.653AspArg: 3.653 ± 0.421
5.646AspSer: 5.646 ± 0.308
6.642AspThr: 6.642 ± 0.723
3.653AspVal: 3.653 ± 0.523
1.328AspTrp: 1.328 ± 0.239
1.328AspTyr: 1.328 ± 0.239
0.0AspXaa: 0.0 ± 0.0
Glu
3.321GluAla: 3.321 ± 0.125
0.332GluCys: 0.332 ± 0.176
2.657GluAsp: 2.657 ± 0.006
3.321GluGlu: 3.321 ± 0.598
1.993GluPhe: 1.993 ± 0.586
3.321GluGly: 3.321 ± 0.347
1.661GluHis: 1.661 ± 0.41
2.657GluIle: 2.657 ± 0.478
2.657GluLys: 2.657 ± 0.478
4.318GluLeu: 4.318 ± 0.404
0.664GluMet: 0.664 ± 0.353
2.989GluAsn: 2.989 ± 0.302
0.0GluPro: 0.0 ± 0.0
1.993GluGln: 1.993 ± 0.586
3.321GluArg: 3.321 ± 0.819
3.321GluSer: 3.321 ± 0.125
2.325GluThr: 2.325 ± 0.29
3.321GluVal: 3.321 ± 0.125
0.332GluTrp: 0.332 ± 0.176
3.985GluTyr: 3.985 ± 0.717
0.0GluXaa: 0.0 ± 0.0
Phe
0.664PheAla: 0.664 ± 0.12
0.0PheCys: 0.0 ± 0.0
3.985PheAsp: 3.985 ± 0.245
0.996PheGlu: 0.996 ± 0.529
2.657PhePhe: 2.657 ± 0.466
1.993PheGly: 1.993 ± 1.058
0.664PheHis: 0.664 ± 0.12
0.996PheIle: 0.996 ± 0.057
2.325PheLys: 2.325 ± 0.182
4.318PheLeu: 4.318 ± 0.541
1.993PheMet: 1.993 ± 0.114
1.328PheAsn: 1.328 ± 0.239
0.0PhePro: 0.0 ± 0.0
0.664PheGln: 0.664 ± 0.12
1.328PheArg: 1.328 ± 0.233
4.65PheSer: 4.65 ± 0.58
2.325PheThr: 2.325 ± 0.182
1.661PheVal: 1.661 ± 0.41
0.332PheTrp: 0.332 ± 0.176
1.993PheTyr: 1.993 ± 0.359
0.0PheXaa: 0.0 ± 0.0
Gly
5.978GlyAla: 5.978 ± 0.131
0.996GlyCys: 0.996 ± 0.057
3.321GlyAsp: 3.321 ± 0.819
3.321GlyGlu: 3.321 ± 1.291
4.318GlyPhe: 4.318 ± 0.068
4.318GlyGly: 4.318 ± 1.821
0.332GlyHis: 0.332 ± 0.176
1.661GlyIle: 1.661 ± 0.41
2.989GlyLys: 2.989 ± 0.302
6.642GlyLeu: 6.642 ± 0.251
0.664GlyMet: 0.664 ± 0.353
1.328GlyAsn: 1.328 ± 0.233
2.325GlyPro: 2.325 ± 0.29
2.325GlyGln: 2.325 ± 0.29
5.314GlyArg: 5.314 ± 0.933
8.967GlySer: 8.967 ± 0.039
3.985GlyThr: 3.985 ± 0.227
7.307GlyVal: 7.307 ± 0.37
2.657GlyTrp: 2.657 ± 0.006
4.318GlyTyr: 4.318 ± 0.068
0.0GlyXaa: 0.0 ± 0.0
His
0.332HisAla: 0.332 ± 0.176
0.664HisCys: 0.664 ± 0.12
1.661HisAsp: 1.661 ± 0.063
0.0HisGlu: 0.0 ± 0.0
1.993HisPhe: 1.993 ± 0.114
1.328HisGly: 1.328 ± 0.233
0.332HisHis: 0.332 ± 0.176
0.332HisIle: 0.332 ± 0.176
0.332HisLys: 0.332 ± 0.176
3.985HisLeu: 3.985 ± 0.227
0.0HisMet: 0.0 ± 0.0
0.0HisAsn: 0.0 ± 0.0
1.328HisPro: 1.328 ± 0.239
0.664HisGln: 0.664 ± 0.353
2.325HisArg: 2.325 ± 0.182
1.993HisSer: 1.993 ± 0.114
1.661HisThr: 1.661 ± 0.063
2.325HisVal: 2.325 ± 0.29
0.664HisTrp: 0.664 ± 0.12
0.664HisTyr: 0.664 ± 0.12
0.0HisXaa: 0.0 ± 0.0
Ile
1.661IleAla: 1.661 ± 0.063
0.0IleCys: 0.0 ± 0.0
2.657IleAsp: 2.657 ± 0.478
2.989IleGlu: 2.989 ± 0.774
0.664IlePhe: 0.664 ± 0.12
3.321IleGly: 3.321 ± 0.347
0.0IleHis: 0.0 ± 0.0
0.332IleIle: 0.332 ± 0.176
1.661IleLys: 1.661 ± 0.063
2.657IleLeu: 2.657 ± 0.006
1.661IleMet: 1.661 ± 0.063
1.328IleAsn: 1.328 ± 0.239
3.985IlePro: 3.985 ± 0.245
2.325IleGln: 2.325 ± 0.182
1.661IleArg: 1.661 ± 0.41
6.31IleSer: 6.31 ± 0.045
2.325IleThr: 2.325 ± 0.182
4.65IleVal: 4.65 ± 0.108
0.0IleTrp: 0.0 ± 0.0
1.328IleTyr: 1.328 ± 0.706
0.0IleXaa: 0.0 ± 0.0
Lys
2.657LysAla: 2.657 ± 0.478
0.0LysCys: 0.0 ± 0.0
2.325LysAsp: 2.325 ± 0.182
5.646LysGlu: 5.646 ± 0.165
1.328LysPhe: 1.328 ± 0.239
1.328LysGly: 1.328 ± 0.233
1.661LysHis: 1.661 ± 0.063
1.328LysIle: 1.328 ± 0.233
0.664LysLys: 0.664 ± 0.353
3.653LysLeu: 3.653 ± 0.051
1.993LysMet: 1.993 ± 0.114
3.321LysAsn: 3.321 ± 0.347
1.328LysPro: 1.328 ± 0.239
0.664LysGln: 0.664 ± 0.12
2.657LysArg: 2.657 ± 0.478
4.982LysSer: 4.982 ± 0.284
1.993LysThr: 1.993 ± 0.114
3.321LysVal: 3.321 ± 0.125
1.993LysTrp: 1.993 ± 0.586
0.996LysTyr: 0.996 ± 0.057
0.0LysXaa: 0.0 ± 0.0
Leu
7.307LeuAla: 7.307 ± 0.102
0.996LeuCys: 0.996 ± 0.057
2.989LeuAsp: 2.989 ± 0.171
4.318LeuGlu: 4.318 ± 0.404
2.657LeuPhe: 2.657 ± 0.466
10.96LeuGly: 10.96 ± 0.625
1.328LeuHis: 1.328 ± 0.706
3.653LeuIle: 3.653 ± 0.051
3.321LeuLys: 3.321 ± 0.347
7.639LeuLeu: 7.639 ± 0.278
2.989LeuMet: 2.989 ± 0.302
4.318LeuAsn: 4.318 ± 0.068
3.653LeuPro: 3.653 ± 0.523
2.325LeuGln: 2.325 ± 0.654
5.646LeuArg: 5.646 ± 0.637
8.635LeuSer: 8.635 ± 0.808
6.974LeuThr: 6.974 ± 0.547
3.321LeuVal: 3.321 ± 0.347
0.664LeuTrp: 0.664 ± 0.12
4.318LeuTyr: 4.318 ± 1.348
0.0LeuXaa: 0.0 ± 0.0
Met
2.657MetAla: 2.657 ± 0.478
0.0MetCys: 0.0 ± 0.0
1.328MetAsp: 1.328 ± 0.239
0.332MetGlu: 0.332 ± 0.176
0.0MetPhe: 0.0 ± 0.0
1.661MetGly: 1.661 ± 0.063
1.328MetHis: 1.328 ± 0.233
1.661MetIle: 1.661 ± 0.063
1.661MetLys: 1.661 ± 0.063
2.325MetLeu: 2.325 ± 0.182
0.0MetMet: 0.0 ± 0.0
0.332MetAsn: 0.332 ± 0.176
3.321MetPro: 3.321 ± 0.598
0.332MetGln: 0.332 ± 0.296
0.332MetArg: 0.332 ± 0.176
1.993MetSer: 1.993 ± 0.114
1.328MetThr: 1.328 ± 0.239
2.325MetVal: 2.325 ± 0.182
0.664MetTrp: 0.664 ± 0.12
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.657AsnAla: 2.657 ± 0.478
0.0AsnCys: 0.0 ± 0.0
2.657AsnAsp: 2.657 ± 0.478
0.996AsnGlu: 0.996 ± 0.057
1.328AsnPhe: 1.328 ± 0.239
3.321AsnGly: 3.321 ± 0.125
0.996AsnHis: 0.996 ± 0.057
1.661AsnIle: 1.661 ± 0.41
1.328AsnLys: 1.328 ± 0.233
2.325AsnLeu: 2.325 ± 0.762
1.993AsnMet: 1.993 ± 0.245
2.325AsnAsn: 2.325 ± 0.182
0.996AsnPro: 0.996 ± 0.057
0.0AsnGln: 0.0 ± 0.0
1.993AsnArg: 1.993 ± 0.114
8.635AsnSer: 8.635 ± 1.081
2.989AsnThr: 2.989 ± 0.302
4.65AsnVal: 4.65 ± 0.364
1.661AsnTrp: 1.661 ± 0.063
1.328AsnTyr: 1.328 ± 0.239
0.0AsnXaa: 0.0 ± 0.0
Pro
4.982ProAla: 4.982 ± 0.66
0.0ProCys: 0.0 ± 0.0
1.328ProAsp: 1.328 ± 0.239
1.328ProGlu: 1.328 ± 0.233
1.661ProPhe: 1.661 ± 0.063
2.989ProGly: 2.989 ± 0.171
0.996ProHis: 0.996 ± 0.057
1.661ProIle: 1.661 ± 0.41
3.321ProLys: 3.321 ± 0.125
3.321ProLeu: 3.321 ± 0.125
0.0ProMet: 0.0 ± 0.0
1.993ProAsn: 1.993 ± 0.114
2.989ProPro: 2.989 ± 0.171
1.993ProGln: 1.993 ± 0.359
2.657ProArg: 2.657 ± 0.006
3.321ProSer: 3.321 ± 0.125
4.318ProThr: 4.318 ± 0.068
4.318ProVal: 4.318 ± 0.541
0.664ProTrp: 0.664 ± 0.12
1.328ProTyr: 1.328 ± 0.239
0.0ProXaa: 0.0 ± 0.0
Gln
1.328GlnAla: 1.328 ± 0.239
0.332GlnCys: 0.332 ± 0.176
1.993GlnAsp: 1.993 ± 0.359
1.993GlnGlu: 1.993 ± 0.359
0.996GlnPhe: 0.996 ± 0.057
1.661GlnGly: 1.661 ± 0.41
0.0GlnHis: 0.0 ± 0.0
0.332GlnIle: 0.332 ± 0.176
1.328GlnLys: 1.328 ± 0.239
4.318GlnLeu: 4.318 ± 0.404
2.657GlnMet: 2.657 ± 0.95
0.664GlnAsn: 0.664 ± 0.12
0.332GlnPro: 0.332 ± 0.296
0.0GlnGln: 0.0 ± 0.0
0.664GlnArg: 0.664 ± 0.12
1.661GlnSer: 1.661 ± 0.063
1.328GlnThr: 1.328 ± 0.239
2.989GlnVal: 2.989 ± 0.171
0.664GlnTrp: 0.664 ± 0.12
0.996GlnTyr: 0.996 ± 0.057
0.0GlnXaa: 0.0 ± 0.0
Arg
2.989ArgAla: 2.989 ± 0.302
0.0ArgCys: 0.0 ± 0.0
0.996ArgAsp: 0.996 ± 0.415
2.989ArgGlu: 2.989 ± 0.171
1.328ArgPhe: 1.328 ± 0.233
2.325ArgGly: 2.325 ± 0.29
1.661ArgHis: 1.661 ± 0.063
4.65ArgIle: 4.65 ± 0.108
2.325ArgLys: 2.325 ± 0.762
6.31ArgLeu: 6.31 ± 0.518
0.664ArgMet: 0.664 ± 0.12
2.325ArgAsn: 2.325 ± 0.29
3.653ArgPro: 3.653 ± 0.051
4.65ArgGln: 4.65 ± 0.108
4.65ArgArg: 4.65 ± 0.108
6.31ArgSer: 6.31 ± 0.427
1.993ArgThr: 1.993 ± 0.114
1.993ArgVal: 1.993 ± 0.586
0.664ArgTrp: 0.664 ± 0.353
0.332ArgTyr: 0.332 ± 0.176
0.0ArgXaa: 0.0 ± 0.0
Ser
8.635SerAla: 8.635 ± 0.609
1.661SerCys: 1.661 ± 0.063
9.299SerAsp: 9.299 ± 0.256
5.646SerGlu: 5.646 ± 0.78
5.314SerPhe: 5.314 ± 0.484
6.31SerGly: 6.31 ± 0.518
1.993SerHis: 1.993 ± 0.114
3.653SerIle: 3.653 ± 0.421
4.65SerLys: 4.65 ± 0.108
7.971SerLeu: 7.971 ± 0.455
1.661SerMet: 1.661 ± 0.063
4.982SerAsn: 4.982 ± 0.188
6.31SerPro: 6.31 ± 0.427
0.664SerGln: 0.664 ± 0.12
3.653SerArg: 3.653 ± 0.051
11.292SerSer: 11.292 ± 0.615
6.642SerThr: 6.642 ± 0.251
9.299SerVal: 9.299 ± 0.688
1.661SerTrp: 1.661 ± 0.41
5.646SerTyr: 5.646 ± 0.308
0.0SerXaa: 0.0 ± 0.0
Thr
3.985ThrAla: 3.985 ± 0.245
1.328ThrCys: 1.328 ± 0.239
4.982ThrAsp: 4.982 ± 0.188
2.657ThrGlu: 2.657 ± 0.006
1.661ThrPhe: 1.661 ± 0.41
2.657ThrGly: 2.657 ± 0.466
1.993ThrHis: 1.993 ± 0.359
3.653ThrIle: 3.653 ± 0.421
1.661ThrLys: 1.661 ± 0.41
6.642ThrLeu: 6.642 ± 0.723
1.993ThrMet: 1.993 ± 0.359
2.989ThrAsn: 2.989 ± 0.302
1.993ThrPro: 1.993 ± 0.114
0.0ThrGln: 0.0 ± 0.0
1.993ThrArg: 1.993 ± 0.114
9.631ThrSer: 9.631 ± 1.025
2.325ThrThr: 2.325 ± 0.182
4.318ThrVal: 4.318 ± 0.541
1.661ThrTrp: 1.661 ± 0.41
3.985ThrTyr: 3.985 ± 0.245
0.0ThrXaa: 0.0 ± 0.0
Val
4.65ValAla: 4.65 ± 0.58
2.325ValCys: 2.325 ± 0.182
5.978ValAsp: 5.978 ± 0.341
3.985ValGlu: 3.985 ± 0.227
0.664ValPhe: 0.664 ± 0.12
6.974ValGly: 6.974 ± 0.074
0.664ValHis: 0.664 ± 0.353
0.664ValIle: 0.664 ± 0.12
2.325ValLys: 2.325 ± 0.29
4.318ValLeu: 4.318 ± 1.348
0.996ValMet: 0.996 ± 0.057
7.307ValAsn: 7.307 ± 0.842
4.318ValPro: 4.318 ± 0.068
1.993ValGln: 1.993 ± 0.359
5.314ValArg: 5.314 ± 0.012
6.974ValSer: 6.974 ± 0.074
4.982ValThr: 4.982 ± 0.188
6.642ValVal: 6.642 ± 0.251
0.664ValTrp: 0.664 ± 0.12
3.321ValTyr: 3.321 ± 0.125
0.0ValXaa: 0.0 ± 0.0
Trp
2.325TrpAla: 2.325 ± 0.29
0.664TrpCys: 0.664 ± 0.12
0.664TrpAsp: 0.664 ± 0.12
0.332TrpGlu: 0.332 ± 0.176
0.0TrpPhe: 0.0 ± 0.0
1.328TrpGly: 1.328 ± 0.239
0.664TrpHis: 0.664 ± 0.12
1.661TrpIle: 1.661 ± 0.063
1.661TrpLys: 1.661 ± 0.063
2.989TrpLeu: 2.989 ± 0.643
0.0TrpMet: 0.0 ± 0.153
0.0TrpAsn: 0.0 ± 0.0
0.332TrpPro: 0.332 ± 0.176
0.664TrpGln: 0.664 ± 0.12
0.996TrpArg: 0.996 ± 0.057
1.328TrpSer: 1.328 ± 0.239
0.664TrpThr: 0.664 ± 0.12
2.989TrpVal: 2.989 ± 0.171
0.664TrpTrp: 0.664 ± 0.12
0.664TrpTyr: 0.664 ± 0.353
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.653TyrAla: 3.653 ± 0.051
0.996TyrCys: 0.996 ± 0.529
0.664TyrAsp: 0.664 ± 0.12
0.996TyrGlu: 0.996 ± 0.529
1.328TyrPhe: 1.328 ± 0.233
1.661TyrGly: 1.661 ± 0.41
2.989TyrHis: 2.989 ± 0.302
2.989TyrIle: 2.989 ± 0.302
1.328TyrLys: 1.328 ± 0.239
3.321TyrLeu: 3.321 ± 0.347
1.328TyrMet: 1.328 ± 0.239
1.993TyrAsn: 1.993 ± 0.359
2.657TyrPro: 2.657 ± 0.006
0.996TyrGln: 0.996 ± 0.057
1.993TyrArg: 1.993 ± 0.586
3.653TyrSer: 3.653 ± 0.051
1.328TyrThr: 1.328 ± 0.239
2.989TyrVal: 2.989 ± 0.302
1.993TyrTrp: 1.993 ± 0.359
2.325TyrTyr: 2.325 ± 0.182
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (3012 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski