Capybara microvirus Cap3_SP_472

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W8Q4|A0A4P8W8Q4_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_472 OX=2585466 PE=4 SV=1
MM1 pKa = 7.61NEE3 pKa = 3.58TLLYY7 pKa = 7.65RR8 pKa = 11.84TPYY11 pKa = 10.05DD12 pKa = 3.3GKK14 pKa = 9.11TSRR17 pKa = 11.84IPTDD21 pKa = 4.33PGSEE25 pKa = 3.67WANEE29 pKa = 3.91YY30 pKa = 10.38EE31 pKa = 4.07LQIVNKK37 pKa = 10.23KK38 pKa = 9.91KK39 pKa = 10.49DD40 pKa = 3.37LVYY43 pKa = 10.24TGRR46 pKa = 11.84HH47 pKa = 4.7NLYY50 pKa = 10.87EE51 pKa = 4.49EE52 pKa = 3.69IQKK55 pKa = 10.65YY56 pKa = 9.45KK57 pKa = 10.52EE58 pKa = 3.68EE59 pKa = 4.48CEE61 pKa = 3.75IEE63 pKa = 4.71NILKK67 pKa = 10.54RR68 pKa = 11.84MSTGDD73 pKa = 3.38YY74 pKa = 11.31SMLGEE79 pKa = 4.4EE80 pKa = 4.84GNYY83 pKa = 9.55IDD85 pKa = 5.14TEE87 pKa = 4.3GMPDD91 pKa = 3.72NLMDD95 pKa = 4.22AQNSILKK102 pKa = 9.29LQNEE106 pKa = 4.35WLKK109 pKa = 11.32LPVEE113 pKa = 4.05IRR115 pKa = 11.84KK116 pKa = 9.78KK117 pKa = 10.58FDD119 pKa = 3.16NSLEE123 pKa = 4.11AFVEE127 pKa = 4.54EE128 pKa = 4.64SGSEE132 pKa = 3.61EE133 pKa = 3.99WLNKK137 pKa = 10.12LGYY140 pKa = 6.72EE141 pKa = 4.27TKK143 pKa = 10.38KK144 pKa = 10.81EE145 pKa = 3.93EE146 pKa = 4.22TMKK149 pKa = 9.55QTSTEE154 pKa = 3.95TGEE157 pKa = 4.2TNEE160 pKa = 4.07

Molecular weight: 18.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W624|A0A4P8W624_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_472 OX=2585466 PE=4 SV=1
MM1 pKa = 7.41GCKK4 pKa = 9.4KK5 pKa = 10.31PKK7 pKa = 10.28IIVQDD12 pKa = 3.74LNKK15 pKa = 9.82WKK17 pKa = 8.97TAADD21 pKa = 3.29GHH23 pKa = 6.42KK24 pKa = 10.17YY25 pKa = 10.02HH26 pKa = 7.25PAEE29 pKa = 4.17CNYY32 pKa = 10.76ASEE35 pKa = 4.54EE36 pKa = 4.59DD37 pKa = 3.41INTYY41 pKa = 10.35KK42 pKa = 10.71DD43 pKa = 3.47EE44 pKa = 4.68KK45 pKa = 10.53IKK47 pKa = 10.75IIGTHH52 pKa = 6.33KK53 pKa = 10.7YY54 pKa = 10.62SLVPCGQCLGCRR66 pKa = 11.84LQRR69 pKa = 11.84SAEE72 pKa = 3.89WADD75 pKa = 3.57RR76 pKa = 11.84CTLEE80 pKa = 4.2MEE82 pKa = 4.79EE83 pKa = 5.17NPEE86 pKa = 4.03QCWFLTLTYY95 pKa = 10.6NDD97 pKa = 4.03EE98 pKa = 4.15NLPYY102 pKa = 9.66IDD104 pKa = 5.11EE105 pKa = 4.39FTTKK109 pKa = 10.44KK110 pKa = 10.73GITYY114 pKa = 9.62TDD116 pKa = 3.76TEE118 pKa = 4.66GTWNGCLQKK127 pKa = 10.68KK128 pKa = 10.03DD129 pKa = 3.24IQDD132 pKa = 3.2FLKK135 pKa = 10.32RR136 pKa = 11.84LRR138 pKa = 11.84RR139 pKa = 11.84RR140 pKa = 11.84WEE142 pKa = 3.96YY143 pKa = 10.84KK144 pKa = 10.29YY145 pKa = 10.27SAHH148 pKa = 7.27NIRR151 pKa = 11.84TFYY154 pKa = 10.45CGEE157 pKa = 4.06YY158 pKa = 10.48GPQTEE163 pKa = 4.19RR164 pKa = 11.84PHH166 pKa = 7.48YY167 pKa = 10.91HH168 pKa = 6.4MICFNLPITPDD179 pKa = 2.71MMTIQKK185 pKa = 10.16LNWEE189 pKa = 3.96KK190 pKa = 11.08DD191 pKa = 3.01ILYY194 pKa = 9.96KK195 pKa = 10.41CDD197 pKa = 4.07EE198 pKa = 4.66IEE200 pKa = 4.25QIWGKK205 pKa = 9.94GFVVIEE211 pKa = 4.06EE212 pKa = 4.97CNWQACNYY220 pKa = 6.53VARR223 pKa = 11.84YY224 pKa = 6.45ITKK227 pKa = 9.9KK228 pKa = 8.41QTGKK232 pKa = 10.52LADD235 pKa = 3.61EE236 pKa = 5.03YY237 pKa = 10.88YY238 pKa = 10.3AQKK241 pKa = 10.79GQIPPFVQASLKK253 pKa = 9.94PAIGKK258 pKa = 9.52NYY260 pKa = 8.41YY261 pKa = 9.46QEE263 pKa = 4.33NKK265 pKa = 10.22SKK267 pKa = 10.26IYY269 pKa = 10.63EE270 pKa = 4.08NDD272 pKa = 3.26NIIITGKK279 pKa = 10.81GKK281 pKa = 9.44VLKK284 pKa = 9.94IKK286 pKa = 9.9PPRR289 pKa = 11.84YY290 pKa = 9.0FDD292 pKa = 3.42KK293 pKa = 11.02LYY295 pKa = 11.13DD296 pKa = 3.92LDD298 pKa = 4.41YY299 pKa = 10.52PSDD302 pKa = 3.38MLRR305 pKa = 11.84IKK307 pKa = 10.5KK308 pKa = 9.86LRR310 pKa = 11.84EE311 pKa = 3.5RR312 pKa = 11.84KK313 pKa = 9.85AMNGLLLKK321 pKa = 8.72TQNTSLDD328 pKa = 3.55YY329 pKa = 11.38LEE331 pKa = 4.02QLKK334 pKa = 10.36IEE336 pKa = 4.22EE337 pKa = 5.04DD338 pKa = 4.1YY339 pKa = 10.58LTEE342 pKa = 3.87RR343 pKa = 11.84TTTLKK348 pKa = 9.76RR349 pKa = 11.84TNAEE353 pKa = 3.81AA354 pKa = 3.93

Molecular weight: 41.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1536

88

571

256.0

29.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.641 ± 1.872

1.432 ± 0.728

4.883 ± 0.65

8.398 ± 1.773

2.539 ± 0.548

6.641 ± 1.057

1.628 ± 0.396

7.096 ± 1.281

7.422 ± 1.673

6.51 ± 0.837

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.734 ± 0.364

6.576 ± 0.911

3.711 ± 1.087

4.557 ± 0.501

3.776 ± 0.345

7.747 ± 3.347

6.706 ± 0.868

3.19 ± 1.06

2.279 ± 0.225

5.534 ± 0.674
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski