Mesocricetus auratus papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Pipapillomavirus; Pipapillomavirus 1

Average proteome isoelectric point is 6.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U6ELS6|U6ELS6_9PAPI Protein E7 OS=Mesocricetus auratus papillomavirus 1 OX=1408129 GN=E7 PE=3 SV=1
MM1 pKa = 6.87VAANRR6 pKa = 11.84ARR8 pKa = 11.84RR9 pKa = 11.84VKK11 pKa = 10.38RR12 pKa = 11.84DD13 pKa = 3.24SAEE16 pKa = 3.68NLYY19 pKa = 10.02RR20 pKa = 11.84QCQITGNCPPDD31 pKa = 3.47VVNKK35 pKa = 10.28VEE37 pKa = 4.13GTTLADD43 pKa = 3.33KK44 pKa = 9.14LTKK47 pKa = 10.05IFASILYY54 pKa = 10.19LGGLGIGTGRR64 pKa = 11.84GTGGATGYY72 pKa = 11.23GPINPGGGRR81 pKa = 11.84ITGTGTVMRR90 pKa = 11.84PGVVIEE96 pKa = 4.19PVGPGDD102 pKa = 3.56IVSVGATDD110 pKa = 3.67SSIVPLLEE118 pKa = 4.09ATPDD122 pKa = 3.28IPIEE126 pKa = 4.48GGPEE130 pKa = 3.79VPPAGPDD137 pKa = 3.19VSTVDD142 pKa = 3.03VTANVDD148 pKa = 4.11PISDD152 pKa = 3.69INVTSSTTITNPDD165 pKa = 3.32SAVIDD170 pKa = 3.93VQPAPSGPRR179 pKa = 11.84RR180 pKa = 11.84VTVSRR185 pKa = 11.84SEE187 pKa = 4.07FQNASYY193 pKa = 11.39VSVTHH198 pKa = 6.8PSQGLGEE205 pKa = 4.33SGGAVISADD214 pKa = 3.1AGGSVVSSSHH224 pKa = 5.69EE225 pKa = 3.95LDD227 pKa = 3.23VGILIGGRR235 pKa = 11.84PPGNLSEE242 pKa = 4.23FQTIEE247 pKa = 3.89LDD249 pKa = 4.73EE250 pKa = 4.4IVQTQGVDD258 pKa = 3.23DD259 pKa = 4.27FDD261 pKa = 4.56IGEE264 pKa = 4.42GAGRR268 pKa = 11.84AGPDD272 pKa = 2.79TSTPDD277 pKa = 3.23NYY279 pKa = 10.81LGRR282 pKa = 11.84ALSRR286 pKa = 11.84FRR288 pKa = 11.84EE289 pKa = 4.31IYY291 pKa = 9.64EE292 pKa = 4.33RR293 pKa = 11.84PSDD296 pKa = 3.7LYY298 pKa = 9.96TRR300 pKa = 11.84RR301 pKa = 11.84VQQVRR306 pKa = 11.84VRR308 pKa = 11.84NRR310 pKa = 11.84DD311 pKa = 3.25LFLGDD316 pKa = 3.54PGRR319 pKa = 11.84LVTYY323 pKa = 10.03EE324 pKa = 3.81FDD326 pKa = 3.52NPAFEE331 pKa = 5.13GLGEE335 pKa = 4.03DD336 pKa = 4.41TIIFHH341 pKa = 6.45QAPEE345 pKa = 4.13VQAAPDD351 pKa = 4.09EE352 pKa = 4.47DD353 pKa = 4.3FMDD356 pKa = 4.9IIKK359 pKa = 10.7LGRR362 pKa = 11.84QRR364 pKa = 11.84LAQTPGGTVRR374 pKa = 11.84ISRR377 pKa = 11.84LGQRR381 pKa = 11.84GTIRR385 pKa = 11.84TRR387 pKa = 11.84SGLQIGGKK395 pKa = 7.39VHH397 pKa = 6.87FFSDD401 pKa = 4.05LSPIATEE408 pKa = 4.38NIEE411 pKa = 4.18LSPLGEE417 pKa = 3.97ISGEE421 pKa = 3.98AMVVDD426 pKa = 4.58ALSEE430 pKa = 3.98YY431 pKa = 11.25SLISEE436 pKa = 4.63PGIEE440 pKa = 4.44PVPFMDD446 pKa = 5.44EE447 pKa = 4.32DD448 pKa = 3.97LLDD451 pKa = 3.85IQSEE455 pKa = 4.34DD456 pKa = 3.57FSGSRR461 pKa = 11.84LHH463 pKa = 7.19LVRR466 pKa = 11.84TGNRR470 pKa = 11.84FGVIYY475 pKa = 10.06EE476 pKa = 3.9PSEE479 pKa = 3.78NLGARR484 pKa = 11.84TVFPDD489 pKa = 3.15INTGDD494 pKa = 4.9FIRR497 pKa = 11.84YY498 pKa = 5.82PQSNINPADD507 pKa = 3.29ISYY510 pKa = 11.08QDD512 pKa = 5.66LIPLQPGVDD521 pKa = 3.35INVGSIYY528 pKa = 10.24PSVDD532 pKa = 3.37YY533 pKa = 10.69YY534 pKa = 11.14LHH536 pKa = 6.65PSLRR540 pKa = 11.84RR541 pKa = 11.84RR542 pKa = 11.84KK543 pKa = 9.68RR544 pKa = 11.84KK545 pKa = 8.56RR546 pKa = 11.84TLHH549 pKa = 5.67

Molecular weight: 58.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U6ELD1|U6ELD1_9PAPI Minor capsid protein L2 OS=Mesocricetus auratus papillomavirus 1 OX=1408129 GN=L2 PE=3 SV=1
MM1 pKa = 7.85AFPIEE6 pKa = 4.4LPALIQLLNTDD17 pKa = 3.1VTRR20 pKa = 11.84IVLYY24 pKa = 10.74CLFCDD29 pKa = 5.04RR30 pKa = 11.84PLSMQDD36 pKa = 2.65KK37 pKa = 10.15FDD39 pKa = 3.8YY40 pKa = 10.76FGAGLKK46 pKa = 9.02VVCRR50 pKa = 11.84KK51 pKa = 10.17GGMRR55 pKa = 11.84IACMSCRR62 pKa = 11.84RR63 pKa = 11.84ALAYY67 pKa = 10.4AEE69 pKa = 4.47DD70 pKa = 3.99LRR72 pKa = 11.84HH73 pKa = 5.57RR74 pKa = 11.84QCTAEE79 pKa = 4.12GDD81 pKa = 3.73LVEE84 pKa = 5.66RR85 pKa = 11.84ITGKK89 pKa = 10.35SLLHH93 pKa = 6.68IDD95 pKa = 3.88VRR97 pKa = 11.84CIACLCRR104 pKa = 11.84LGPSEE109 pKa = 4.8KK110 pKa = 10.52LLAKK114 pKa = 10.35ASHH117 pKa = 6.14KK118 pKa = 10.22PFYY121 pKa = 10.34LVRR124 pKa = 11.84SLWRR128 pKa = 11.84GPCRR132 pKa = 11.84KK133 pKa = 9.75CFLLL137 pKa = 5.23

Molecular weight: 15.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2514

137

608

359.1

40.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.444 ± 0.582

2.426 ± 0.707

6.762 ± 0.524

5.688 ± 0.643

4.097 ± 0.551

7.08 ± 1.129

1.671 ± 0.12

4.574 ± 0.797

4.733 ± 0.819

9.109 ± 0.623

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.71 ± 0.225

3.699 ± 0.62

7.518 ± 1.241

4.375 ± 0.566

6.484 ± 0.636

7.16 ± 0.659

5.927 ± 0.442

6.086 ± 0.749

1.034 ± 0.309

3.421 ± 0.404
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski