Torque teno Leptonychotes weddellii virus-1

Taxonomy: Viruses; Anelloviridae; Lambdatorquevirus; Torque teno pinniped virus 8

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Z2RVW0|A0A1Z2RVW0_9VIRU ORF2 OS=Torque teno Leptonychotes weddellii virus-1 OX=2012676 PE=4 SV=1
MM1 pKa = 7.24ISYY4 pKa = 10.5RR5 pKa = 11.84EE6 pKa = 3.93TSTQTEE12 pKa = 4.5CSRR15 pKa = 11.84KK16 pKa = 9.19EE17 pKa = 3.85LMRR20 pKa = 11.84EE21 pKa = 3.6LLEE24 pKa = 5.55IIDD27 pKa = 3.93VTSQPEE33 pKa = 3.94WGMSPIGSPPEE44 pKa = 4.15SEE46 pKa = 4.35SDD48 pKa = 3.3SDD50 pKa = 4.4SLIEE54 pKa = 4.12NSSTGSGSSSEE65 pKa = 4.96FYY67 pKa = 10.46WEE69 pKa = 5.41DD70 pKa = 3.13EE71 pKa = 4.4TNPGGEE77 pKa = 4.56GPPLVPPQQ85 pKa = 3.45

Molecular weight: 9.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Z2RVY6|A0A1Z2RVY6_9VIRU Capsid protein OS=Torque teno Leptonychotes weddellii virus-1 OX=2012676 PE=3 SV=1
MM1 pKa = 7.84AYY3 pKa = 10.03RR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84WRR9 pKa = 11.84KK10 pKa = 7.57PRR12 pKa = 11.84RR13 pKa = 11.84SRR15 pKa = 11.84WRR17 pKa = 11.84TYY19 pKa = 9.7RR20 pKa = 11.84RR21 pKa = 11.84NRR23 pKa = 11.84YY24 pKa = 5.39WRR26 pKa = 11.84RR27 pKa = 11.84PHH29 pKa = 5.97RR30 pKa = 11.84RR31 pKa = 11.84HH32 pKa = 4.26WRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84YY38 pKa = 9.27IRR40 pKa = 11.84PRR42 pKa = 11.84TATVRR47 pKa = 11.84YY48 pKa = 8.07YY49 pKa = 10.09PSRR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84KK55 pKa = 9.59RR56 pKa = 11.84ISVRR60 pKa = 11.84GWEE63 pKa = 4.02PLGNVCSSDD72 pKa = 3.19IASSEE77 pKa = 3.88ATPYY81 pKa = 10.53TDD83 pKa = 5.02LDD85 pKa = 3.97MYY87 pKa = 11.17DD88 pKa = 4.73LSPLEE93 pKa = 4.78DD94 pKa = 3.42DD95 pKa = 3.27TRR97 pKa = 11.84KK98 pKa = 10.65YY99 pKa = 9.38KK100 pKa = 10.89GKK102 pKa = 8.35WHH104 pKa = 5.96GTWGHH109 pKa = 6.25HH110 pKa = 5.49FFTLRR115 pKa = 11.84SLLVRR120 pKa = 11.84AKK122 pKa = 10.79YY123 pKa = 9.84YY124 pKa = 10.56FNYY127 pKa = 9.34WSSDD131 pKa = 2.91WEE133 pKa = 4.56GYY135 pKa = 10.88DD136 pKa = 3.4YY137 pKa = 11.83VKK139 pKa = 10.96FKK141 pKa = 10.99GGYY144 pKa = 7.56IWIPRR149 pKa = 11.84MTYY152 pKa = 10.13FSWIFYY158 pKa = 9.97LDD160 pKa = 3.53SSIQSNPRR168 pKa = 11.84EE169 pKa = 4.34DD170 pKa = 4.3GEE172 pKa = 4.33PEE174 pKa = 3.7AKK176 pKa = 10.05YY177 pKa = 10.28KK178 pKa = 10.55YY179 pKa = 8.95EE180 pKa = 4.28KK181 pKa = 10.3SWLHH185 pKa = 6.31PGILLNRR192 pKa = 11.84PGSKK196 pKa = 10.56LMISSLQQPNRR207 pKa = 11.84PFYY210 pKa = 10.8RR211 pKa = 11.84RR212 pKa = 11.84IKK214 pKa = 8.54VTPPSAWEE222 pKa = 3.75GNYY225 pKa = 10.57RR226 pKa = 11.84MDD228 pKa = 3.3TAMDD232 pKa = 3.61YY233 pKa = 11.58LLFHH237 pKa = 7.05WGWTVCNVTASFFDD251 pKa = 4.35FFCQRR256 pKa = 11.84KK257 pKa = 9.28RR258 pKa = 11.84SATHH262 pKa = 6.76NDD264 pKa = 3.39TCPTTPWFIHH274 pKa = 6.07DD275 pKa = 4.27SCWKK279 pKa = 10.03QGITANEE286 pKa = 3.73VCKK289 pKa = 10.45AIKK292 pKa = 9.6EE293 pKa = 4.28VYY295 pKa = 10.02DD296 pKa = 4.67RR297 pKa = 11.84INKK300 pKa = 8.93RR301 pKa = 11.84HH302 pKa = 6.56LDD304 pKa = 3.66PRR306 pKa = 11.84SVWVNRR312 pKa = 11.84KK313 pKa = 8.34MYY315 pKa = 10.41IKK317 pKa = 9.84SDD319 pKa = 3.76CVNTPNSNSVPSNCHH334 pKa = 3.44NWGPFLPQNVILEE347 pKa = 4.45TSTGNSLYY355 pKa = 10.33FRR357 pKa = 11.84YY358 pKa = 10.29KK359 pKa = 10.73LFFEE363 pKa = 4.55VSGDD367 pKa = 3.24SLYY370 pKa = 10.72RR371 pKa = 11.84RR372 pKa = 11.84QPSQPCKK379 pKa = 10.74DD380 pKa = 3.58GVIPPAPGAEE390 pKa = 4.33SACPEE395 pKa = 3.47ISTRR399 pKa = 11.84SIYY402 pKa = 10.17KK403 pKa = 9.77KK404 pKa = 10.14KK405 pKa = 10.3KK406 pKa = 8.92RR407 pKa = 11.84PQSIYY412 pKa = 10.75DD413 pKa = 3.62ILQGDD418 pKa = 4.61LDD420 pKa = 4.41SDD422 pKa = 3.81GMLTEE427 pKa = 4.41RR428 pKa = 11.84AYY430 pKa = 10.5EE431 pKa = 4.52RR432 pKa = 11.84ITGDD436 pKa = 3.45NRR438 pKa = 11.84CDD440 pKa = 3.23QPTRR444 pKa = 11.84MGDD447 pKa = 3.35VPHH450 pKa = 7.05RR451 pKa = 11.84VPPRR455 pKa = 11.84KK456 pKa = 9.1RR457 pKa = 11.84VRR459 pKa = 11.84FRR461 pKa = 11.84LSDD464 pKa = 3.28RR465 pKa = 11.84KK466 pKa = 9.39LQHH469 pKa = 6.8RR470 pKa = 11.84KK471 pKa = 9.72RR472 pKa = 11.84EE473 pKa = 4.28LIRR476 pKa = 11.84ILLGRR481 pKa = 11.84RR482 pKa = 11.84DD483 pKa = 3.57QPRR486 pKa = 11.84GGGSPPSPPPVEE498 pKa = 4.35EE499 pKa = 4.6PLDD502 pKa = 3.86LLLNFPKK509 pKa = 10.71

Molecular weight: 60.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

767

80

509

191.8

22.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.738 ± 0.961

2.347 ± 0.44

5.737 ± 0.572

5.606 ± 2.174

3.781 ± 0.843

7.301 ± 2.728

2.608 ± 0.642

5.215 ± 0.845

4.954 ± 1.079

7.823 ± 2.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.956 ± 0.382

3.651 ± 0.533

7.953 ± 0.876

2.999 ± 0.635

9.778 ± 3.304

8.735 ± 2.099

4.694 ± 0.824

4.042 ± 1.086

3.259 ± 0.525

4.824 ± 1.186
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski