Leshenault partiti-like virus

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 8.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Z2RT46|A0A1Z2RT46_9VIRU RdRp OS=Leshenault partiti-like virus OX=2010278 PE=4 SV=1
MM1 pKa = 6.75QASRR5 pKa = 11.84MLEE8 pKa = 3.8SHH10 pKa = 6.39RR11 pKa = 11.84VWGEE15 pKa = 3.59YY16 pKa = 7.87RR17 pKa = 11.84THH19 pKa = 7.16RR20 pKa = 11.84LLEE23 pKa = 4.22AHH25 pKa = 7.37DD26 pKa = 5.42GRR28 pKa = 11.84ATWLRR33 pKa = 11.84AWTKK37 pKa = 10.23SWAPRR42 pKa = 11.84QGVVEE47 pKa = 4.18STPEE51 pKa = 3.78AEE53 pKa = 4.01KK54 pKa = 10.7HH55 pKa = 5.5VGVMTYY61 pKa = 10.32VKK63 pKa = 9.87GWRR66 pKa = 11.84RR67 pKa = 11.84RR68 pKa = 11.84LRR70 pKa = 11.84RR71 pKa = 11.84QLRR74 pKa = 11.84SARR77 pKa = 11.84TQFEE81 pKa = 4.24RR82 pKa = 11.84EE83 pKa = 4.19VVHH86 pKa = 6.55GSWAALEE93 pKa = 4.18GLYY96 pKa = 10.49SEE98 pKa = 5.4ALEE101 pKa = 4.81HH102 pKa = 6.64SPTMDD107 pKa = 3.24LMYY110 pKa = 11.0GHH112 pKa = 6.75VLSLSVDD119 pKa = 3.49RR120 pKa = 11.84DD121 pKa = 3.41HH122 pKa = 7.5GFTRR126 pKa = 11.84SFPSWYY132 pKa = 9.64VSPAGFEE139 pKa = 3.78NVPIVKK145 pKa = 8.82RR146 pKa = 11.84TTAKK150 pKa = 10.9DD151 pKa = 3.1PFTRR155 pKa = 11.84MVEE158 pKa = 4.04TGPTGIVARR167 pKa = 11.84TMMKK171 pKa = 10.29VGGRR175 pKa = 11.84PQKK178 pKa = 10.03FTDD181 pKa = 3.43AAATSLAYY189 pKa = 9.41KK190 pKa = 9.21WLHH193 pKa = 5.59ATGLWSSVTDD203 pKa = 3.67ADD205 pKa = 4.04VVINVSASFDD215 pKa = 3.4TSRR218 pKa = 11.84VHH220 pKa = 5.78MEE222 pKa = 4.03KK223 pKa = 9.68FTAPRR228 pKa = 11.84PPTEE232 pKa = 4.29GTLDD236 pKa = 3.55MCWEE240 pKa = 4.21VVARR244 pKa = 11.84NFKK247 pKa = 9.76EE248 pKa = 4.0LGMTGLPWITVADD261 pKa = 4.65VIAPHH266 pKa = 6.76INGDD270 pKa = 3.7ACPGLLTSRR279 pKa = 11.84IYY281 pKa = 9.73RR282 pKa = 11.84TRR284 pKa = 11.84AQASSCTTSDD294 pKa = 3.21VVALFEE300 pKa = 4.37ALRR303 pKa = 11.84TQEE306 pKa = 4.73LLCALPWAAGGRR318 pKa = 11.84EE319 pKa = 3.79KK320 pKa = 10.69RR321 pKa = 11.84QEE323 pKa = 4.12RR324 pKa = 11.84LVGDD328 pKa = 3.72QVSSRR333 pKa = 11.84LVQMPEE339 pKa = 3.76DD340 pKa = 3.38VLARR344 pKa = 11.84LEE346 pKa = 4.27SAVAGPLLQRR356 pKa = 11.84LKK358 pKa = 9.8WVKK361 pKa = 10.39RR362 pKa = 11.84DD363 pKa = 3.16IALGMSFFRR372 pKa = 11.84GRR374 pKa = 11.84AQRR377 pKa = 11.84FFHH380 pKa = 7.19RR381 pKa = 11.84FDD383 pKa = 3.17TCTHH387 pKa = 5.6VKK389 pKa = 10.49SFDD392 pKa = 2.93WSAFDD397 pKa = 3.61SSVGEE402 pKa = 4.12TLIVASFSLLRR413 pKa = 11.84ACYY416 pKa = 9.9PEE418 pKa = 4.72GQHH421 pKa = 6.6ADD423 pKa = 3.31NVFKK427 pKa = 11.13YY428 pKa = 9.68ILSAFVHH435 pKa = 5.85KK436 pKa = 10.29HH437 pKa = 5.92LIVPQGDD444 pKa = 4.06VIGMHH449 pKa = 6.74RR450 pKa = 11.84GIPSGSGLTSLVGSVANWLILRR472 pKa = 11.84TTLTDD477 pKa = 3.28ICPPLLAQRR486 pKa = 11.84AEE488 pKa = 4.22VAVLGDD494 pKa = 3.42DD495 pKa = 3.58TLIGFRR501 pKa = 11.84GYY503 pKa = 11.14DD504 pKa = 3.99GIPTNAEE511 pKa = 3.44FTARR515 pKa = 11.84AFALWGVAAGPSPSMVYY532 pKa = 10.35PEE534 pKa = 4.51GPPRR538 pKa = 11.84SVYY541 pKa = 10.5LEE543 pKa = 3.97RR544 pKa = 11.84CQTFLSVTSWCGLPSWRR561 pKa = 11.84NRR563 pKa = 11.84EE564 pKa = 3.66WWVMDD569 pKa = 3.04MGYY572 pKa = 11.08AKK574 pKa = 10.28GQPDD578 pKa = 3.47VANAQVAALEE588 pKa = 4.35DD589 pKa = 3.65AGFSGFAPQLRR600 pKa = 11.84GTRR603 pKa = 11.84RR604 pKa = 11.84RR605 pKa = 11.84FQKK608 pKa = 9.66WLQKK612 pKa = 10.53QPGAHH617 pKa = 6.2MLHH620 pKa = 6.83PEE622 pKa = 4.12YY623 pKa = 11.08VEE625 pKa = 4.02STEE628 pKa = 4.54TITQGWMARR637 pKa = 11.84AHH639 pKa = 6.41SSTGTAKK646 pKa = 10.35EE647 pKa = 3.69LAAFDD652 pKa = 4.07WDD654 pKa = 4.49SKK656 pKa = 10.39GQHH659 pKa = 6.38PGNWPTRR666 pKa = 11.84WKK668 pKa = 10.34VAAEE672 pKa = 3.99AAPPPHH678 pKa = 6.76KK679 pKa = 11.05AEE681 pKa = 4.16VLYY684 pKa = 10.07GAPGTRR690 pKa = 11.84TVFEE694 pKa = 5.02LNWARR699 pKa = 11.84TRR701 pKa = 11.84KK702 pKa = 10.08GKK704 pKa = 10.55VGLRR708 pKa = 11.84LPVYY712 pKa = 8.96EE713 pKa = 4.52GSRR716 pKa = 11.84APVLAAEE723 pKa = 4.58MFRR726 pKa = 11.84YY727 pKa = 8.0TRR729 pKa = 11.84VGLARR734 pKa = 11.84VSEE737 pKa = 4.02EE738 pKa = 3.92LYY740 pKa = 10.65LRR742 pKa = 11.84EE743 pKa = 4.18SGIVPPDD750 pKa = 3.4VRR752 pKa = 11.84RR753 pKa = 11.84GRR755 pKa = 11.84AWKK758 pKa = 10.27CGLAVAILALGAALGYY774 pKa = 8.38TVYY777 pKa = 10.78ARR779 pKa = 11.84PPPKK783 pKa = 10.28PPDD786 pKa = 3.55PSVTVRR792 pKa = 11.84TGGTSS797 pKa = 2.79

Molecular weight: 88.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Z2RT46|A0A1Z2RT46_9VIRU RdRp OS=Leshenault partiti-like virus OX=2010278 PE=4 SV=1
MM1 pKa = 6.75QASRR5 pKa = 11.84MLEE8 pKa = 3.8SHH10 pKa = 6.39RR11 pKa = 11.84VWGEE15 pKa = 3.59YY16 pKa = 7.87RR17 pKa = 11.84THH19 pKa = 7.16RR20 pKa = 11.84LLEE23 pKa = 4.22AHH25 pKa = 7.37DD26 pKa = 5.42GRR28 pKa = 11.84ATWLRR33 pKa = 11.84AWTKK37 pKa = 10.23SWAPRR42 pKa = 11.84QGVVEE47 pKa = 4.18STPEE51 pKa = 3.78AEE53 pKa = 4.01KK54 pKa = 10.7HH55 pKa = 5.5VGVMTYY61 pKa = 10.32VKK63 pKa = 9.87GWRR66 pKa = 11.84RR67 pKa = 11.84RR68 pKa = 11.84LRR70 pKa = 11.84RR71 pKa = 11.84QLRR74 pKa = 11.84SARR77 pKa = 11.84TQFEE81 pKa = 4.24RR82 pKa = 11.84EE83 pKa = 4.19VVHH86 pKa = 6.55GSWAALEE93 pKa = 4.18GLYY96 pKa = 10.49SEE98 pKa = 5.4ALEE101 pKa = 4.81HH102 pKa = 6.64SPTMDD107 pKa = 3.24LMYY110 pKa = 11.0GHH112 pKa = 6.75VLSLSVDD119 pKa = 3.49RR120 pKa = 11.84DD121 pKa = 3.41HH122 pKa = 7.5GFTRR126 pKa = 11.84SFPSWYY132 pKa = 9.64VSPAGFEE139 pKa = 3.78NVPIVKK145 pKa = 8.82RR146 pKa = 11.84TTAKK150 pKa = 10.9DD151 pKa = 3.1PFTRR155 pKa = 11.84MVEE158 pKa = 4.04TGPTGIVARR167 pKa = 11.84TMMKK171 pKa = 10.29VGGRR175 pKa = 11.84PQKK178 pKa = 10.03FTDD181 pKa = 3.43AAATSLAYY189 pKa = 9.41KK190 pKa = 9.21WLHH193 pKa = 5.59ATGLWSSVTDD203 pKa = 3.67ADD205 pKa = 4.04VVINVSASFDD215 pKa = 3.4TSRR218 pKa = 11.84VHH220 pKa = 5.78MEE222 pKa = 4.03KK223 pKa = 9.68FTAPRR228 pKa = 11.84PPTEE232 pKa = 4.29GTLDD236 pKa = 3.55MCWEE240 pKa = 4.21VVARR244 pKa = 11.84NFKK247 pKa = 9.76EE248 pKa = 4.0LGMTGLPWITVADD261 pKa = 4.65VIAPHH266 pKa = 6.76INGDD270 pKa = 3.7ACPGLLTSRR279 pKa = 11.84IYY281 pKa = 9.73RR282 pKa = 11.84TRR284 pKa = 11.84AQASSCTTSDD294 pKa = 3.21VVALFEE300 pKa = 4.37ALRR303 pKa = 11.84TQEE306 pKa = 4.73LLCALPWAAGGRR318 pKa = 11.84EE319 pKa = 3.79KK320 pKa = 10.69RR321 pKa = 11.84QEE323 pKa = 4.12RR324 pKa = 11.84LVGDD328 pKa = 3.72QVSSRR333 pKa = 11.84LVQMPEE339 pKa = 3.76DD340 pKa = 3.38VLARR344 pKa = 11.84LEE346 pKa = 4.27SAVAGPLLQRR356 pKa = 11.84LKK358 pKa = 9.8WVKK361 pKa = 10.39RR362 pKa = 11.84DD363 pKa = 3.16IALGMSFFRR372 pKa = 11.84GRR374 pKa = 11.84AQRR377 pKa = 11.84FFHH380 pKa = 7.19RR381 pKa = 11.84FDD383 pKa = 3.17TCTHH387 pKa = 5.6VKK389 pKa = 10.49SFDD392 pKa = 2.93WSAFDD397 pKa = 3.61SSVGEE402 pKa = 4.12TLIVASFSLLRR413 pKa = 11.84ACYY416 pKa = 9.9PEE418 pKa = 4.72GQHH421 pKa = 6.6ADD423 pKa = 3.31NVFKK427 pKa = 11.13YY428 pKa = 9.68ILSAFVHH435 pKa = 5.85KK436 pKa = 10.29HH437 pKa = 5.92LIVPQGDD444 pKa = 4.06VIGMHH449 pKa = 6.74RR450 pKa = 11.84GIPSGSGLTSLVGSVANWLILRR472 pKa = 11.84TTLTDD477 pKa = 3.28ICPPLLAQRR486 pKa = 11.84AEE488 pKa = 4.22VAVLGDD494 pKa = 3.42DD495 pKa = 3.58TLIGFRR501 pKa = 11.84GYY503 pKa = 11.14DD504 pKa = 3.99GIPTNAEE511 pKa = 3.44FTARR515 pKa = 11.84AFALWGVAAGPSPSMVYY532 pKa = 10.35PEE534 pKa = 4.51GPPRR538 pKa = 11.84SVYY541 pKa = 10.5LEE543 pKa = 3.97RR544 pKa = 11.84CQTFLSVTSWCGLPSWRR561 pKa = 11.84NRR563 pKa = 11.84EE564 pKa = 3.66WWVMDD569 pKa = 3.04MGYY572 pKa = 11.08AKK574 pKa = 10.28GQPDD578 pKa = 3.47VANAQVAALEE588 pKa = 4.35DD589 pKa = 3.65AGFSGFAPQLRR600 pKa = 11.84GTRR603 pKa = 11.84RR604 pKa = 11.84RR605 pKa = 11.84FQKK608 pKa = 9.66WLQKK612 pKa = 10.53QPGAHH617 pKa = 6.2MLHH620 pKa = 6.83PEE622 pKa = 4.12YY623 pKa = 11.08VEE625 pKa = 4.02STEE628 pKa = 4.54TITQGWMARR637 pKa = 11.84AHH639 pKa = 6.41SSTGTAKK646 pKa = 10.35EE647 pKa = 3.69LAAFDD652 pKa = 4.07WDD654 pKa = 4.49SKK656 pKa = 10.39GQHH659 pKa = 6.38PGNWPTRR666 pKa = 11.84WKK668 pKa = 10.34VAAEE672 pKa = 3.99AAPPPHH678 pKa = 6.76KK679 pKa = 11.05AEE681 pKa = 4.16VLYY684 pKa = 10.07GAPGTRR690 pKa = 11.84TVFEE694 pKa = 5.02LNWARR699 pKa = 11.84TRR701 pKa = 11.84KK702 pKa = 10.08GKK704 pKa = 10.55VGLRR708 pKa = 11.84LPVYY712 pKa = 8.96EE713 pKa = 4.52GSRR716 pKa = 11.84APVLAAEE723 pKa = 4.58MFRR726 pKa = 11.84YY727 pKa = 8.0TRR729 pKa = 11.84VGLARR734 pKa = 11.84VSEE737 pKa = 4.02EE738 pKa = 3.92LYY740 pKa = 10.65LRR742 pKa = 11.84EE743 pKa = 4.18SGIVPPDD750 pKa = 3.4VRR752 pKa = 11.84RR753 pKa = 11.84GRR755 pKa = 11.84AWKK758 pKa = 10.27CGLAVAILALGAALGYY774 pKa = 8.38TVYY777 pKa = 10.78ARR779 pKa = 11.84PPPKK783 pKa = 10.28PPDD786 pKa = 3.55PSVTVRR792 pKa = 11.84TGGTSS797 pKa = 2.79

Molecular weight: 88.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

797

797

797

797.0

88.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.414 ± 0.0

1.255 ± 0.0

4.015 ± 0.0

5.395 ± 0.0

3.764 ± 0.0

8.156 ± 0.0

2.76 ± 0.0

2.509 ± 0.0

3.388 ± 0.0

8.532 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.509 ± 0.0

1.38 ± 0.0

6.274 ± 0.0

3.011 ± 0.0

8.657 ± 0.0

6.775 ± 0.0

7.026 ± 0.0

8.281 ± 0.0

3.388 ± 0.0

2.509 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski