Carp edema virus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; unclassified Poxviridae

Average proteome isoelectric point is 5.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5B7QBP8|A0A5B7QBP8_9POXV Major core protein 4a precursor OS=Carp edema virus OX=1653087 GN=P4a PE=3 SV=1
MM1 pKa = 7.1VATAAARR8 pKa = 11.84DD9 pKa = 3.76PEE11 pKa = 4.63LRR13 pKa = 11.84DD14 pKa = 3.37SNYY17 pKa = 10.35VMAAPAANPFANMVKK32 pKa = 10.26FDD34 pKa = 4.47IPDD37 pKa = 3.7IYY39 pKa = 11.05QFAEE43 pKa = 3.93IGLQQIKK50 pKa = 7.88MTTLHH55 pKa = 6.06YY56 pKa = 10.66CDD58 pKa = 4.84FVSKK62 pKa = 10.46VLPHH66 pKa = 6.55PNYY69 pKa = 9.99VVKK72 pKa = 10.72KK73 pKa = 10.12DD74 pKa = 3.12IGYY77 pKa = 10.17VDD79 pKa = 4.9TIPEE83 pKa = 3.92QVKK86 pKa = 9.9IANAMFWKK94 pKa = 10.43GIQIDD99 pKa = 4.22DD100 pKa = 3.85WNKK103 pKa = 9.57MNVFDD108 pKa = 5.49KK109 pKa = 11.3TMTSNLALVLGLYY122 pKa = 10.72DD123 pKa = 3.25EE124 pKa = 4.61TVYY127 pKa = 10.83FKK129 pKa = 11.41NSTNKK134 pKa = 9.92FEE136 pKa = 4.3ITFCGILDD144 pKa = 3.95QIPQGVAVKK153 pKa = 9.74RR154 pKa = 11.84VCFLPYY160 pKa = 10.48KK161 pKa = 10.2LGNATIYY168 pKa = 8.5KK169 pKa = 7.62TLKK172 pKa = 10.34HH173 pKa = 6.25VSTQIWEE180 pKa = 4.14GFYY183 pKa = 11.28ANGNLITNIKK193 pKa = 9.57QLQKK197 pKa = 9.68VTNDD201 pKa = 3.13EE202 pKa = 4.34KK203 pKa = 10.87KK204 pKa = 9.05TLGLTKK210 pKa = 9.47TQYY213 pKa = 11.28TNFIDD218 pKa = 4.77NINLSTLDD226 pKa = 3.53TPYY229 pKa = 11.31KK230 pKa = 10.58LLAFYY235 pKa = 7.49CTCRR239 pKa = 11.84YY240 pKa = 9.72KK241 pKa = 11.4DD242 pKa = 3.83NDD244 pKa = 3.6PAANKK249 pKa = 9.59VLYY252 pKa = 9.9KK253 pKa = 10.32IPSNKK258 pKa = 9.64AVLNLIWILLTKK270 pKa = 10.16LGYY273 pKa = 10.2VIRR276 pKa = 11.84STTNTKK282 pKa = 9.32TDD284 pKa = 3.29EE285 pKa = 4.26TSFKK289 pKa = 10.68VFPSFTKK296 pKa = 9.66QSLRR300 pKa = 11.84AKK302 pKa = 10.31VIAALRR308 pKa = 11.84KK309 pKa = 10.01DD310 pKa = 3.78GNNVEE315 pKa = 4.76AADD318 pKa = 3.85TLINNCEE325 pKa = 3.87PLILFIYY332 pKa = 10.37NFLSYY337 pKa = 10.54PSATKK342 pKa = 10.39ACADD346 pKa = 3.11IAGAGKK352 pKa = 10.39GSKK355 pKa = 10.03EE356 pKa = 4.04DD357 pKa = 3.56TSGGDD362 pKa = 3.39TLSVEE367 pKa = 4.08NDD369 pKa = 4.42PIPFYY374 pKa = 11.25HH375 pKa = 7.11NINIQEE381 pKa = 4.33LLLTEE386 pKa = 4.47SGEE389 pKa = 4.05EE390 pKa = 4.04LKK392 pKa = 10.9NCRR395 pKa = 11.84PFKK398 pKa = 10.68NCIDD402 pKa = 3.76NFKK405 pKa = 10.19KK406 pKa = 10.39AVYY409 pKa = 7.31EE410 pKa = 4.08APMKK414 pKa = 10.87DD415 pKa = 4.48DD416 pKa = 3.38ILEE419 pKa = 4.24FADD422 pKa = 4.66SIKK425 pKa = 10.76SSYY428 pKa = 9.76PEE430 pKa = 3.61HH431 pKa = 6.72LRR433 pKa = 11.84WNLAVSGSVDD443 pKa = 3.27GSIINADD450 pKa = 3.83NIVDD454 pKa = 3.58IVEE457 pKa = 4.68KK458 pKa = 10.68SVQHH462 pKa = 6.47DD463 pKa = 3.55FNNIFRR469 pKa = 11.84SEE471 pKa = 4.33SEE473 pKa = 4.33DD474 pKa = 3.28VAAGYY479 pKa = 9.56GIKK482 pKa = 10.37DD483 pKa = 2.97IFEE486 pKa = 4.15QLEE489 pKa = 4.36SEE491 pKa = 4.39TTEE494 pKa = 4.32LEE496 pKa = 3.82SNYY499 pKa = 9.94IVDD502 pKa = 4.23EE503 pKa = 4.14LAKK506 pKa = 10.37QLVSSRR512 pKa = 11.84QIQRR516 pKa = 11.84MTTRR520 pKa = 11.84PGHH523 pKa = 4.86FLKK526 pKa = 10.8RR527 pKa = 11.84IPEE530 pKa = 3.81YY531 pKa = 10.75ALRR534 pKa = 11.84HH535 pKa = 5.43RR536 pKa = 11.84SMLKK540 pKa = 8.45TGEE543 pKa = 4.03DD544 pKa = 2.51VGYY547 pKa = 10.33IMNSMVSNMKK557 pKa = 10.35ALEE560 pKa = 4.13KK561 pKa = 9.67THH563 pKa = 6.09GVEE566 pKa = 3.73INADD570 pKa = 3.55VKK572 pKa = 10.8EE573 pKa = 4.55VIAKK577 pKa = 9.38QGNAIIKK584 pKa = 9.78NLYY587 pKa = 9.76SLYY590 pKa = 8.56KK591 pKa = 8.15TCVVVDD597 pKa = 5.01FTRR600 pKa = 11.84GLLEE604 pKa = 4.31FIGRR608 pKa = 11.84GGSANKK614 pKa = 10.01HH615 pKa = 5.74GLDD618 pKa = 3.36EE619 pKa = 4.29TDD621 pKa = 3.84IDD623 pKa = 4.65SEE625 pKa = 4.55TLNVIYY631 pKa = 10.73NHH633 pKa = 6.81IKK635 pKa = 10.31PSLTSNLNAYY645 pKa = 7.51QTTINKK651 pKa = 9.63IIEE654 pKa = 4.37KK655 pKa = 10.37VSGEE659 pKa = 4.17LGVQSEE665 pKa = 4.55EE666 pKa = 4.08LEE668 pKa = 4.25AANEE672 pKa = 4.04EE673 pKa = 4.52LFF675 pKa = 4.46

Molecular weight: 75.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5B7QBP8|A0A5B7QBP8_9POXV Major core protein 4a precursor OS=Carp edema virus OX=1653087 GN=P4a PE=3 SV=1
MM1 pKa = 7.1VATAAARR8 pKa = 11.84DD9 pKa = 3.76PEE11 pKa = 4.63LRR13 pKa = 11.84DD14 pKa = 3.37SNYY17 pKa = 10.35VMAAPAANPFANMVKK32 pKa = 10.26FDD34 pKa = 4.47IPDD37 pKa = 3.7IYY39 pKa = 11.05QFAEE43 pKa = 3.93IGLQQIKK50 pKa = 7.88MTTLHH55 pKa = 6.06YY56 pKa = 10.66CDD58 pKa = 4.84FVSKK62 pKa = 10.46VLPHH66 pKa = 6.55PNYY69 pKa = 9.99VVKK72 pKa = 10.72KK73 pKa = 10.12DD74 pKa = 3.12IGYY77 pKa = 10.17VDD79 pKa = 4.9TIPEE83 pKa = 3.92QVKK86 pKa = 9.9IANAMFWKK94 pKa = 10.43GIQIDD99 pKa = 4.22DD100 pKa = 3.85WNKK103 pKa = 9.57MNVFDD108 pKa = 5.49KK109 pKa = 11.3TMTSNLALVLGLYY122 pKa = 10.72DD123 pKa = 3.25EE124 pKa = 4.61TVYY127 pKa = 10.83FKK129 pKa = 11.41NSTNKK134 pKa = 9.92FEE136 pKa = 4.3ITFCGILDD144 pKa = 3.95QIPQGVAVKK153 pKa = 9.74RR154 pKa = 11.84VCFLPYY160 pKa = 10.48KK161 pKa = 10.2LGNATIYY168 pKa = 8.5KK169 pKa = 7.62TLKK172 pKa = 10.34HH173 pKa = 6.25VSTQIWEE180 pKa = 4.14GFYY183 pKa = 11.28ANGNLITNIKK193 pKa = 9.57QLQKK197 pKa = 9.68VTNDD201 pKa = 3.13EE202 pKa = 4.34KK203 pKa = 10.87KK204 pKa = 9.05TLGLTKK210 pKa = 9.47TQYY213 pKa = 11.28TNFIDD218 pKa = 4.77NINLSTLDD226 pKa = 3.53TPYY229 pKa = 11.31KK230 pKa = 10.58LLAFYY235 pKa = 7.49CTCRR239 pKa = 11.84YY240 pKa = 9.72KK241 pKa = 11.4DD242 pKa = 3.83NDD244 pKa = 3.6PAANKK249 pKa = 9.59VLYY252 pKa = 9.9KK253 pKa = 10.32IPSNKK258 pKa = 9.64AVLNLIWILLTKK270 pKa = 10.16LGYY273 pKa = 10.2VIRR276 pKa = 11.84STTNTKK282 pKa = 9.32TDD284 pKa = 3.29EE285 pKa = 4.26TSFKK289 pKa = 10.68VFPSFTKK296 pKa = 9.66QSLRR300 pKa = 11.84AKK302 pKa = 10.31VIAALRR308 pKa = 11.84KK309 pKa = 10.01DD310 pKa = 3.78GNNVEE315 pKa = 4.76AADD318 pKa = 3.85TLINNCEE325 pKa = 3.87PLILFIYY332 pKa = 10.37NFLSYY337 pKa = 10.54PSATKK342 pKa = 10.39ACADD346 pKa = 3.11IAGAGKK352 pKa = 10.39GSKK355 pKa = 10.03EE356 pKa = 4.04DD357 pKa = 3.56TSGGDD362 pKa = 3.39TLSVEE367 pKa = 4.08NDD369 pKa = 4.42PIPFYY374 pKa = 11.25HH375 pKa = 7.11NINIQEE381 pKa = 4.33LLLTEE386 pKa = 4.47SGEE389 pKa = 4.05EE390 pKa = 4.04LKK392 pKa = 10.9NCRR395 pKa = 11.84PFKK398 pKa = 10.68NCIDD402 pKa = 3.76NFKK405 pKa = 10.19KK406 pKa = 10.39AVYY409 pKa = 7.31EE410 pKa = 4.08APMKK414 pKa = 10.87DD415 pKa = 4.48DD416 pKa = 3.38ILEE419 pKa = 4.24FADD422 pKa = 4.66SIKK425 pKa = 10.76SSYY428 pKa = 9.76PEE430 pKa = 3.61HH431 pKa = 6.72LRR433 pKa = 11.84WNLAVSGSVDD443 pKa = 3.27GSIINADD450 pKa = 3.83NIVDD454 pKa = 3.58IVEE457 pKa = 4.68KK458 pKa = 10.68SVQHH462 pKa = 6.47DD463 pKa = 3.55FNNIFRR469 pKa = 11.84SEE471 pKa = 4.33SEE473 pKa = 4.33DD474 pKa = 3.28VAAGYY479 pKa = 9.56GIKK482 pKa = 10.37DD483 pKa = 2.97IFEE486 pKa = 4.15QLEE489 pKa = 4.36SEE491 pKa = 4.39TTEE494 pKa = 4.32LEE496 pKa = 3.82SNYY499 pKa = 9.94IVDD502 pKa = 4.23EE503 pKa = 4.14LAKK506 pKa = 10.37QLVSSRR512 pKa = 11.84QIQRR516 pKa = 11.84MTTRR520 pKa = 11.84PGHH523 pKa = 4.86FLKK526 pKa = 10.8RR527 pKa = 11.84IPEE530 pKa = 3.81YY531 pKa = 10.75ALRR534 pKa = 11.84HH535 pKa = 5.43RR536 pKa = 11.84SMLKK540 pKa = 8.45TGEE543 pKa = 4.03DD544 pKa = 2.51VGYY547 pKa = 10.33IMNSMVSNMKK557 pKa = 10.35ALEE560 pKa = 4.13KK561 pKa = 9.67THH563 pKa = 6.09GVEE566 pKa = 3.73INADD570 pKa = 3.55VKK572 pKa = 10.8EE573 pKa = 4.55VIAKK577 pKa = 9.38QGNAIIKK584 pKa = 9.78NLYY587 pKa = 9.76SLYY590 pKa = 8.56KK591 pKa = 8.15TCVVVDD597 pKa = 5.01FTRR600 pKa = 11.84GLLEE604 pKa = 4.31FIGRR608 pKa = 11.84GGSANKK614 pKa = 10.01HH615 pKa = 5.74GLDD618 pKa = 3.36EE619 pKa = 4.29TDD621 pKa = 3.84IDD623 pKa = 4.65SEE625 pKa = 4.55TLNVIYY631 pKa = 10.73NHH633 pKa = 6.81IKK635 pKa = 10.31PSLTSNLNAYY645 pKa = 7.51QTTINKK651 pKa = 9.63IIEE654 pKa = 4.37KK655 pKa = 10.37VSGEE659 pKa = 4.17LGVQSEE665 pKa = 4.55EE666 pKa = 4.08LEE668 pKa = 4.25AANEE672 pKa = 4.04EE673 pKa = 4.52LFF675 pKa = 4.46

Molecular weight: 75.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

675

675

675

675.0

75.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.963 ± 0.0

1.481 ± 0.0

6.074 ± 0.0

6.37 ± 0.0

4.296 ± 0.0

5.037 ± 0.0

1.63 ± 0.0

8.148 ± 0.0

8.148 ± 0.0

8.741 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.926 ± 0.0

7.704 ± 0.0

3.407 ± 0.0

3.111 ± 0.0

2.667 ± 0.0

5.926 ± 0.0

6.815 ± 0.0

6.519 ± 0.0

0.741 ± 0.0

4.296 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski