Tortoise microvirus 81

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W6Y4|A0A4P8W6Y4_9VIRU Major capsid protein OS=Tortoise microvirus 81 OX=2583189 PE=4 SV=1
MM1 pKa = 7.93AYY3 pKa = 10.41YY4 pKa = 10.16DD5 pKa = 4.56LKK7 pKa = 11.21SISDD11 pKa = 3.63WGVVASGEE19 pKa = 4.18FHH21 pKa = 7.77DD22 pKa = 5.92LPFNNGRR29 pKa = 11.84TTFNRR34 pKa = 11.84TIITSHH40 pKa = 5.41EE41 pKa = 4.17VFVQVQGLNVDD52 pKa = 3.94PEE54 pKa = 4.47SGEE57 pKa = 4.0VFAPLDD63 pKa = 3.51FFMTVPPGMHH73 pKa = 7.4DD74 pKa = 3.26LTFNLDD80 pKa = 3.86QPAKK84 pKa = 9.01WGWYY88 pKa = 7.45LQPGAPADD96 pKa = 3.49GANYY100 pKa = 9.92VRR102 pKa = 11.84FRR104 pKa = 11.84NNIRR108 pKa = 11.84DD109 pKa = 3.78QVIVPPAEE117 pKa = 4.9DD118 pKa = 3.48SLTTIEE124 pKa = 4.09PAAPRR129 pKa = 11.84NLEE132 pKa = 3.79ADD134 pKa = 4.0RR135 pKa = 11.84QAMLQRR141 pKa = 11.84YY142 pKa = 8.11NLAMLQRR149 pKa = 11.84TLNEE153 pKa = 3.77EE154 pKa = 3.89LDD156 pKa = 3.4ALRR159 pKa = 11.84AQRR162 pKa = 11.84AAAAEE167 pKa = 4.14APPVVEE173 pKa = 5.01DD174 pKa = 4.03TPEE177 pKa = 4.22GQSS180 pKa = 3.1

Molecular weight: 20.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7S8|A0A4P8W7S8_9VIRU Uncharacterized protein OS=Tortoise microvirus 81 OX=2583189 PE=4 SV=1
MM1 pKa = 7.91RR2 pKa = 11.84RR3 pKa = 11.84RR4 pKa = 11.84TYY6 pKa = 11.03PMARR10 pKa = 11.84KK11 pKa = 9.45GKK13 pKa = 10.03RR14 pKa = 11.84NRR16 pKa = 11.84TQKK19 pKa = 7.28TTVRR23 pKa = 11.84AGGQTLTATVVRR35 pKa = 11.84ATPEE39 pKa = 3.55PMKK42 pKa = 10.2PRR44 pKa = 11.84RR45 pKa = 11.84SLTLARR51 pKa = 11.84DD52 pKa = 3.58RR53 pKa = 11.84DD54 pKa = 4.05AGAHH58 pKa = 4.69VPRR61 pKa = 11.84TISPAPFAVPAVATRR76 pKa = 11.84TTRR79 pKa = 11.84DD80 pKa = 2.74IQAQQKK86 pKa = 9.68AVKK89 pKa = 9.42QRR91 pKa = 11.84RR92 pKa = 11.84AAQNTQQDD100 pKa = 3.92NPSSKK105 pKa = 9.31RR106 pKa = 11.84TRR108 pKa = 11.84GVCKK112 pKa = 9.55PQPDD116 pKa = 3.8PAKK119 pKa = 10.25APRR122 pKa = 11.84GGGGSRR128 pKa = 11.84PFVPWCLL135 pKa = 3.44

Molecular weight: 14.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1833

74

539

229.1

25.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.274 ± 0.894

0.927 ± 0.428

5.292 ± 0.624

6.219 ± 0.563

4.255 ± 0.443

8.238 ± 1.421

2.019 ± 0.277

4.474 ± 0.428

4.801 ± 0.56

7.256 ± 0.9

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.346 ± 0.233

4.146 ± 0.595

6.11 ± 0.64

3.71 ± 0.463

7.911 ± 0.855

5.237 ± 0.858

6.274 ± 0.618

6.765 ± 0.691

1.582 ± 0.324

3.164 ± 0.715
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski