Simian torque teno virus 32

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus; Torque teno chlorocebus virus 5

Average proteome isoelectric point is 8.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5IMV7|A0A0C5IMV7_9VIRU ORF2 OS=Simian torque teno virus 32 OX=1619220 PE=4 SV=1
MM1 pKa = 7.24FSFRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84VHH11 pKa = 4.89GQTRR15 pKa = 11.84QRR17 pKa = 11.84PSLLSMFWKK26 pKa = 10.5KK27 pKa = 10.21SAEE30 pKa = 3.98DD31 pKa = 3.11AGAWEE36 pKa = 4.35EE37 pKa = 3.72RR38 pKa = 11.84WLRR41 pKa = 11.84SVYY44 pKa = 9.01DD45 pKa = 3.42THH47 pKa = 9.47ALFCSCNYY55 pKa = 10.19FLGHH59 pKa = 7.1LSAIQARR66 pKa = 11.84HH67 pKa = 6.01RR68 pKa = 11.84GPRR71 pKa = 11.84GQSRR75 pKa = 11.84TPPTLDD81 pKa = 3.01GLGPPSPPRR90 pKa = 11.84LAAPPPTPASSRR102 pKa = 11.84ASTTPISLLHH112 pKa = 6.37SGGSSSSSGVHH123 pKa = 6.13TDD125 pKa = 3.82SPWSTGGDD133 pKa = 3.34GDD135 pKa = 4.09AGGPGGDD142 pKa = 3.64GAGQDD147 pKa = 3.64GVDD150 pKa = 3.73AFTAEE155 pKa = 3.99QLEE158 pKa = 4.32EE159 pKa = 3.91LFAAVEE165 pKa = 3.87EE166 pKa = 4.53DD167 pKa = 3.49ARR169 pKa = 4.84

Molecular weight: 18.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5IBK5|A0A0C5IBK5_9VIRU Capsid protein OS=Simian torque teno virus 32 OX=1619220 PE=3 SV=1
MM1 pKa = 7.62EE2 pKa = 5.44DD3 pKa = 3.52ARR5 pKa = 11.84RR6 pKa = 11.84ASPPLCKK13 pKa = 10.02KK14 pKa = 10.25KK15 pKa = 10.74LVFLGHH21 pKa = 6.7GRR23 pKa = 11.84GQPPAGVATEE33 pKa = 4.56KK34 pKa = 9.75KK35 pKa = 7.74TQNAEE40 pKa = 3.78QRR42 pKa = 11.84GGPGVPGPPPAARR55 pKa = 11.84AAAGAVPPRR64 pKa = 11.84PTPATATAPKK74 pKa = 8.61KK75 pKa = 8.52TPKK78 pKa = 10.15SPRR81 pKa = 11.84RR82 pKa = 11.84DD83 pKa = 3.29LAEE86 pKa = 4.55AGPNRR91 pKa = 11.84GPPTARR97 pKa = 11.84PPAIVIHH104 pKa = 6.57RR105 pKa = 11.84GSHH108 pKa = 4.28TVSMFHH114 pKa = 7.12EE115 pKa = 4.85NPQVSYY121 pKa = 11.46NNQRR125 pKa = 11.84EE126 pKa = 4.33YY127 pKa = 11.49NQFEE131 pKa = 4.96LDD133 pKa = 3.67TEE135 pKa = 4.43RR136 pKa = 11.84EE137 pKa = 3.85LAQAFMRR144 pKa = 11.84YY145 pKa = 8.87PRR147 pKa = 11.84IRR149 pKa = 11.84PRR151 pKa = 11.84PYY153 pKa = 9.72EE154 pKa = 3.8VPYY157 pKa = 10.04YY158 pKa = 8.28PWVYY162 pKa = 10.21HH163 pKa = 5.58SVSTRR168 pKa = 11.84TEE170 pKa = 3.92FPKK173 pKa = 10.77VSFALRR179 pKa = 11.84FNPFSINN186 pKa = 3.09

Molecular weight: 20.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1265

148

762

316.3

36.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.929 ± 2.112

1.344 ± 0.306

3.399 ± 0.675

4.822 ± 0.318

3.241 ± 0.551

7.115 ± 1.016

2.53 ± 0.378

2.925 ± 0.764

4.664 ± 0.76

7.352 ± 1.425

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.66 ± 0.157

3.794 ± 0.806

8.933 ± 1.85

5.138 ± 0.582

11.067 ± 0.677

8.458 ± 3.089

6.877 ± 0.389

4.032 ± 0.801

2.925 ± 0.998

3.794 ± 1.084
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski