Moraxella cuniculi DSM 21768

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella cuniculi

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2140 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1N7FHV4|A0A1N7FHV4_9GAMM Benzoate 1 2-dioxygenase alpha subunit OS=Moraxella cuniculi DSM 21768 OX=1122245 GN=SAMN02745664_11317 PE=4 SV=1
MM1 pKa = 7.4LPVASSVAFVSFPVVISDD19 pKa = 3.96AVVSNHH25 pKa = 7.12DD26 pKa = 3.87GLYY29 pKa = 10.48LWWEE33 pKa = 4.37LFNLMDD39 pKa = 4.89YY40 pKa = 11.7GDD42 pKa = 4.1FCDD45 pKa = 5.97LVDD48 pKa = 5.74LYY50 pKa = 11.82VDD52 pKa = 4.32LDD54 pKa = 4.38EE55 pKa = 5.62IPAFISTVVNLSNDD69 pKa = 3.73KK70 pKa = 10.85IEE72 pKa = 5.47LIHH75 pKa = 6.71QGGVNIRR82 pKa = 11.84QFIINTQQ89 pKa = 3.01

Molecular weight: 10.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1N7DWQ6|A0A1N7DWQ6_9GAMM Protein GrpE OS=Moraxella cuniculi DSM 21768 OX=1122245 GN=grpE PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.49RR12 pKa = 11.84KK13 pKa = 7.97RR14 pKa = 11.84THH16 pKa = 5.89GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.32KK26 pKa = 10.31GRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.03GRR39 pKa = 11.84HH40 pKa = 5.34RR41 pKa = 11.84LTVV44 pKa = 3.07

Molecular weight: 5.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2140

0

2140

657084

30

2040

307.0

33.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.743 ± 0.062

0.988 ± 0.02

5.775 ± 0.041

5.033 ± 0.05

3.898 ± 0.042

6.795 ± 0.055

2.277 ± 0.033

6.743 ± 0.041

5.447 ± 0.046

10.277 ± 0.072

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.525 ± 0.027

4.592 ± 0.054

3.786 ± 0.029

5.01 ± 0.043

4.406 ± 0.036

5.978 ± 0.042

5.77 ± 0.046

6.615 ± 0.054

1.145 ± 0.022

3.196 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski