Brown greater galago prosimian foamy virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Prosimiispumavirus

Average proteome isoelectric point is 6.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A088FA16|A0A088FA16_9RETR Bel1 protein OS=Brown greater galago prosimian foamy virus OX=2170139 GN=bel1 PE=4 SV=1
MM1 pKa = 7.52ASWNPGQKK9 pKa = 10.27GINIPQNDD17 pKa = 4.32EE18 pKa = 3.87SDD20 pKa = 3.86LPQPRR25 pKa = 11.84PLPALPASEE34 pKa = 5.13FMDD37 pKa = 3.58HH38 pKa = 6.77NYY40 pKa = 10.52VGMRR44 pKa = 11.84QWYY47 pKa = 8.32NDD49 pKa = 3.56PSGGYY54 pKa = 8.49PDD56 pKa = 4.9LGNEE60 pKa = 4.12EE61 pKa = 4.16LHH63 pKa = 7.43DD64 pKa = 3.98VLFSLAYY71 pKa = 10.16NCLHH75 pKa = 7.16FYY77 pKa = 10.7KK78 pKa = 10.26SLPIVRR84 pKa = 11.84QRR86 pKa = 11.84FKK88 pKa = 11.1CYY90 pKa = 10.32LEE92 pKa = 4.56PSFQRR97 pKa = 11.84VGIYY101 pKa = 9.58NICFQCKK108 pKa = 6.91QCYY111 pKa = 8.9KK112 pKa = 10.83VIIEE116 pKa = 4.45SKK118 pKa = 8.72PVKK121 pKa = 10.15YY122 pKa = 10.52DD123 pKa = 3.4PEE125 pKa = 4.51VKK127 pKa = 10.39FFTLLLSNFQKK138 pKa = 10.87SSWRR142 pKa = 11.84RR143 pKa = 11.84SRR145 pKa = 11.84MCRR148 pKa = 11.84HH149 pKa = 6.36LEE151 pKa = 3.6WHH153 pKa = 6.47EE154 pKa = 4.01NEE156 pKa = 3.99QFSYY160 pKa = 10.86RR161 pKa = 11.84STRR164 pKa = 11.84PRR166 pKa = 11.84EE167 pKa = 4.12QGSEE171 pKa = 4.06PSPAATSSCSRR182 pKa = 11.84MDD184 pKa = 3.71SVPDD188 pKa = 3.76PPRR191 pKa = 11.84GPRR194 pKa = 11.84EE195 pKa = 4.06CLQGPSMSDD204 pKa = 3.3CASPIPGPCTSQEE217 pKa = 3.84PYY219 pKa = 11.19ADD221 pKa = 2.66VDD223 pKa = 3.73AFLEE227 pKa = 4.46GLLQQPQKK235 pKa = 11.0GRR237 pKa = 11.84ADD239 pKa = 3.21SGMGLDD245 pKa = 5.1PGAGWTEE252 pKa = 3.74DD253 pKa = 3.49LEE255 pKa = 4.86RR256 pKa = 11.84FILGDD261 pKa = 3.96DD262 pKa = 3.81NSCARR267 pKa = 11.84DD268 pKa = 3.42WTDD271 pKa = 4.09SMHH274 pKa = 7.16SDD276 pKa = 3.18SS277 pKa = 5.1

Molecular weight: 31.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A088FA16|A0A088FA16_9RETR Bel1 protein OS=Brown greater galago prosimian foamy virus OX=2170139 GN=bel1 PE=4 SV=1
MM1 pKa = 7.12SQPSASGSAGAGGAPQQPPPPPPQPGPAAPVPRR34 pKa = 11.84AQIGYY39 pKa = 10.23GDD41 pKa = 5.11LDD43 pKa = 3.66VLLLQQEE50 pKa = 4.39YY51 pKa = 11.06HH52 pKa = 7.03LIDD55 pKa = 4.68PNLQVQHH62 pKa = 7.28LDD64 pKa = 3.29TLLVRR69 pKa = 11.84ITGGNWGPGDD79 pKa = 3.39RR80 pKa = 11.84FARR83 pKa = 11.84IEE85 pKa = 3.99VLLRR89 pKa = 11.84DD90 pKa = 3.85TLGPLQQPRR99 pKa = 11.84YY100 pKa = 9.27RR101 pKa = 11.84YY102 pKa = 10.11AAMQQADD109 pKa = 4.2LRR111 pKa = 11.84NDD113 pKa = 3.73IILHH117 pKa = 6.43LNYY120 pKa = 9.76QDD122 pKa = 4.81AIIIFDD128 pKa = 3.99MIIPSEE134 pKa = 4.19GVHH137 pKa = 5.14RR138 pKa = 11.84HH139 pKa = 4.91GPMFDD144 pKa = 3.68GLWIHH149 pKa = 7.07GDD151 pKa = 3.62DD152 pKa = 3.83YY153 pKa = 12.04SMNFQPITAHH163 pKa = 6.32EE164 pKa = 4.99LYY166 pKa = 10.82LLPQQVLTEE175 pKa = 4.08EE176 pKa = 4.54VEE178 pKa = 4.71LLTEE182 pKa = 4.1VCNRR186 pKa = 11.84MADD189 pKa = 3.75WIRR192 pKa = 11.84RR193 pKa = 11.84HH194 pKa = 5.65RR195 pKa = 11.84CGGGSGSSQPPPPPPPAVPVLPSAPPASSLPLPPQGWGISPPVATSTPGAAGHH248 pKa = 6.27SSSAGPNISLGGTYY262 pKa = 9.93VPPPVAPPAPVIGGPGGPGQLPAMVQVLPAQPVVIPINVIRR303 pKa = 11.84SVCGDD308 pKa = 3.68TPSNPQDD315 pKa = 3.03IPLWMGRR322 pKa = 11.84IIPAIEE328 pKa = 4.16GVFPIDD334 pKa = 3.81NPNLRR339 pKa = 11.84MRR341 pKa = 11.84VVNALLALHH350 pKa = 7.04PGLAITEE357 pKa = 4.57LNAQTWGQVLAVLHH371 pKa = 5.69MRR373 pKa = 11.84ALGHH377 pKa = 5.99TALHH381 pKa = 5.63QLPALLEE388 pKa = 4.56TIVKK392 pKa = 9.24TDD394 pKa = 4.56GILPAYY400 pKa = 9.49NMGMEE405 pKa = 4.49VTQQDD410 pKa = 3.94FSYY413 pKa = 10.79VWGILRR419 pKa = 11.84TLLPGQAFVLSMQNEE434 pKa = 4.76LDD436 pKa = 3.81RR437 pKa = 11.84LPAAQRR443 pKa = 11.84PGMFPGLLQRR453 pKa = 11.84TLDD456 pKa = 3.58ILGLNSRR463 pKa = 11.84GQNIQKK469 pKa = 9.26TNTQQQAPKK478 pKa = 9.87RR479 pKa = 11.84GQKK482 pKa = 9.44PKK484 pKa = 9.98PRR486 pKa = 11.84LPPVHH491 pKa = 6.87RR492 pKa = 11.84RR493 pKa = 11.84PAPFTPPATPSPRR506 pKa = 11.84QQASASPSSQGDD518 pKa = 3.28NRR520 pKa = 11.84SPQPQGRR527 pKa = 11.84GTYY530 pKa = 9.67GPSRR534 pKa = 11.84GGGSGPRR541 pKa = 11.84YY542 pKa = 9.0NFRR545 pKa = 11.84PRR547 pKa = 11.84VQPPDD552 pKa = 3.03RR553 pKa = 11.84YY554 pKa = 10.92GFGRR558 pKa = 11.84GQGGRR563 pKa = 11.84SSIGAQDD570 pKa = 3.58NQQPGQGGQRR580 pKa = 11.84TQQTNQNRR588 pKa = 11.84NQGNATGGRR597 pKa = 11.84TQPQNRR603 pKa = 11.84TVNTVRR609 pKa = 11.84VTQTNPQGGSSVSNPAVTTSQNTGTGSATQSSSSS643 pKa = 3.26

Molecular weight: 68.55 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2381

277

999

595.3

66.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.628 ± 0.564

2.1 ± 0.558

4.872 ± 0.507

4.914 ± 0.996

2.898 ± 0.426

6.846 ± 1.475

2.604 ± 0.231

5.25 ± 0.857

3.276 ± 1.006

9.534 ± 0.977

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.52 ± 0.127

4.326 ± 0.308

9.408 ± 2.067

6.216 ± 1.071

5.712 ± 0.465

7.224 ± 0.758

5.922 ± 0.936

5.502 ± 0.44

2.058 ± 0.397

3.192 ± 0.488
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski