Tessaracoccus lapidicaptus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Tessaracoccus

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2736 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1C0ARM4|A0A1C0ARM4_9ACTN HTH-type transcriptional regulator LutR OS=Tessaracoccus lapidicaptus OX=1427523 GN=lutR_4 PE=4 SV=1
MM1 pKa = 7.27ATFNFRR7 pKa = 11.84KK8 pKa = 10.26AGTALAAVTALSLTLTACGGEE29 pKa = 4.28SEE31 pKa = 4.4PAATNGGDD39 pKa = 3.64GEE41 pKa = 4.65AVDD44 pKa = 4.31TSAASGQIDD53 pKa = 3.7YY54 pKa = 9.89WLWDD58 pKa = 3.8NNQKK62 pKa = 9.77PAYY65 pKa = 6.68EE66 pKa = 3.74QCAADD71 pKa = 3.95FQEE74 pKa = 4.31EE75 pKa = 4.54TGVSVTITQYY85 pKa = 11.61AWDD88 pKa = 5.31DD89 pKa = 3.56YY90 pKa = 11.41WSGITNGFVAGTAPDD105 pKa = 3.41VFTNHH110 pKa = 6.82LSRR113 pKa = 11.84YY114 pKa = 8.95PEE116 pKa = 4.31FVTQGQLMALDD127 pKa = 4.07ATLEE131 pKa = 4.16ADD133 pKa = 3.64GVDD136 pKa = 2.95VDD138 pKa = 5.41GYY140 pKa = 10.91QEE142 pKa = 4.08GLADD146 pKa = 4.03LWVGQDD152 pKa = 3.31GLRR155 pKa = 11.84YY156 pKa = 9.62GLPKK160 pKa = 10.94DD161 pKa = 3.74FDD163 pKa = 4.16TVAIFYY169 pKa = 10.44NKK171 pKa = 10.44ALIEE175 pKa = 4.02EE176 pKa = 4.59AGVDD180 pKa = 3.93EE181 pKa = 5.53ADD183 pKa = 4.3LAALEE188 pKa = 4.45WNPEE192 pKa = 3.9DD193 pKa = 3.68GGTYY197 pKa = 10.59EE198 pKa = 5.14EE199 pKa = 5.09MIAHH203 pKa = 6.3LTIDD207 pKa = 3.76NNGVRR212 pKa = 11.84GDD214 pKa = 3.62EE215 pKa = 4.19PGFDD219 pKa = 3.36KK220 pKa = 11.15TKK222 pKa = 9.65VAVYY226 pKa = 10.65GLGLDD231 pKa = 3.96GGSGGGNGQTQWSMYY246 pKa = 10.39SGTTGWTVTDD256 pKa = 3.85KK257 pKa = 11.44NPWGTKK263 pKa = 8.62YY264 pKa = 10.87NYY266 pKa = 10.04DD267 pKa = 3.35AAEE270 pKa = 4.31FKK272 pKa = 10.43DD273 pKa = 4.06TISWMASLAEE283 pKa = 4.25KK284 pKa = 10.67GYY286 pKa = 8.86MPTVEE291 pKa = 4.74AVTGQSSGDD300 pKa = 3.03IFGAGKK306 pKa = 10.33YY307 pKa = 11.05AMITNGSWMINQMFGYY323 pKa = 8.87TGIEE327 pKa = 3.98TGLAPTPVGPSGEE340 pKa = 4.08RR341 pKa = 11.84ASMYY345 pKa = 10.68NGLADD350 pKa = 4.14SVWAGSDD357 pKa = 3.04NKK359 pKa = 10.48AAAVKK364 pKa = 8.48WVEE367 pKa = 4.08YY368 pKa = 10.1LGSAACQDD376 pKa = 3.52IVGEE380 pKa = 4.13AGVVFPAIPSATEE393 pKa = 3.39KK394 pKa = 10.79AQAAFADD401 pKa = 3.92RR402 pKa = 11.84GIDD405 pKa = 3.46VEE407 pKa = 4.28PFLVHH412 pKa = 6.36VNEE415 pKa = 4.25GTTFLFPITDD425 pKa = 3.58YY426 pKa = 11.42ASQINGIMQPAVDD439 pKa = 4.79AVFTGQADD447 pKa = 3.85VDD449 pKa = 4.26SLDD452 pKa = 3.74AANEE456 pKa = 3.97QVNALFNGG464 pKa = 3.79

Molecular weight: 49.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1C0AR08|A0A1C0AR08_9ACTN Tyrosine recombinase XerD OS=Tessaracoccus lapidicaptus OX=1427523 GN=xerD PE=3 SV=1
MM1 pKa = 7.49RR2 pKa = 11.84AAPARR7 pKa = 11.84AEE9 pKa = 4.3TIDD12 pKa = 3.31GRR14 pKa = 11.84GAMMTVAVRR23 pKa = 11.84VRR25 pKa = 11.84RR26 pKa = 11.84VSVARR31 pKa = 11.84GVTGTIAVAPARR43 pKa = 11.84AVMMTVVVRR52 pKa = 11.84VRR54 pKa = 11.84RR55 pKa = 11.84VSVARR60 pKa = 11.84GATAMTIVVPVRR72 pKa = 11.84VVMMTVVVRR81 pKa = 11.84VRR83 pKa = 11.84RR84 pKa = 11.84VSVARR89 pKa = 11.84GATAMTIVAPVRR101 pKa = 11.84AVMMTVVVRR110 pKa = 11.84VRR112 pKa = 11.84RR113 pKa = 11.84VSVARR118 pKa = 11.84GASVTTTVAPALVRR132 pKa = 11.84RR133 pKa = 11.84VSVARR138 pKa = 11.84GVTGTTTVAPALVRR152 pKa = 11.84RR153 pKa = 11.84VSVARR158 pKa = 11.84GASVTTAVAPARR170 pKa = 11.84VRR172 pKa = 11.84TASVARR178 pKa = 11.84GATATIAVVPAPVVMMTGVVRR199 pKa = 11.84VRR201 pKa = 11.84RR202 pKa = 11.84VSVVRR207 pKa = 11.84GVTATIAVDD216 pKa = 3.7LVPAVMMTGVVRR228 pKa = 11.84VRR230 pKa = 11.84RR231 pKa = 11.84VSVVRR236 pKa = 11.84GVTATIAVDD245 pKa = 3.7LVPAVMMTGVARR257 pKa = 11.84VRR259 pKa = 11.84RR260 pKa = 11.84ASVVRR265 pKa = 11.84GVTATTTVDD274 pKa = 3.72LVPAVTMTAEE284 pKa = 3.78ARR286 pKa = 11.84AATMTGAVRR295 pKa = 11.84VRR297 pKa = 11.84RR298 pKa = 11.84VSVAPGATATTTVAPARR315 pKa = 11.84VATTTAEE322 pKa = 3.98ARR324 pKa = 11.84AGTTGVRR331 pKa = 11.84APRR334 pKa = 11.84NSPTSRR340 pKa = 11.84IPAPPPARR348 pKa = 11.84TSPTCRR354 pKa = 11.84RR355 pKa = 11.84TSSSPSSRR363 pKa = 11.84RR364 pKa = 11.84AA365 pKa = 3.01

Molecular weight: 37.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2736

0

2736

921061

37

2146

336.6

36.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.323 ± 0.068

0.653 ± 0.014

6.385 ± 0.036

5.694 ± 0.043

2.949 ± 0.027

8.98 ± 0.04

2.172 ± 0.024

4.056 ± 0.031

1.946 ± 0.031

10.346 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.062 ± 0.021

1.89 ± 0.026

5.48 ± 0.033

2.774 ± 0.026

7.495 ± 0.057

5.111 ± 0.026

5.985 ± 0.036

9.141 ± 0.044

1.547 ± 0.019

2.01 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski