Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_163

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.894AlaAla: 3.894 ± 1.71
0.649AlaCys: 0.649 ± 1.107
1.947AlaAsp: 1.947 ± 0.985
5.191AlaGlu: 5.191 ± 2.931
6.489AlaPhe: 6.489 ± 1.744
4.543AlaGly: 4.543 ± 2.078
0.0AlaHis: 0.0 ± 0.0
2.596AlaIle: 2.596 ± 0.622
4.543AlaLys: 4.543 ± 1.95
9.734AlaLeu: 9.734 ± 4.144
0.0AlaMet: 0.0 ± 0.0
3.894AlaAsn: 3.894 ± 1.595
2.596AlaPro: 2.596 ± 0.918
5.84AlaGln: 5.84 ± 2.53
9.085AlaArg: 9.085 ± 3.526
6.489AlaSer: 6.489 ± 2.835
3.894AlaThr: 3.894 ± 0.904
4.543AlaVal: 4.543 ± 2.224
0.649AlaTrp: 0.649 ± 0.539
3.894AlaTyr: 3.894 ± 1.023
0.0AlaXaa: 0.0 ± 0.0
Cys
1.298CysAla: 1.298 ± 1.233
0.649CysCys: 0.649 ± 0.572
1.298CysAsp: 1.298 ± 0.76
1.947CysGlu: 1.947 ± 1.479
0.649CysPhe: 0.649 ± 0.572
0.649CysGly: 0.649 ± 0.572
0.0CysHis: 0.0 ± 0.0
1.298CysIle: 1.298 ± 0.847
0.0CysLys: 0.0 ± 0.0
1.947CysLeu: 1.947 ± 1.075
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
1.947CysPro: 1.947 ± 0.804
0.649CysGln: 0.649 ± 0.539
2.596CysArg: 2.596 ± 1.078
1.947CysSer: 1.947 ± 1.115
0.649CysThr: 0.649 ± 0.572
1.298CysVal: 1.298 ± 1.233
0.0CysTrp: 0.0 ± 0.0
1.298CysTyr: 1.298 ± 0.556
0.0CysXaa: 0.0 ± 0.0
Asp
8.436AspAla: 8.436 ± 1.041
1.298AspCys: 1.298 ± 0.76
5.84AspAsp: 5.84 ± 1.544
3.245AspGlu: 3.245 ± 1.198
5.191AspPhe: 5.191 ± 1.431
3.894AspGly: 3.894 ± 1.634
2.596AspHis: 2.596 ± 1.113
1.947AspIle: 1.947 ± 1.099
1.298AspLys: 1.298 ± 0.76
1.947AspLeu: 1.947 ± 1.265
0.649AspMet: 0.649 ± 0.572
3.245AspAsn: 3.245 ± 0.894
1.947AspPro: 1.947 ± 1.238
1.298AspGln: 1.298 ± 0.843
2.596AspArg: 2.596 ± 1.078
1.947AspSer: 1.947 ± 0.794
4.543AspThr: 4.543 ± 1.798
3.245AspVal: 3.245 ± 1.005
0.649AspTrp: 0.649 ± 0.422
4.543AspTyr: 4.543 ± 1.798
0.0AspXaa: 0.0 ± 0.0
Glu
5.84GluAla: 5.84 ± 1.769
3.245GluCys: 3.245 ± 1.313
2.596GluAsp: 2.596 ± 1.113
1.298GluGlu: 1.298 ± 0.93
0.649GluPhe: 0.649 ± 0.539
2.596GluGly: 2.596 ± 1.189
2.596GluHis: 2.596 ± 1.331
4.543GluIle: 4.543 ± 2.338
1.298GluLys: 1.298 ± 0.663
2.596GluLeu: 2.596 ± 1.173
0.0GluMet: 0.0 ± 0.0
3.894GluAsn: 3.894 ± 1.27
0.0GluPro: 0.0 ± 0.0
1.947GluGln: 1.947 ± 0.837
2.596GluArg: 2.596 ± 1.173
2.596GluSer: 2.596 ± 1.113
1.298GluThr: 1.298 ± 0.843
3.245GluVal: 3.245 ± 0.928
0.649GluTrp: 0.649 ± 0.539
6.489GluTyr: 6.489 ± 2.284
0.0GluXaa: 0.0 ± 0.0
Phe
2.596PheAla: 2.596 ± 1.185
1.298PheCys: 1.298 ± 1.215
5.84PheAsp: 5.84 ± 1.455
2.596PheGlu: 2.596 ± 1.157
2.596PhePhe: 2.596 ± 0.85
5.191PheGly: 5.191 ± 0.923
0.649PheHis: 0.649 ± 0.539
1.298PheIle: 1.298 ± 0.556
1.947PheLys: 1.947 ± 0.837
1.947PheLeu: 1.947 ± 1.075
0.0PheMet: 0.0 ± 0.0
1.298PheAsn: 1.298 ± 0.76
1.947PhePro: 1.947 ± 1.479
2.596PheGln: 2.596 ± 1.722
1.298PheArg: 1.298 ± 0.556
5.84PheSer: 5.84 ± 2.205
3.245PheThr: 3.245 ± 1.545
2.596PheVal: 2.596 ± 1.07
0.649PheTrp: 0.649 ± 0.422
0.649PheTyr: 0.649 ± 0.747
0.0PheXaa: 0.0 ± 0.0
Gly
5.84GlyAla: 5.84 ± 2.74
1.298GlyCys: 1.298 ± 1.028
5.191GlyAsp: 5.191 ± 2.12
5.84GlyGlu: 5.84 ± 2.053
3.245GlyPhe: 3.245 ± 0.894
5.191GlyGly: 5.191 ± 1.852
0.649GlyHis: 0.649 ± 1.107
4.543GlyIle: 4.543 ± 2.125
3.894GlyLys: 3.894 ± 1.325
6.489GlyLeu: 6.489 ± 2.986
1.298GlyMet: 1.298 ± 1.079
3.894GlyAsn: 3.894 ± 1.528
0.0GlyPro: 0.0 ± 0.0
2.596GlyGln: 2.596 ± 1.796
4.543GlyArg: 4.543 ± 2.092
7.138GlySer: 7.138 ± 2.049
1.947GlyThr: 1.947 ± 1.265
7.787GlyVal: 7.787 ± 2.385
1.298GlyTrp: 1.298 ± 0.663
3.894GlyTyr: 3.894 ± 1.015
0.0GlyXaa: 0.0 ± 0.0
His
0.649HisAla: 0.649 ± 1.107
0.0HisCys: 0.0 ± 0.0
0.649HisAsp: 0.649 ± 0.422
0.649HisGlu: 0.649 ± 0.572
1.298HisPhe: 1.298 ± 0.556
1.947HisGly: 1.947 ± 0.794
0.649HisHis: 0.649 ± 0.572
0.649HisIle: 0.649 ± 1.192
0.0HisLys: 0.0 ± 0.0
5.191HisLeu: 5.191 ± 3.187
0.0HisMet: 0.0 ± 0.0
1.298HisAsn: 1.298 ± 2.215
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.649HisArg: 0.649 ± 0.572
1.298HisSer: 1.298 ± 1.215
0.0HisThr: 0.0 ± 0.0
0.649HisVal: 0.649 ± 0.422
0.649HisTrp: 0.649 ± 0.422
1.298HisTyr: 1.298 ± 1.233
0.0HisXaa: 0.0 ± 0.0
Ile
3.245IleAla: 3.245 ± 2.153
0.649IleCys: 0.649 ± 0.422
4.543IleAsp: 4.543 ± 0.991
3.245IleGlu: 3.245 ± 0.928
1.298IlePhe: 1.298 ± 1.233
5.191IleGly: 5.191 ± 1.969
0.0IleHis: 0.0 ± 0.0
4.543IleIle: 4.543 ± 1.259
0.649IleLys: 0.649 ± 0.539
1.947IleLeu: 1.947 ± 1.115
3.245IleMet: 3.245 ± 1.778
3.894IleAsn: 3.894 ± 1.077
2.596IlePro: 2.596 ± 1.157
2.596IleGln: 2.596 ± 0.943
1.298IleArg: 1.298 ± 0.76
3.894IleSer: 3.894 ± 2.118
3.894IleThr: 3.894 ± 1.203
0.0IleVal: 0.0 ± 0.0
1.298IleTrp: 1.298 ± 0.843
1.298IleTyr: 1.298 ± 1.181
0.0IleXaa: 0.0 ± 0.0
Lys
2.596LysAla: 2.596 ± 1.496
1.298LysCys: 1.298 ± 0.556
3.245LysAsp: 3.245 ± 0.692
1.298LysGlu: 1.298 ± 0.532
0.649LysPhe: 0.649 ± 0.422
2.596LysGly: 2.596 ± 1.155
1.298LysHis: 1.298 ± 1.215
0.649LysIle: 0.649 ± 0.422
5.84LysLys: 5.84 ± 2.809
1.298LysLeu: 1.298 ± 0.93
2.596LysMet: 2.596 ± 1.157
1.947LysAsn: 1.947 ± 0.92
1.298LysPro: 1.298 ± 0.843
1.947LysGln: 1.947 ± 1.064
2.596LysArg: 2.596 ± 0.622
5.191LysSer: 5.191 ± 1.939
1.298LysThr: 1.298 ± 0.843
1.298LysVal: 1.298 ± 1.079
1.298LysTrp: 1.298 ± 1.2
2.596LysTyr: 2.596 ± 0.918
0.0LysXaa: 0.0 ± 0.0
Leu
7.787LeuAla: 7.787 ± 2.222
1.298LeuCys: 1.298 ± 0.556
5.84LeuAsp: 5.84 ± 1.515
3.245LeuGlu: 3.245 ± 1.118
4.543LeuPhe: 4.543 ± 1.541
7.787LeuGly: 7.787 ± 2.2
0.0LeuHis: 0.0 ± 0.0
5.84LeuIle: 5.84 ± 0.94
2.596LeuLys: 2.596 ± 0.696
3.894LeuLeu: 3.894 ± 1.8
1.947LeuMet: 1.947 ± 1.048
3.894LeuAsn: 3.894 ± 1.951
4.543LeuPro: 4.543 ± 0.963
3.245LeuGln: 3.245 ± 1.546
5.191LeuArg: 5.191 ± 1.798
8.436LeuSer: 8.436 ± 2.007
3.894LeuThr: 3.894 ± 1.023
3.894LeuVal: 3.894 ± 1.361
0.649LeuTrp: 0.649 ± 0.422
0.649LeuTyr: 0.649 ± 1.192
0.0LeuXaa: 0.0 ± 0.0
Met
1.947MetAla: 1.947 ± 0.985
0.649MetCys: 0.649 ± 0.572
3.245MetAsp: 3.245 ± 1.221
0.649MetGlu: 0.649 ± 0.572
0.0MetPhe: 0.0 ± 0.0
0.649MetGly: 0.649 ± 0.422
0.649MetHis: 0.649 ± 0.572
0.0MetIle: 0.0 ± 0.0
1.947MetLys: 1.947 ± 1.121
1.947MetLeu: 1.947 ± 0.794
0.649MetMet: 0.649 ± 0.422
1.298MetAsn: 1.298 ± 1.079
0.649MetPro: 0.649 ± 0.747
0.0MetGln: 0.0 ± 0.0
2.596MetArg: 2.596 ± 1.07
2.596MetSer: 2.596 ± 0.696
0.649MetThr: 0.649 ± 0.747
0.649MetVal: 0.649 ± 0.747
0.649MetTrp: 0.649 ± 0.422
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.947AsnAla: 1.947 ± 1.265
0.649AsnCys: 0.649 ± 0.572
0.649AsnAsp: 0.649 ± 0.747
1.947AsnGlu: 1.947 ± 0.485
1.947AsnPhe: 1.947 ± 0.794
5.84AsnGly: 5.84 ± 1.651
0.0AsnHis: 0.0 ± 0.0
3.245AsnIle: 3.245 ± 1.995
1.947AsnLys: 1.947 ± 0.837
5.191AsnLeu: 5.191 ± 1.887
0.0AsnMet: 0.0 ± 0.502
2.596AsnAsn: 2.596 ± 0.943
4.543AsnPro: 4.543 ± 1.005
0.649AsnGln: 0.649 ± 0.539
3.245AsnArg: 3.245 ± 1.074
3.894AsnSer: 3.894 ± 1.308
2.596AsnThr: 2.596 ± 1.064
4.543AsnVal: 4.543 ± 2.361
1.298AsnTrp: 1.298 ± 0.847
1.947AsnTyr: 1.947 ± 0.804
0.0AsnXaa: 0.0 ± 0.0
Pro
2.596ProAla: 2.596 ± 1.331
1.298ProCys: 1.298 ± 0.847
0.649ProAsp: 0.649 ± 0.422
0.649ProGlu: 0.649 ± 0.572
1.947ProPhe: 1.947 ± 1.314
2.596ProGly: 2.596 ± 1.064
1.298ProHis: 1.298 ± 1.233
0.649ProIle: 0.649 ± 0.422
0.0ProLys: 0.0 ± 0.0
1.947ProLeu: 1.947 ± 1.121
1.947ProMet: 1.947 ± 0.794
0.649ProAsn: 0.649 ± 0.422
3.245ProPro: 3.245 ± 2.187
4.543ProGln: 4.543 ± 2.452
2.596ProArg: 2.596 ± 1.381
6.489ProSer: 6.489 ± 3.423
3.894ProThr: 3.894 ± 1.608
3.894ProVal: 3.894 ± 1.857
1.947ProTrp: 1.947 ± 0.804
0.649ProTyr: 0.649 ± 0.572
0.0ProXaa: 0.0 ± 0.0
Gln
5.84GlnAla: 5.84 ± 3.049
0.649GlnCys: 0.649 ± 0.539
1.947GlnAsp: 1.947 ± 1.314
1.947GlnGlu: 1.947 ± 1.265
2.596GlnPhe: 2.596 ± 1.246
3.245GlnGly: 3.245 ± 1.198
1.298GlnHis: 1.298 ± 0.556
3.245GlnIle: 3.245 ± 0.945
1.298GlnLys: 1.298 ± 0.843
2.596GlnLeu: 2.596 ± 1.064
1.298GlnMet: 1.298 ± 0.76
1.298GlnAsn: 1.298 ± 0.532
0.649GlnPro: 0.649 ± 0.422
4.543GlnGln: 4.543 ± 2.478
3.894GlnArg: 3.894 ± 1.528
3.245GlnSer: 3.245 ± 2.022
2.596GlnThr: 2.596 ± 1.112
0.0GlnVal: 0.0 ± 0.0
0.649GlnTrp: 0.649 ± 0.572
2.596GlnTyr: 2.596 ± 1.247
0.0GlnXaa: 0.0 ± 0.0
Arg
5.84ArgAla: 5.84 ± 2.193
1.298ArgCys: 1.298 ± 0.556
4.543ArgAsp: 4.543 ± 1.182
1.947ArgGlu: 1.947 ± 1.148
3.245ArgPhe: 3.245 ± 2.307
3.245ArgGly: 3.245 ± 1.813
1.947ArgHis: 1.947 ± 1.075
4.543ArgIle: 4.543 ± 2.408
0.649ArgLys: 0.649 ± 0.539
7.787ArgLeu: 7.787 ± 2.099
1.947ArgMet: 1.947 ± 1.265
1.947ArgAsn: 1.947 ± 1.189
2.596ArgPro: 2.596 ± 1.067
1.298ArgGln: 1.298 ± 1.145
6.489ArgArg: 6.489 ± 2.902
8.436ArgSer: 8.436 ± 1.788
0.0ArgThr: 0.0 ± 0.0
3.245ArgVal: 3.245 ± 2.304
1.298ArgTrp: 1.298 ± 0.843
4.543ArgTyr: 4.543 ± 1.855
0.0ArgXaa: 0.0 ± 0.0
Ser
9.085SerAla: 9.085 ± 3.878
1.947SerCys: 1.947 ± 1.075
3.894SerAsp: 3.894 ± 1.457
6.489SerGlu: 6.489 ± 2.695
1.947SerPhe: 1.947 ± 1.274
8.436SerGly: 8.436 ± 2.272
1.947SerHis: 1.947 ± 1.115
3.894SerIle: 3.894 ± 1.276
3.245SerLys: 3.245 ± 0.945
6.489SerLeu: 6.489 ± 3.681
1.298SerMet: 1.298 ± 1.493
4.543SerAsn: 4.543 ± 1.533
6.489SerPro: 6.489 ± 2.754
5.191SerGln: 5.191 ± 1.117
4.543SerArg: 4.543 ± 0.717
7.138SerSer: 7.138 ± 2.722
3.894SerThr: 3.894 ± 0.91
5.84SerVal: 5.84 ± 1.548
0.649SerTrp: 0.649 ± 0.572
3.245SerTyr: 3.245 ± 1.688
0.0SerXaa: 0.0 ± 0.0
Thr
3.245ThrAla: 3.245 ± 0.842
0.0ThrCys: 0.0 ± 0.0
4.543ThrAsp: 4.543 ± 1.306
2.596ThrGlu: 2.596 ± 1.298
1.947ThrPhe: 1.947 ± 0.736
4.543ThrGly: 4.543 ± 2.022
0.0ThrHis: 0.0 ± 0.0
2.596ThrIle: 2.596 ± 1.113
3.245ThrLys: 3.245 ± 0.817
5.191ThrLeu: 5.191 ± 1.673
0.649ThrMet: 0.649 ± 0.67
1.298ThrAsn: 1.298 ± 0.93
1.947ThrPro: 1.947 ± 1.314
1.298ThrGln: 1.298 ± 0.76
1.947ThrArg: 1.947 ± 0.972
3.894ThrSer: 3.894 ± 1.951
1.947ThrThr: 1.947 ± 1.265
1.947ThrVal: 1.947 ± 0.804
0.649ThrTrp: 0.649 ± 0.539
1.947ThrTyr: 1.947 ± 1.047
0.0ThrXaa: 0.0 ± 0.0
Val
1.947ValAla: 1.947 ± 1.571
0.0ValCys: 0.0 ± 0.0
0.649ValAsp: 0.649 ± 0.422
3.245ValGlu: 3.245 ± 0.994
3.245ValPhe: 3.245 ± 1.545
3.894ValGly: 3.894 ± 1.244
0.0ValHis: 0.0 ± 0.0
1.947ValIle: 1.947 ± 0.837
5.191ValLys: 5.191 ± 1.153
5.84ValLeu: 5.84 ± 3.697
1.947ValMet: 1.947 ± 1.047
3.245ValAsn: 3.245 ± 1.37
5.191ValPro: 5.191 ± 2.235
1.947ValGln: 1.947 ± 0.804
5.191ValArg: 5.191 ± 2.336
4.543ValSer: 4.543 ± 2.108
2.596ValThr: 2.596 ± 1.155
3.894ValVal: 3.894 ± 1.457
0.649ValTrp: 0.649 ± 1.192
0.649ValTyr: 0.649 ± 0.539
0.0ValXaa: 0.0 ± 0.0
Trp
0.649TrpAla: 0.649 ± 0.422
0.0TrpCys: 0.0 ± 0.0
0.649TrpAsp: 0.649 ± 0.422
0.0TrpGlu: 0.0 ± 0.0
1.298TrpPhe: 1.298 ± 0.556
0.0TrpGly: 0.0 ± 0.0
0.649TrpHis: 0.649 ± 0.422
0.0TrpIle: 0.0 ± 0.0
1.298TrpLys: 1.298 ± 1.215
0.649TrpLeu: 0.649 ± 0.572
0.0TrpMet: 0.0 ± 0.0
2.596TrpAsn: 2.596 ± 1.064
1.298TrpPro: 1.298 ± 0.843
0.0TrpGln: 0.0 ± 0.0
0.649TrpArg: 0.649 ± 0.539
3.245TrpSer: 3.245 ± 0.928
1.298TrpThr: 1.298 ± 0.663
0.649TrpVal: 0.649 ± 0.747
0.649TrpTrp: 0.649 ± 0.539
0.649TrpTyr: 0.649 ± 0.422
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.191TyrAla: 5.191 ± 1.255
1.947TyrCys: 1.947 ± 1.717
2.596TyrAsp: 2.596 ± 0.862
1.947TyrGlu: 1.947 ± 1.148
1.298TyrPhe: 1.298 ± 0.843
4.543TyrGly: 4.543 ± 1.274
1.298TyrHis: 1.298 ± 1.145
1.298TyrIle: 1.298 ± 0.843
1.947TyrLys: 1.947 ± 0.794
4.543TyrLeu: 4.543 ± 1.948
1.298TyrMet: 1.298 ± 0.663
2.596TyrAsn: 2.596 ± 0.862
0.0TyrPro: 0.0 ± 0.0
3.245TyrGln: 3.245 ± 1.268
3.245TyrArg: 3.245 ± 1.305
1.947TyrSer: 1.947 ± 0.794
1.298TyrThr: 1.298 ± 1.239
2.596TyrVal: 2.596 ± 0.696
0.0TyrTrp: 0.0 ± 0.0
1.298TyrTyr: 1.298 ± 1.145
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 6 proteins (1542 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski