Flavimobilis marinus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micro

Average proteome isoelectric point is 6.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2643 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1I2GLJ4|A0A1I2GLJ4_9MICO Chemotaxis phosphatase CheX OS=Flavimobilis marinus OX=285351 GN=SAMN04488035_1851 PE=4 SV=1
MM1 pKa = 6.96TAAGTPRR8 pKa = 11.84RR9 pKa = 11.84SLRR12 pKa = 11.84AVGAIAALGLVLTACADD29 pKa = 3.56TSEE32 pKa = 5.38GDD34 pKa = 3.86DD35 pKa = 3.56PTATGGTAGGGTDD48 pKa = 4.0SISVGTTDD56 pKa = 4.96VITSLDD62 pKa = 3.58PAGSYY67 pKa = 11.34DD68 pKa = 3.46NGSFAVQNQVFPFLLNTPYY87 pKa = 10.83GSPDD91 pKa = 3.56VEE93 pKa = 3.89PDD95 pKa = 3.01IAEE98 pKa = 4.28SAEE101 pKa = 3.81FTAPNEE107 pKa = 3.95YY108 pKa = 9.34TVTLKK113 pKa = 10.98EE114 pKa = 4.14GLTFANGHH122 pKa = 6.04EE123 pKa = 4.48LTSSDD128 pKa = 3.4VKK130 pKa = 10.92FSFDD134 pKa = 3.51RR135 pKa = 11.84QLGIADD141 pKa = 3.9PNGPSSLLYY150 pKa = 10.92NLDD153 pKa = 3.31SVAAPDD159 pKa = 3.39EE160 pKa = 4.27RR161 pKa = 11.84TVVFTLKK168 pKa = 10.58SEE170 pKa = 4.16NDD172 pKa = 3.17QTFPQILSSPVGPIVDD188 pKa = 3.95EE189 pKa = 4.62EE190 pKa = 4.69VFSPTEE196 pKa = 3.84LTPADD201 pKa = 3.76TIVAEE206 pKa = 4.39KK207 pKa = 10.95AFGGQYY213 pKa = 10.75LITDD217 pKa = 3.57YY218 pKa = 11.33TEE220 pKa = 4.27NEE222 pKa = 4.42LIRR225 pKa = 11.84YY226 pKa = 7.48EE227 pKa = 4.13AFEE230 pKa = 5.97DD231 pKa = 4.04YY232 pKa = 10.32MGLLEE237 pKa = 4.19PAVTKK242 pKa = 10.71VVTAQYY248 pKa = 8.37FTEE251 pKa = 4.25EE252 pKa = 4.15TSLKK256 pKa = 10.64LAVQQGDD263 pKa = 3.15VDD265 pKa = 3.86VAFRR269 pKa = 11.84SLSPTDD275 pKa = 4.08LADD278 pKa = 4.08LAQDD282 pKa = 3.57EE283 pKa = 4.74NVTVHH288 pKa = 6.82EE289 pKa = 5.04GPGGEE294 pKa = 3.43IRR296 pKa = 11.84YY297 pKa = 9.32IVFNFATQPYY307 pKa = 8.21GTDD310 pKa = 2.91TADD313 pKa = 3.45ADD315 pKa = 3.92EE316 pKa = 4.82AKK318 pKa = 10.76ALAVRR323 pKa = 11.84QAAAHH328 pKa = 5.97LLDD331 pKa = 3.81RR332 pKa = 11.84QALSEE337 pKa = 4.41EE338 pKa = 4.78IYY340 pKa = 10.59QGSFTPLYY348 pKa = 10.57SYY350 pKa = 11.35VPDD353 pKa = 4.28GLTGAAEE360 pKa = 4.12PLKK363 pKa = 10.47EE364 pKa = 4.39LYY366 pKa = 10.64GDD368 pKa = 3.79GAGAPDD374 pKa = 4.2ADD376 pKa = 3.81AAAAALSEE384 pKa = 4.67AGVEE388 pKa = 4.35TPVALNLQYY397 pKa = 11.28SPDD400 pKa = 3.57HH401 pKa = 6.48YY402 pKa = 11.26GNSSDD407 pKa = 4.48EE408 pKa = 4.18EE409 pKa = 4.34YY410 pKa = 11.85AMIEE414 pKa = 4.13AQLEE418 pKa = 4.08ASGLFDD424 pKa = 4.59VSLQSTLWDD433 pKa = 3.61TYY435 pKa = 7.98STEE438 pKa = 3.86RR439 pKa = 11.84RR440 pKa = 11.84EE441 pKa = 4.39DD442 pKa = 3.43VYY444 pKa = 10.88PAYY447 pKa = 10.28QLGWFPDD454 pKa = 3.67YY455 pKa = 11.48SDD457 pKa = 3.97ADD459 pKa = 3.75NYY461 pKa = 11.0LSPFFLPEE469 pKa = 3.76NFLGNHH475 pKa = 5.81YY476 pKa = 10.32EE477 pKa = 4.43DD478 pKa = 5.09DD479 pKa = 4.03AATEE483 pKa = 4.83AILGQASEE491 pKa = 4.35ADD493 pKa = 3.57EE494 pKa = 4.39AARR497 pKa = 11.84TALIEE502 pKa = 4.18DD503 pKa = 3.77AQRR506 pKa = 11.84IVAEE510 pKa = 4.58DD511 pKa = 4.54LSTLPYY517 pKa = 10.46LQGAQVAVAGTDD529 pKa = 3.21ITGVTLDD536 pKa = 3.42ASFKK540 pKa = 10.46FRR542 pKa = 11.84YY543 pKa = 9.76APLGRR548 pKa = 4.77

Molecular weight: 58.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1I2HW18|A0A1I2HW18_9MICO Ribosomal protein S18 acetylase RimI OS=Flavimobilis marinus OX=285351 GN=SAMN04488035_2546 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AKK15 pKa = 8.7THH17 pKa = 5.16GFRR20 pKa = 11.84LRR22 pKa = 11.84MSTRR26 pKa = 11.84AGRR29 pKa = 11.84AILAARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.65GRR40 pKa = 11.84SEE42 pKa = 3.94LSAA45 pKa = 4.73

Molecular weight: 5.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2643

0

2643

894391

33

2433

338.4

35.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.351 ± 0.074

0.56 ± 0.011

6.319 ± 0.039

5.647 ± 0.045

2.63 ± 0.03

9.062 ± 0.043

2.07 ± 0.024

3.417 ± 0.034

1.8 ± 0.036

10.208 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.749 ± 0.019

1.622 ± 0.026

5.628 ± 0.038

2.714 ± 0.023

7.589 ± 0.048

5.144 ± 0.031

6.324 ± 0.044

9.855 ± 0.054

1.445 ± 0.018

1.868 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski