Capybara microvirus Cap1_SP_45

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVM4|A0A4V1FVM4_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_45 OX=2584778 PE=4 SV=1
MM1 pKa = 7.61SNNNSQTINISKK13 pKa = 9.6ASKK16 pKa = 9.78YY17 pKa = 10.84SRR19 pKa = 11.84ISLDD23 pKa = 3.46EE24 pKa = 3.98AHH26 pKa = 6.81LTTLDD31 pKa = 3.88FGQIMPIYY39 pKa = 9.79SRR41 pKa = 11.84AIIPGDD47 pKa = 3.91DD48 pKa = 3.68LSIDD52 pKa = 3.7TNVFTRR58 pKa = 11.84TSPLVYY64 pKa = 9.73PSFVNAHH71 pKa = 5.7LTLVSVFVPYY81 pKa = 10.42YY82 pKa = 9.17QLSPFMEE89 pKa = 4.65PFFAGVPNIGSKK101 pKa = 8.27VVKK104 pKa = 10.52LPLLTNHH111 pKa = 7.33IIDD114 pKa = 4.81HH115 pKa = 6.85LFTDD119 pKa = 5.16LAQTLNIGKK128 pKa = 9.59IGQIGVNPDD137 pKa = 4.11IIWTTTDD144 pKa = 2.81NLKK147 pKa = 11.01YY148 pKa = 9.68GTQLNYY154 pKa = 10.4KK155 pKa = 8.78GRR157 pKa = 11.84LMLKK161 pKa = 9.54VLNSLGYY168 pKa = 9.38QVSKK172 pKa = 10.6NVSWKK177 pKa = 10.36SSVDD181 pKa = 3.41NEE183 pKa = 4.5YY184 pKa = 11.14KK185 pKa = 10.69NSPVTLNPLPFISYY199 pKa = 10.0IKK201 pKa = 10.43VYY203 pKa = 10.75KK204 pKa = 10.48DD205 pKa = 2.82WFSSNKK211 pKa = 9.88SFNTSYY217 pKa = 10.82VASILNRR224 pKa = 11.84IQTEE228 pKa = 3.99SDD230 pKa = 3.78FEE232 pKa = 4.1FTPQIINSLFDD243 pKa = 3.98YY244 pKa = 10.91LRR246 pKa = 11.84LLYY249 pKa = 9.73DD250 pKa = 3.18TDD252 pKa = 4.06YY253 pKa = 9.57FTTAWQYY260 pKa = 11.58NNYY263 pKa = 9.56PSDD266 pKa = 3.7SSKK269 pKa = 10.17TSTDD273 pKa = 3.06ILPDD277 pKa = 4.05PSWSGLYY284 pKa = 10.29DD285 pKa = 3.45GNRR288 pKa = 11.84FLINPNEE295 pKa = 3.98NLADD299 pKa = 3.61QSDD302 pKa = 4.27PEE304 pKa = 4.31FLGATTVRR312 pKa = 11.84LLSVLDD318 pKa = 3.54KK319 pKa = 10.72YY320 pKa = 10.89IRR322 pKa = 11.84RR323 pKa = 11.84NSYY326 pKa = 10.99AGTKK330 pKa = 9.28AAARR334 pKa = 11.84VLSRR338 pKa = 11.84FGIKK342 pKa = 8.54STEE345 pKa = 4.11FKK347 pKa = 10.69SQYY350 pKa = 10.89SDD352 pKa = 2.79ILNVDD357 pKa = 4.6SIRR360 pKa = 11.84LNIGDD365 pKa = 3.8VTSTAEE371 pKa = 4.11TTEE374 pKa = 4.2MPLGSYY380 pKa = 9.52AGKK383 pKa = 10.47AILGGKK389 pKa = 9.59GGAKK393 pKa = 9.89LKK395 pKa = 11.21SNDD398 pKa = 3.18FGHH401 pKa = 6.52FFVIAYY407 pKa = 9.41ISAKK411 pKa = 8.32TCYY414 pKa = 9.5PSGFDD419 pKa = 3.61RR420 pKa = 11.84EE421 pKa = 4.42CLKK424 pKa = 10.91SHH426 pKa = 7.18LYY428 pKa = 10.7DD429 pKa = 4.8FYY431 pKa = 11.04TPEE434 pKa = 3.94FDD436 pKa = 5.07GVGLQPISMQEE447 pKa = 3.81LSSEE451 pKa = 4.16NLNFTYY457 pKa = 10.45SEE459 pKa = 4.22PWHH462 pKa = 6.46GNDD465 pKa = 3.07VFGFTEE471 pKa = 4.84RR472 pKa = 11.84YY473 pKa = 8.5NEE475 pKa = 3.72YY476 pKa = 10.6RR477 pKa = 11.84FGKK480 pKa = 10.24DD481 pKa = 2.76RR482 pKa = 11.84ITGDD486 pKa = 3.49MLRR489 pKa = 11.84DD490 pKa = 3.31MDD492 pKa = 4.68FKK494 pKa = 10.54PWYY497 pKa = 9.94LSRR500 pKa = 11.84EE501 pKa = 4.16DD502 pKa = 3.61LTIRR506 pKa = 11.84DD507 pKa = 3.69QDD509 pKa = 3.49VTAQSDD515 pKa = 3.66PLLYY519 pKa = 10.79YY520 pKa = 9.69PINNEE525 pKa = 3.41SSYY528 pKa = 11.07TRR530 pKa = 11.84IFANTSSTLYY540 pKa = 10.28DD541 pKa = 3.52HH542 pKa = 7.53RR543 pKa = 11.84DD544 pKa = 3.32HH545 pKa = 7.27FFMSCYY551 pKa = 10.09FNVSGTRR558 pKa = 11.84PILNLSDD565 pKa = 4.02SLSLGHH571 pKa = 7.41GDD573 pKa = 3.14INLNKK578 pKa = 10.04EE579 pKa = 4.17GLVLSS584 pKa = 4.53

Molecular weight: 66.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W3U8|A0A4P8W3U8_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_45 OX=2584778 PE=3 SV=1
MM1 pKa = 7.72SYY3 pKa = 9.2TFKK6 pKa = 11.16VEE8 pKa = 4.05NKK10 pKa = 6.67THH12 pKa = 6.01YY13 pKa = 10.48FGEE16 pKa = 4.16NTKK19 pKa = 10.64LYY21 pKa = 10.74NNIVNPRR28 pKa = 11.84SYY30 pKa = 11.26AALHH34 pKa = 5.96SKK36 pKa = 9.48QLSYY40 pKa = 10.79YY41 pKa = 8.23VRR43 pKa = 11.84SYY45 pKa = 12.0YY46 pKa = 10.67EE47 pKa = 3.81FLKK50 pKa = 10.23TKK52 pKa = 9.72YY53 pKa = 10.69LNGKK57 pKa = 6.9TMFLTFTYY65 pKa = 10.02CDD67 pKa = 3.18NALPILYY74 pKa = 9.51GIPTVDD80 pKa = 3.47NNNIRR85 pKa = 11.84YY86 pKa = 9.01LLRR89 pKa = 11.84NSYY92 pKa = 10.14LPKK95 pKa = 9.92FVASKK100 pKa = 9.81GYY102 pKa = 9.97KK103 pKa = 7.17MSYY106 pKa = 9.23MIVPEE111 pKa = 4.08FGEE114 pKa = 4.79GKK116 pKa = 10.21GSRR119 pKa = 11.84GVGNNPHH126 pKa = 5.96FHH128 pKa = 6.89CLLHH132 pKa = 6.47FYY134 pKa = 10.67KK135 pKa = 10.18EE136 pKa = 4.21TGEE139 pKa = 4.07PFAYY143 pKa = 10.31ADD145 pKa = 4.59GVDD148 pKa = 3.86IYY150 pKa = 11.9NKK152 pKa = 9.89ILNLWQGTNPDD163 pKa = 3.32GTITRR168 pKa = 11.84DD169 pKa = 3.11PLKK172 pKa = 10.21YY173 pKa = 10.23HH174 pKa = 6.82FGMVQASANGLYY186 pKa = 9.86IDD188 pKa = 5.27DD189 pKa = 4.75YY190 pKa = 10.71KK191 pKa = 11.34ACSYY195 pKa = 9.92VSKK198 pKa = 9.88YY199 pKa = 7.85TSKK202 pKa = 11.11DD203 pKa = 2.7INTRR207 pKa = 11.84TKK209 pKa = 9.95ISQIEE214 pKa = 3.99KK215 pKa = 10.4AIEE218 pKa = 4.01LDD220 pKa = 3.62CFHH223 pKa = 7.02YY224 pKa = 9.95CTDD227 pKa = 4.26SSICDD232 pKa = 3.08IMNSLNVSDD241 pKa = 4.64SLGSYY246 pKa = 7.74LHH248 pKa = 6.73KK249 pKa = 10.59KK250 pKa = 9.27YY251 pKa = 10.91LSDD254 pKa = 4.07DD255 pKa = 3.42SPYY258 pKa = 10.97RR259 pKa = 11.84KK260 pKa = 10.24DD261 pKa = 3.02FEE263 pKa = 4.53KK264 pKa = 10.53RR265 pKa = 11.84VKK267 pKa = 10.54QMSAVIFADD276 pKa = 3.0IKK278 pKa = 10.96NRR280 pKa = 11.84YY281 pKa = 7.47LPKK284 pKa = 9.77VFMSKK289 pKa = 10.46GYY291 pKa = 10.98GDD293 pKa = 3.66YY294 pKa = 11.37ALNFVNEE301 pKa = 4.36DD302 pKa = 3.28FKK304 pKa = 11.83LPIPQSNPNAKK315 pKa = 9.44VQGTIFIDD323 pKa = 3.75LPLYY327 pKa = 10.53LYY329 pKa = 10.49RR330 pKa = 11.84KK331 pKa = 9.93LFTDD335 pKa = 2.89VHH337 pKa = 7.76KK338 pKa = 10.81DD339 pKa = 3.09EE340 pKa = 5.26KK341 pKa = 11.47GNVIYY346 pKa = 10.74VLNDD350 pKa = 3.18TGKK353 pKa = 9.42HH354 pKa = 4.25YY355 pKa = 11.34KK356 pKa = 7.94NTRR359 pKa = 11.84LLKK362 pKa = 10.77DD363 pKa = 3.0IDD365 pKa = 3.85KK366 pKa = 9.62TCNDD370 pKa = 3.8VACLISDD377 pKa = 4.11NFDD380 pKa = 3.36MPLDD384 pKa = 3.77QLSSLSYY391 pKa = 10.54DD392 pKa = 3.32YY393 pKa = 11.51SLYY396 pKa = 9.61KK397 pKa = 10.2HH398 pKa = 6.66IYY400 pKa = 7.11EE401 pKa = 4.45HH402 pKa = 6.24HH403 pKa = 6.62TFDD406 pKa = 3.84IFQPHH411 pKa = 6.34EE412 pKa = 4.49LDD414 pKa = 3.4PLGDD418 pKa = 3.53YY419 pKa = 10.47TRR421 pKa = 11.84FLVSGFEE428 pKa = 4.18TEE430 pKa = 4.26SFEE433 pKa = 4.4EE434 pKa = 4.96FYY436 pKa = 10.77FVKK439 pKa = 10.17KK440 pKa = 10.47RR441 pKa = 11.84KK442 pKa = 9.17LLQSRR447 pKa = 11.84LTYY450 pKa = 10.1EE451 pKa = 3.75FHH453 pKa = 7.63PYY455 pKa = 9.17FAPLIPYY462 pKa = 9.08FRR464 pKa = 11.84IIDD467 pKa = 3.8NFVDD471 pKa = 3.67NLNSEE476 pKa = 4.23NDD478 pKa = 3.12KK479 pKa = 11.27ALYY482 pKa = 10.42DD483 pKa = 3.72NYY485 pKa = 11.29LEE487 pKa = 4.61IIRR490 pKa = 11.84LRR492 pKa = 11.84KK493 pKa = 9.11VHH495 pKa = 6.43NKK497 pKa = 8.19MLL499 pKa = 4.26

Molecular weight: 58.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1696

101

584

339.2

38.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.894 ± 1.149

1.179 ± 0.539

6.958 ± 0.319

4.127 ± 0.576

5.483 ± 0.645

5.425 ± 0.461

2.358 ± 0.376

6.309 ± 0.39

6.663 ± 0.944

10.436 ± 0.351

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.005 ± 0.44

7.724 ± 0.478

4.068 ± 0.837

3.243 ± 0.927

3.656 ± 0.134

9.198 ± 1.266

5.307 ± 0.864

4.422 ± 0.624

0.884 ± 0.286

5.66 ± 1.395
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski