Pacific flying fox associated cyclovirus-1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Bat associated cyclovirus 14

Average proteome isoelectric point is 8.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTJ3|A0A140CTJ3_9CIRC ATP-dependent helicase Rep OS=Pacific flying fox associated cyclovirus-1 OX=1795983 PE=3 SV=1
MM1 pKa = 7.45PGEE4 pKa = 4.51PKK6 pKa = 9.57SHH8 pKa = 6.0RR9 pKa = 11.84RR10 pKa = 11.84YY11 pKa = 10.77VFTLNNYY18 pKa = 10.04SDD20 pKa = 5.35DD21 pKa = 3.85DD22 pKa = 4.03VARR25 pKa = 11.84LQQLEE30 pKa = 3.92ARR32 pKa = 11.84YY33 pKa = 8.3MVFGKK38 pKa = 10.25EE39 pKa = 3.92VAPTSGTKK47 pKa = 10.01HH48 pKa = 5.3LQGFINFGRR57 pKa = 11.84AVRR60 pKa = 11.84FNSARR65 pKa = 11.84KK66 pKa = 9.12LVGGDD71 pKa = 3.08GVTEE75 pKa = 4.2VTDD78 pKa = 4.23RR79 pKa = 11.84AASGGPNGDD88 pKa = 3.73CFDD91 pKa = 4.35YY92 pKa = 10.84LPHH95 pKa = 7.02GNDD98 pKa = 3.08PATRR102 pKa = 11.84GFVFLGKK109 pKa = 8.46PTSQGRR115 pKa = 11.84RR116 pKa = 11.84TDD118 pKa = 3.57LQRR121 pKa = 11.84VADD124 pKa = 4.17LAKK127 pKa = 10.58QSGTTAHH134 pKa = 6.74TIARR138 pKa = 11.84EE139 pKa = 3.94FPVEE143 pKa = 4.29FIKK146 pKa = 10.89YY147 pKa = 9.94GRR149 pKa = 11.84GITNLLRR156 pKa = 11.84TINPIPSRR164 pKa = 11.84SKK166 pKa = 8.04PTIVVVLVGAPGVGKK181 pKa = 10.52SRR183 pKa = 11.84FANEE187 pKa = 3.94VGSGLGDD194 pKa = 3.5TYY196 pKa = 11.27YY197 pKa = 10.95KK198 pKa = 10.51PRR200 pKa = 11.84GEE202 pKa = 3.94WWDD205 pKa = 4.56GYY207 pKa = 9.1CQQRR211 pKa = 11.84SVIIDD216 pKa = 3.92DD217 pKa = 4.33FYY219 pKa = 11.87GWIKK223 pKa = 10.75YY224 pKa = 10.28DD225 pKa = 4.1EE226 pKa = 4.44LLKK229 pKa = 10.69ICDD232 pKa = 4.0RR233 pKa = 11.84YY234 pKa = 8.26PHH236 pKa = 6.41KK237 pKa = 11.26VPVKK241 pKa = 9.99GGYY244 pKa = 8.95EE245 pKa = 4.19EE246 pKa = 4.38FTSEE250 pKa = 4.47YY251 pKa = 11.25VFITSNSNVDD261 pKa = 2.88QWYY264 pKa = 9.92KK265 pKa = 10.4FDD267 pKa = 4.24NYY269 pKa = 10.85SPAAIHH275 pKa = 6.52RR276 pKa = 11.84RR277 pKa = 11.84LSVYY281 pKa = 10.22VGLMCDD287 pKa = 3.1GSTAHH292 pKa = 6.16FPEE295 pKa = 4.65WSPKK299 pKa = 10.09FSWFDD304 pKa = 3.72SAWTTMQIKK313 pKa = 7.8WTVHH317 pKa = 6.03DD318 pKa = 4.31MVNKK322 pKa = 9.82VV323 pKa = 2.85

Molecular weight: 36.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTJ3|A0A140CTJ3_9CIRC ATP-dependent helicase Rep OS=Pacific flying fox associated cyclovirus-1 OX=1795983 PE=3 SV=1
MM1 pKa = 7.49RR2 pKa = 11.84RR3 pKa = 11.84MRR5 pKa = 11.84LRR7 pKa = 11.84RR8 pKa = 11.84YY9 pKa = 8.76RR10 pKa = 11.84PRR12 pKa = 11.84RR13 pKa = 11.84VVAPRR18 pKa = 11.84RR19 pKa = 11.84GIRR22 pKa = 11.84KK23 pKa = 8.38RR24 pKa = 11.84RR25 pKa = 11.84SFRR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84NRR33 pKa = 11.84KK34 pKa = 8.41YY35 pKa = 10.11DD36 pKa = 3.24VHH38 pKa = 6.88NFRR41 pKa = 11.84LKK43 pKa = 9.93SGSYY47 pKa = 10.3VVDD50 pKa = 3.85LTPGVNGGARR60 pKa = 11.84VVGEE64 pKa = 3.88AVVLNQLPINFNGLTLLYY82 pKa = 10.32SHH84 pKa = 7.11IRR86 pKa = 11.84ITKK89 pKa = 8.4AVYY92 pKa = 10.12RR93 pKa = 11.84FIPMYY98 pKa = 7.83TQRR101 pKa = 11.84TWPDD105 pKa = 3.2PATNDD110 pKa = 3.06TDD112 pKa = 3.91LPEE115 pKa = 4.98ILSTQWYY122 pKa = 9.47GPALDD127 pKa = 4.14VDD129 pKa = 4.98SNPSQSYY136 pKa = 9.95NVLRR140 pKa = 11.84SDD142 pKa = 4.12FLTRR146 pKa = 11.84NHH148 pKa = 5.1QWNRR152 pKa = 11.84PFKK155 pKa = 9.97RR156 pKa = 11.84VLYY159 pKa = 9.35PKK161 pKa = 10.39VNYY164 pKa = 9.51FVTASTYY171 pKa = 10.69VDD173 pKa = 3.19NAAPNSNTACALKK186 pKa = 10.43KK187 pKa = 9.69MPWVRR192 pKa = 11.84TSGSNAYY199 pKa = 10.33DD200 pKa = 3.63NLQCGVMYY208 pKa = 10.44VGAIGGPAGAAVKK221 pKa = 10.48YY222 pKa = 9.75RR223 pKa = 11.84VEE225 pKa = 3.6RR226 pKa = 11.84TYY228 pKa = 11.0YY229 pKa = 8.42VQARR233 pKa = 11.84KK234 pKa = 8.87VV235 pKa = 3.19

Molecular weight: 27.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

558

235

323

279.0

31.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.272 ± 0.569

1.075 ± 0.133

5.556 ± 0.769

2.867 ± 0.941

4.48 ± 0.888

8.065 ± 1.247

1.971 ± 0.411

3.763 ± 0.464

5.018 ± 0.451

5.914 ± 0.529

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.792 ± 0.199

5.376 ± 1.099

5.914 ± 0.277

3.047 ± 0.04

9.498 ± 2.185

6.093 ± 0.332

6.272 ± 0.186

9.14 ± 0.635

2.151 ± 0.265

5.735 ± 0.635
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski