Yellow-breasted capuchin simian foamy virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Simiispumavirus

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0G3Y5C1|A0A0G3Y5C1_9RETR Env leader protein OS=Yellow-breasted capuchin simian foamy virus OX=2170206 GN=env PE=4 SV=1
MM1 pKa = 7.83AAQQEE6 pKa = 4.41EE7 pKa = 5.0TEE9 pKa = 4.33LKK11 pKa = 10.47EE12 pKa = 4.1FLAEE16 pKa = 4.85FPFNDD21 pKa = 4.31PDD23 pKa = 4.47DD24 pKa = 5.05DD25 pKa = 3.86LWVPVNIPPAPFQPYY40 pKa = 10.4ADD42 pKa = 3.64PHH44 pKa = 7.77DD45 pKa = 4.41EE46 pKa = 4.38EE47 pKa = 4.65EE48 pKa = 5.29GEE50 pKa = 4.17YY51 pKa = 10.77LLPKK55 pKa = 9.19EE56 pKa = 4.33QVFTTPSEE64 pKa = 4.37AEE66 pKa = 3.71TSEE69 pKa = 5.12RR70 pKa = 11.84DD71 pKa = 3.56DD72 pKa = 4.56PLPGTSTTINEE83 pKa = 4.36PTGEE87 pKa = 4.01EE88 pKa = 4.35PKK90 pKa = 10.9FKK92 pKa = 9.72WLQVARR98 pKa = 11.84RR99 pKa = 11.84EE100 pKa = 3.95TDD102 pKa = 2.76YY103 pKa = 11.74DD104 pKa = 3.84RR105 pKa = 11.84FDD107 pKa = 3.83LGRR110 pKa = 11.84FFPDD114 pKa = 2.73RR115 pKa = 11.84LQRR118 pKa = 11.84EE119 pKa = 5.03FILQRR124 pKa = 11.84AILTAAGYY132 pKa = 10.05QPTLVEE138 pKa = 4.65HH139 pKa = 6.28CAKK142 pKa = 9.7MGWYY146 pKa = 10.23ACLQPHH152 pKa = 6.79HH153 pKa = 6.7GALGEE158 pKa = 4.29TTEE161 pKa = 4.86VYY163 pKa = 10.11YY164 pKa = 10.93KK165 pKa = 10.51CLKK168 pKa = 10.29CGSEE172 pKa = 3.79QWDD175 pKa = 3.66PLLYY179 pKa = 10.11IWDD182 pKa = 3.48KK183 pKa = 11.11HH184 pKa = 4.11MLMFKK189 pKa = 10.21RR190 pKa = 11.84AWTRR194 pKa = 11.84TPHH197 pKa = 5.69TSSPLSNLRR206 pKa = 11.84RR207 pKa = 11.84HH208 pKa = 6.6DD209 pKa = 4.91AICPGLNPLLPHH221 pKa = 6.93SSTEE225 pKa = 3.68PLLRR229 pKa = 11.84KK230 pKa = 9.19PRR232 pKa = 11.84RR233 pKa = 11.84DD234 pKa = 3.22PGDD237 pKa = 2.89RR238 pKa = 11.84WRR240 pKa = 11.84EE241 pKa = 3.74RR242 pKa = 11.84KK243 pKa = 9.56RR244 pKa = 11.84KK245 pKa = 8.95ISRR248 pKa = 11.84GGPTAVLPADD258 pKa = 3.64TFTYY262 pKa = 10.26ASEE265 pKa = 4.18WPQPEE270 pKa = 4.12RR271 pKa = 11.84MHH273 pKa = 7.21SGGLGTVPILVQTMQSKK290 pKa = 9.92CARR293 pKa = 11.84FEE295 pKa = 3.98MEE297 pKa = 3.83TLQNRR302 pKa = 11.84GIVV305 pKa = 3.3

Molecular weight:
35.16 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0G3Y3E1|A0A0G3Y3E1_9RETR Tas protein OS=Yellow-breasted capuchin simian foamy virus OX=2170206 GN=tas PE=4 SV=1
MM1 pKa = 7.28TAPPLLQLPVEE12 pKa = 4.51VKK14 pKa = 9.23KK15 pKa = 9.51TEE17 pKa = 4.54LNGFWDD23 pKa = 3.81TGAQITCIPEE33 pKa = 3.99AFLKK37 pKa = 10.8EE38 pKa = 4.14EE39 pKa = 4.1IPIGEE44 pKa = 4.11AQIKK48 pKa = 7.37TLHH51 pKa = 5.44GTKK54 pKa = 9.92LQPVYY59 pKa = 10.51YY60 pKa = 10.18LKK62 pKa = 10.9FKK64 pKa = 10.56ILGRR68 pKa = 11.84KK69 pKa = 8.75VEE71 pKa = 4.29AEE73 pKa = 4.16VTTSPFDD80 pKa = 3.54YY81 pKa = 11.04VIISPSDD88 pKa = 3.41IPWYY92 pKa = 10.27KK93 pKa = 10.0PQPLEE98 pKa = 4.12LTVKK102 pKa = 10.81LPVQDD107 pKa = 4.66FKK109 pKa = 11.8KK110 pKa = 10.75EE111 pKa = 4.23LINKK115 pKa = 9.37ANINNEE121 pKa = 4.14EE122 pKa = 4.11KK123 pKa = 10.66KK124 pKa = 10.53QLAKK128 pKa = 11.01LLDD131 pKa = 4.07KK132 pKa = 11.4YY133 pKa = 11.2DD134 pKa = 4.05ILWQQWEE141 pKa = 4.33NQVGHH146 pKa = 6.68RR147 pKa = 11.84KK148 pKa = 9.22IPPHH152 pKa = 6.48NIATGTVAPRR162 pKa = 11.84PQRR165 pKa = 11.84QYY167 pKa = 11.27HH168 pKa = 6.52INTKK172 pKa = 10.09AKK174 pKa = 10.19PSIQQVIDD182 pKa = 3.96DD183 pKa = 4.51LLKK186 pKa = 10.74QGVLVKK192 pKa = 9.25QTSVMNTPVYY202 pKa = 9.64PVPKK206 pKa = 9.66PDD208 pKa = 3.59GKK210 pKa = 9.91WRR212 pKa = 11.84MVLDD216 pKa = 3.44YY217 pKa = 10.78RR218 pKa = 11.84AVNKK222 pKa = 7.69TIPLIGAQNQHH233 pKa = 5.82SLGILTNLVRR243 pKa = 11.84QKK245 pKa = 10.91YY246 pKa = 9.88KK247 pKa = 10.25STIDD251 pKa = 3.45LSNGFWAHH259 pKa = 7.56PITKK263 pKa = 9.88DD264 pKa = 3.77SQWITAFTWEE274 pKa = 4.61GKK276 pKa = 6.41QHH278 pKa = 4.39VWTRR282 pKa = 11.84LPQGFLNSPALFTADD297 pKa = 4.02VVDD300 pKa = 4.66LLKK303 pKa = 10.56DD304 pKa = 3.19IPGISVYY311 pKa = 10.76VDD313 pKa = 4.41DD314 pKa = 5.79IYY316 pKa = 11.35FSTEE320 pKa = 3.79TVSEE324 pKa = 4.05HH325 pKa = 6.73LKK327 pKa = 10.38ILEE330 pKa = 4.2KK331 pKa = 10.65VFKK334 pKa = 10.28ILLEE338 pKa = 4.2AGYY341 pKa = 9.96IVSLKK346 pKa = 10.46KK347 pKa = 10.39SALLRR352 pKa = 11.84HH353 pKa = 5.81EE354 pKa = 4.26VTFLGFSITQTGRR367 pKa = 11.84GLTSEE372 pKa = 4.86FKK374 pKa = 11.01DD375 pKa = 3.35KK376 pKa = 10.64IQNITPPKK384 pKa = 8.33TLKK387 pKa = 10.15EE388 pKa = 4.02LQSILGLFNFARR400 pKa = 11.84NFVPNFSEE408 pKa = 4.44IIKK411 pKa = 9.68PLYY414 pKa = 10.46SLISTAEE421 pKa = 3.92GNNIKK426 pKa = 8.34WTSEE430 pKa = 3.75HH431 pKa = 5.72TRR433 pKa = 11.84HH434 pKa = 6.45LEE436 pKa = 4.31EE437 pKa = 4.54IVSALNHH444 pKa = 6.5AGNLEE449 pKa = 3.92QRR451 pKa = 11.84DD452 pKa = 4.16DD453 pKa = 3.97EE454 pKa = 4.72SPLVVKK460 pKa = 10.42LNASPKK466 pKa = 8.09TGYY469 pKa = 9.03IRR471 pKa = 11.84YY472 pKa = 8.85YY473 pKa = 10.79NKK475 pKa = 10.51GGQKK479 pKa = 9.37PIAYY483 pKa = 9.15ASHH486 pKa = 6.72VFTNTEE492 pKa = 4.05SKK494 pKa = 9.07FTPLEE499 pKa = 4.07KK500 pKa = 10.8LLVTMHH506 pKa = 7.05KK507 pKa = 10.73ALIKK511 pKa = 10.8AIDD514 pKa = 3.85LALGQPIEE522 pKa = 4.45VYY524 pKa = 10.75SPIVSMQKK532 pKa = 9.77LQKK535 pKa = 9.64TPLPEE540 pKa = 4.18RR541 pKa = 11.84KK542 pKa = 9.46ALSTRR547 pKa = 11.84WITWLSYY554 pKa = 11.25LEE556 pKa = 4.15DD557 pKa = 3.56PRR559 pKa = 11.84IIFHH563 pKa = 6.39YY564 pKa = 10.71DD565 pKa = 2.58KK566 pKa = 10.79TLPDD570 pKa = 4.04LKK572 pKa = 10.68NVPEE576 pKa = 4.86TITEE580 pKa = 4.13KK581 pKa = 10.46QPKK584 pKa = 8.45ILPIIEE590 pKa = 4.23YY591 pKa = 10.39AAVFYY596 pKa = 10.65TDD598 pKa = 3.37GSAIRR603 pKa = 11.84SPDD606 pKa = 3.12KK607 pKa = 11.19NKK609 pKa = 10.31SHH611 pKa = 6.66SSGMGIVQAIFKK623 pKa = 10.26PEE625 pKa = 3.77LTIEE629 pKa = 4.31HH630 pKa = 6.35QWTIPLGDD638 pKa = 3.58HH639 pKa = 5.95TAQYY643 pKa = 11.49AEE645 pKa = 3.83ISAVEE650 pKa = 4.21FACKK654 pKa = 9.69KK655 pKa = 10.2ANNISGPVLIVTDD668 pKa = 3.44SDD670 pKa = 4.12YY671 pKa = 11.43VARR674 pKa = 11.84SVNEE678 pKa = 3.8EE679 pKa = 3.95LPFWRR684 pKa = 11.84SNGFVNNKK692 pKa = 9.32KK693 pKa = 10.41KK694 pKa = 9.96PLKK697 pKa = 10.46HH698 pKa = 5.21ISKK701 pKa = 9.25WKK703 pKa = 10.21NISDD707 pKa = 3.87SLLLKK712 pKa = 10.21RR713 pKa = 11.84DD714 pKa = 3.11ITIVHH719 pKa = 6.41EE720 pKa = 4.73PGHH723 pKa = 5.75QPSHH727 pKa = 5.76TSIHH731 pKa = 4.92TQGNNLADD739 pKa = 3.7KK740 pKa = 10.66LATQGSYY747 pKa = 10.61NVNSIVKK754 pKa = 9.9NPSLDD759 pKa = 3.61AEE761 pKa = 4.47LEE763 pKa = 4.03QLINGHH769 pKa = 5.51SMKK772 pKa = 10.45GYY774 pKa = 7.63PSKK777 pKa = 11.0YY778 pKa = 10.15KK779 pKa = 10.85YY780 pKa = 9.77ILKK783 pKa = 9.88EE784 pKa = 3.71GQVFVLRR791 pKa = 11.84PEE793 pKa = 4.33GEE795 pKa = 4.05KK796 pKa = 10.11IIPPKK801 pKa = 10.06SDD803 pKa = 2.8RR804 pKa = 11.84PALVKK809 pKa = 10.18VAHH812 pKa = 6.42EE813 pKa = 4.39FSHH816 pKa = 6.99AGRR819 pKa = 11.84EE820 pKa = 4.33ATVLRR825 pKa = 11.84LQDD828 pKa = 3.73KK829 pKa = 9.13YY830 pKa = 9.53WWPNMRR836 pKa = 11.84KK837 pKa = 9.73DD838 pKa = 4.01VISHH842 pKa = 5.81IRR844 pKa = 11.84MCKK847 pKa = 9.43PCLTTDD853 pKa = 3.45SSNLTPIPPKK863 pKa = 9.62PQQRR867 pKa = 11.84PKK869 pKa = 10.99KK870 pKa = 9.28PFDD873 pKa = 3.57KK874 pKa = 11.01FFIDD878 pKa = 4.29YY879 pKa = 10.24IGPLPPSHH887 pKa = 6.3GFAYY891 pKa = 10.62VLVVVDD897 pKa = 4.38AATGFTWLYY906 pKa = 5.84PTKK909 pKa = 10.62APSTNATITSLNILLGTAVPRR930 pKa = 11.84VLHH933 pKa = 6.51SDD935 pKa = 2.92QGSAFTSSAFADD947 pKa = 3.46WAKK950 pKa = 10.97EE951 pKa = 3.67KK952 pKa = 10.79GIQLEE957 pKa = 4.54FSTPYY962 pKa = 10.11HH963 pKa = 5.86PQSSGMVEE971 pKa = 3.9RR972 pKa = 11.84KK973 pKa = 9.31NRR975 pKa = 11.84EE976 pKa = 3.56IKK978 pKa = 10.6RR979 pKa = 11.84LITKK983 pKa = 9.73LLVGRR988 pKa = 11.84PTKK991 pKa = 9.9WYY993 pKa = 9.08PLIPTIQLALNNTYY1007 pKa = 10.43SVHH1010 pKa = 5.57YY1011 pKa = 9.93KK1012 pKa = 8.78KK1013 pKa = 9.09TPHH1016 pKa = 5.97QLLFGVDD1023 pKa = 3.65GNVPFANQDD1032 pKa = 3.55TLDD1035 pKa = 3.66LTRR1038 pKa = 11.84EE1039 pKa = 4.19EE1040 pKa = 4.36EE1041 pKa = 4.11LSLLSEE1047 pKa = 4.5VRR1049 pKa = 11.84TSLLPPSTPPASRR1062 pKa = 11.84RR1063 pKa = 11.84SWLPSVGLLVQEE1075 pKa = 4.63RR1076 pKa = 11.84VARR1079 pKa = 11.84PSQLRR1084 pKa = 11.84PKK1086 pKa = 8.41WRR1088 pKa = 11.84KK1089 pKa = 5.65PTPILEE1095 pKa = 4.4VVNDD1099 pKa = 3.9RR1100 pKa = 11.84TVVILDD1106 pKa = 3.4NQGQRR1111 pKa = 11.84RR1112 pKa = 11.84TVSIDD1117 pKa = 3.24NLKK1120 pKa = 8.92LTPHH1124 pKa = 6.49QDD1126 pKa = 3.12GTSNEE1131 pKa = 4.16PNGVDD1136 pKa = 3.34PLEE1139 pKa = 4.1QEE1141 pKa = 4.51KK1142 pKa = 10.3EE1143 pKa = 4.02HH1144 pKa = 7.19DD1145 pKa = 3.55NHH1147 pKa = 7.62DD1148 pKa = 3.37II1149 pKa = 4.09

Molecular weight:
130.03 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3429

305

1149

685.8

77.42

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.628 ± 0.529

1.633 ± 0.626

4.608 ± 0.168

5.862 ± 0.576

3.12 ± 0.182

5.745 ± 0.927

2.45 ± 0.324

6.183 ± 1.073

5.92 ± 1.295

9.536 ± 0.537

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.604 ± 0.427

5.133 ± 0.55

8.107 ± 1.17

5.016 ± 0.303

4.958 ± 0.748

6.328 ± 0.688

6.737 ± 0.325

5.862 ± 0.367

2.071 ± 0.24

3.5 ± 0.463

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski