Amino acid dipepetide frequency for Fusarium poae negative-stranded virus 2

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.714AlaAla: 3.714 ± 0.0
0.929AlaCys: 0.929 ± 0.0
2.786AlaAsp: 2.786 ± 0.0
3.714AlaGlu: 3.714 ± 0.0
1.857AlaPhe: 1.857 ± 0.0
0.929AlaGly: 0.929 ± 0.0
1.393AlaHis: 1.393 ± 0.0
4.178AlaIle: 4.178 ± 0.0
3.25AlaLys: 3.25 ± 0.0
3.714AlaLeu: 3.714 ± 0.0
1.393AlaMet: 1.393 ± 0.0
1.857AlaAsn: 1.857 ± 0.0
1.393AlaPro: 1.393 ± 0.0
1.393AlaGln: 1.393 ± 0.0
1.857AlaArg: 1.857 ± 0.0
4.178AlaSer: 4.178 ± 0.0
0.929AlaThr: 0.929 ± 0.0
4.643AlaVal: 4.643 ± 0.0
1.393AlaTrp: 1.393 ± 0.0
1.393AlaTyr: 1.393 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.464CysAla: 0.464 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.393CysAsp: 1.393 ± 0.0
0.464CysGlu: 0.464 ± 0.0
0.464CysPhe: 0.464 ± 0.0
0.464CysGly: 0.464 ± 0.0
0.464CysHis: 0.464 ± 0.0
0.464CysIle: 0.464 ± 0.0
0.464CysLys: 0.464 ± 0.0
0.464CysLeu: 0.464 ± 0.0
0.929CysMet: 0.929 ± 0.0
0.464CysAsn: 0.464 ± 0.0
0.0CysPro: 0.0 ± 0.0
1.393CysGln: 1.393 ± 0.0
1.393CysArg: 1.393 ± 0.0
0.929CysSer: 0.929 ± 0.0
0.464CysThr: 0.464 ± 0.0
0.464CysVal: 0.464 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.464CysTyr: 0.464 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.786AspAla: 2.786 ± 0.0
0.929AspCys: 0.929 ± 0.0
2.786AspAsp: 2.786 ± 0.0
5.107AspGlu: 5.107 ± 0.0
4.643AspPhe: 4.643 ± 0.0
1.857AspGly: 1.857 ± 0.0
1.393AspHis: 1.393 ± 0.0
2.786AspIle: 2.786 ± 0.0
5.107AspLys: 5.107 ± 0.0
5.107AspLeu: 5.107 ± 0.0
1.857AspMet: 1.857 ± 0.0
2.786AspAsn: 2.786 ± 0.0
3.714AspPro: 3.714 ± 0.0
1.393AspGln: 1.393 ± 0.0
2.786AspArg: 2.786 ± 0.0
3.25AspSer: 3.25 ± 0.0
3.25AspThr: 3.25 ± 0.0
1.857AspVal: 1.857 ± 0.0
1.857AspTrp: 1.857 ± 0.0
2.321AspTyr: 2.321 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.786GluAla: 2.786 ± 0.0
1.393GluCys: 1.393 ± 0.0
4.643GluAsp: 4.643 ± 0.0
9.285GluGlu: 9.285 ± 0.0
4.178GluPhe: 4.178 ± 0.0
1.857GluGly: 1.857 ± 0.0
0.929GluHis: 0.929 ± 0.0
5.107GluIle: 5.107 ± 0.0
5.107GluLys: 5.107 ± 0.0
9.285GluLeu: 9.285 ± 0.0
1.857GluMet: 1.857 ± 0.0
2.786GluAsn: 2.786 ± 0.0
4.178GluPro: 4.178 ± 0.0
1.857GluGln: 1.857 ± 0.0
4.178GluArg: 4.178 ± 0.0
7.428GluSer: 7.428 ± 0.0
4.178GluThr: 4.178 ± 0.0
5.571GluVal: 5.571 ± 0.0
1.857GluTrp: 1.857 ± 0.0
2.321GluTyr: 2.321 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.321PheAla: 2.321 ± 0.0
0.464PheCys: 0.464 ± 0.0
1.857PheAsp: 1.857 ± 0.0
4.178PheGlu: 4.178 ± 0.0
3.25PhePhe: 3.25 ± 0.0
5.107PheGly: 5.107 ± 0.0
0.929PheHis: 0.929 ± 0.0
1.857PheIle: 1.857 ± 0.0
4.178PheLys: 4.178 ± 0.0
6.035PheLeu: 6.035 ± 0.0
1.393PheMet: 1.393 ± 0.0
3.25PheAsn: 3.25 ± 0.0
2.321PhePro: 2.321 ± 0.0
2.786PheGln: 2.786 ± 0.0
2.786PheArg: 2.786 ± 0.0
3.714PheSer: 3.714 ± 0.0
1.857PheThr: 1.857 ± 0.0
2.786PheVal: 2.786 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.857PheTyr: 1.857 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.857GlyAla: 1.857 ± 0.0
1.393GlyCys: 1.393 ± 0.0
1.857GlyAsp: 1.857 ± 0.0
3.25GlyGlu: 3.25 ± 0.0
2.321GlyPhe: 2.321 ± 0.0
3.25GlyGly: 3.25 ± 0.0
0.464GlyHis: 0.464 ± 0.0
4.643GlyIle: 4.643 ± 0.0
2.786GlyLys: 2.786 ± 0.0
4.178GlyLeu: 4.178 ± 0.0
1.857GlyMet: 1.857 ± 0.0
2.786GlyAsn: 2.786 ± 0.0
4.178GlyPro: 4.178 ± 0.0
3.714GlyGln: 3.714 ± 0.0
2.786GlyArg: 2.786 ± 0.0
3.714GlySer: 3.714 ± 0.0
2.786GlyThr: 2.786 ± 0.0
4.178GlyVal: 4.178 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
2.321GlyTyr: 2.321 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.929HisAla: 0.929 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.929HisAsp: 0.929 ± 0.0
0.929HisGlu: 0.929 ± 0.0
2.786HisPhe: 2.786 ± 0.0
0.464HisGly: 0.464 ± 0.0
0.0HisHis: 0.0 ± 0.0
2.786HisIle: 2.786 ± 0.0
0.464HisLys: 0.464 ± 0.0
0.929HisLeu: 0.929 ± 0.0
1.393HisMet: 1.393 ± 0.0
1.393HisAsn: 1.393 ± 0.0
0.929HisPro: 0.929 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.464HisArg: 0.464 ± 0.0
0.929HisSer: 0.929 ± 0.0
0.929HisThr: 0.929 ± 0.0
0.929HisVal: 0.929 ± 0.0
0.929HisTrp: 0.929 ± 0.0
0.929HisTyr: 0.929 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
1.857IleAla: 1.857 ± 0.0
1.393IleCys: 1.393 ± 0.0
1.857IleAsp: 1.857 ± 0.0
3.25IleGlu: 3.25 ± 0.0
3.714IlePhe: 3.714 ± 0.0
4.643IleGly: 4.643 ± 0.0
1.393IleHis: 1.393 ± 0.0
3.25IleIle: 3.25 ± 0.0
5.571IleLys: 5.571 ± 0.0
6.964IleLeu: 6.964 ± 0.0
1.393IleMet: 1.393 ± 0.0
2.321IleAsn: 2.321 ± 0.0
3.25IlePro: 3.25 ± 0.0
2.321IleGln: 2.321 ± 0.0
2.321IleArg: 2.321 ± 0.0
5.107IleSer: 5.107 ± 0.0
2.786IleThr: 2.786 ± 0.0
1.393IleVal: 1.393 ± 0.0
0.0IleTrp: 0.0 ± 0.0
2.321IleTyr: 2.321 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.178LysAla: 4.178 ± 0.0
0.0LysCys: 0.0 ± 0.0
2.786LysAsp: 2.786 ± 0.0
6.035LysGlu: 6.035 ± 0.0
5.571LysPhe: 5.571 ± 0.0
2.786LysGly: 2.786 ± 0.0
2.321LysHis: 2.321 ± 0.0
4.178LysIle: 4.178 ± 0.0
8.821LysLys: 8.821 ± 0.0
9.749LysLeu: 9.749 ± 0.0
2.321LysMet: 2.321 ± 0.0
0.929LysAsn: 0.929 ± 0.0
3.25LysPro: 3.25 ± 0.0
1.857LysGln: 1.857 ± 0.0
3.714LysArg: 3.714 ± 0.0
6.964LysSer: 6.964 ± 0.0
3.25LysThr: 3.25 ± 0.0
3.25LysVal: 3.25 ± 0.0
0.464LysTrp: 0.464 ± 0.0
1.393LysTyr: 1.393 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.643LeuAla: 4.643 ± 0.0
0.0LeuCys: 0.0 ± 0.0
6.5LeuAsp: 6.5 ± 0.0
6.5LeuGlu: 6.5 ± 0.0
4.643LeuPhe: 4.643 ± 0.0
7.428LeuGly: 7.428 ± 0.0
1.857LeuHis: 1.857 ± 0.0
2.786LeuIle: 2.786 ± 0.0
6.5LeuLys: 6.5 ± 0.0
7.428LeuLeu: 7.428 ± 0.0
1.857LeuMet: 1.857 ± 0.0
5.107LeuAsn: 5.107 ± 0.0
1.393LeuPro: 1.393 ± 0.0
4.178LeuGln: 4.178 ± 0.0
4.643LeuArg: 4.643 ± 0.0
9.285LeuSer: 9.285 ± 0.0
5.107LeuThr: 5.107 ± 0.0
7.428LeuVal: 7.428 ± 0.0
0.464LeuTrp: 0.464 ± 0.0
3.714LeuTyr: 3.714 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.714MetAla: 3.714 ± 0.0
0.929MetCys: 0.929 ± 0.0
2.321MetAsp: 2.321 ± 0.0
1.857MetGlu: 1.857 ± 0.0
0.464MetPhe: 0.464 ± 0.0
0.929MetGly: 0.929 ± 0.0
0.464MetHis: 0.464 ± 0.0
0.929MetIle: 0.929 ± 0.0
2.321MetLys: 2.321 ± 0.0
3.25MetLeu: 3.25 ± 0.0
0.929MetMet: 0.929 ± 0.0
0.464MetAsn: 0.464 ± 0.0
0.929MetPro: 0.929 ± 0.0
1.393MetGln: 1.393 ± 0.0
4.178MetArg: 4.178 ± 0.0
2.786MetSer: 2.786 ± 0.0
3.714MetThr: 3.714 ± 0.0
1.393MetVal: 1.393 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.464MetTyr: 0.464 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.929AsnAla: 0.929 ± 0.0
0.0AsnCys: 0.0 ± 0.0
2.321AsnAsp: 2.321 ± 0.0
4.643AsnGlu: 4.643 ± 0.0
2.321AsnPhe: 2.321 ± 0.0
2.321AsnGly: 2.321 ± 0.0
1.393AsnHis: 1.393 ± 0.0
0.929AsnIle: 0.929 ± 0.0
2.786AsnLys: 2.786 ± 0.0
5.571AsnLeu: 5.571 ± 0.0
0.929AsnMet: 0.929 ± 0.0
0.464AsnAsn: 0.464 ± 0.0
2.321AsnPro: 2.321 ± 0.0
1.393AsnGln: 1.393 ± 0.0
4.643AsnArg: 4.643 ± 0.0
4.643AsnSer: 4.643 ± 0.0
2.321AsnThr: 2.321 ± 0.0
3.714AsnVal: 3.714 ± 0.0
0.464AsnTrp: 0.464 ± 0.0
3.25AsnTyr: 3.25 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.393ProAla: 1.393 ± 0.0
0.464ProCys: 0.464 ± 0.0
1.857ProAsp: 1.857 ± 0.0
5.571ProGlu: 5.571 ± 0.0
1.857ProPhe: 1.857 ± 0.0
3.25ProGly: 3.25 ± 0.0
1.393ProHis: 1.393 ± 0.0
1.857ProIle: 1.857 ± 0.0
2.321ProLys: 2.321 ± 0.0
2.321ProLeu: 2.321 ± 0.0
1.857ProMet: 1.857 ± 0.0
1.857ProAsn: 1.857 ± 0.0
0.929ProPro: 0.929 ± 0.0
1.857ProGln: 1.857 ± 0.0
1.393ProArg: 1.393 ± 0.0
2.786ProSer: 2.786 ± 0.0
1.393ProThr: 1.393 ± 0.0
2.786ProVal: 2.786 ± 0.0
0.464ProTrp: 0.464 ± 0.0
0.929ProTyr: 0.929 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.857GlnAla: 1.857 ± 0.0
0.464GlnCys: 0.464 ± 0.0
3.25GlnAsp: 3.25 ± 0.0
1.393GlnGlu: 1.393 ± 0.0
1.857GlnPhe: 1.857 ± 0.0
2.786GlnGly: 2.786 ± 0.0
0.464GlnHis: 0.464 ± 0.0
2.786GlnIle: 2.786 ± 0.0
3.25GlnLys: 3.25 ± 0.0
3.714GlnLeu: 3.714 ± 0.0
2.786GlnMet: 2.786 ± 0.0
0.929GlnAsn: 0.929 ± 0.0
0.929GlnPro: 0.929 ± 0.0
0.929GlnGln: 0.929 ± 0.0
1.393GlnArg: 1.393 ± 0.0
4.178GlnSer: 4.178 ± 0.0
0.929GlnThr: 0.929 ± 0.0
1.857GlnVal: 1.857 ± 0.0
0.464GlnTrp: 0.464 ± 0.0
0.929GlnTyr: 0.929 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.786ArgAla: 2.786 ± 0.0
0.464ArgCys: 0.464 ± 0.0
2.786ArgAsp: 2.786 ± 0.0
4.643ArgGlu: 4.643 ± 0.0
1.857ArgPhe: 1.857 ± 0.0
2.321ArgGly: 2.321 ± 0.0
1.393ArgHis: 1.393 ± 0.0
3.25ArgIle: 3.25 ± 0.0
2.786ArgLys: 2.786 ± 0.0
4.643ArgLeu: 4.643 ± 0.0
1.857ArgMet: 1.857 ± 0.0
1.857ArgAsn: 1.857 ± 0.0
1.393ArgPro: 1.393 ± 0.0
3.714ArgGln: 3.714 ± 0.0
4.178ArgArg: 4.178 ± 0.0
3.714ArgSer: 3.714 ± 0.0
4.643ArgThr: 4.643 ± 0.0
3.714ArgVal: 3.714 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
1.393ArgTyr: 1.393 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.643SerAla: 4.643 ± 0.0
0.929SerCys: 0.929 ± 0.0
5.571SerAsp: 5.571 ± 0.0
6.5SerGlu: 6.5 ± 0.0
4.643SerPhe: 4.643 ± 0.0
5.571SerGly: 5.571 ± 0.0
0.929SerHis: 0.929 ± 0.0
6.964SerIle: 6.964 ± 0.0
4.643SerLys: 4.643 ± 0.0
7.892SerLeu: 7.892 ± 0.0
2.786SerMet: 2.786 ± 0.0
3.25SerAsn: 3.25 ± 0.0
1.857SerPro: 1.857 ± 0.0
1.857SerGln: 1.857 ± 0.0
2.321SerArg: 2.321 ± 0.0
8.357SerSer: 8.357 ± 0.0
4.643SerThr: 4.643 ± 0.0
5.571SerVal: 5.571 ± 0.0
0.464SerTrp: 0.464 ± 0.0
4.178SerTyr: 4.178 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.786ThrAla: 2.786 ± 0.0
0.929ThrCys: 0.929 ± 0.0
2.321ThrAsp: 2.321 ± 0.0
6.5ThrGlu: 6.5 ± 0.0
1.393ThrPhe: 1.393 ± 0.0
3.25ThrGly: 3.25 ± 0.0
0.0ThrHis: 0.0 ± 0.0
3.714ThrIle: 3.714 ± 0.0
4.178ThrLys: 4.178 ± 0.0
2.321ThrLeu: 2.321 ± 0.0
1.393ThrMet: 1.393 ± 0.0
6.035ThrAsn: 6.035 ± 0.0
0.464ThrPro: 0.464 ± 0.0
1.393ThrGln: 1.393 ± 0.0
1.857ThrArg: 1.857 ± 0.0
5.107ThrSer: 5.107 ± 0.0
4.643ThrThr: 4.643 ± 0.0
2.786ThrVal: 2.786 ± 0.0
1.393ThrTrp: 1.393 ± 0.0
1.857ThrTyr: 1.857 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
1.393ValAla: 1.393 ± 0.0
0.0ValCys: 0.0 ± 0.0
6.035ValAsp: 6.035 ± 0.0
3.714ValGlu: 3.714 ± 0.0
2.786ValPhe: 2.786 ± 0.0
4.643ValGly: 4.643 ± 0.0
1.857ValHis: 1.857 ± 0.0
2.321ValIle: 2.321 ± 0.0
6.5ValLys: 6.5 ± 0.0
4.178ValLeu: 4.178 ± 0.0
1.857ValMet: 1.857 ± 0.0
4.643ValAsn: 4.643 ± 0.0
2.786ValPro: 2.786 ± 0.0
1.857ValGln: 1.857 ± 0.0
4.643ValArg: 4.643 ± 0.0
4.178ValSer: 4.178 ± 0.0
3.714ValThr: 3.714 ± 0.0
2.786ValVal: 2.786 ± 0.0
0.464ValTrp: 0.464 ± 0.0
0.929ValTyr: 0.929 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.393TrpAla: 1.393 ± 0.0
0.929TrpCys: 0.929 ± 0.0
0.464TrpAsp: 0.464 ± 0.0
0.929TrpGlu: 0.929 ± 0.0
0.464TrpPhe: 0.464 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.464TrpIle: 0.464 ± 0.0
0.464TrpLys: 0.464 ± 0.0
0.929TrpLeu: 0.929 ± 0.0
0.464TrpMet: 0.464 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.464TrpPro: 0.464 ± 0.0
0.929TrpGln: 0.929 ± 0.0
0.929TrpArg: 0.929 ± 0.0
0.929TrpSer: 0.929 ± 0.0
0.929TrpThr: 0.929 ± 0.0
0.929TrpVal: 0.929 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.464TyrAla: 0.464 ± 0.0
0.0TyrCys: 0.0 ± 0.0
3.25TyrAsp: 3.25 ± 0.0
2.321TyrGlu: 2.321 ± 0.0
1.857TyrPhe: 1.857 ± 0.0
0.464TyrGly: 0.464 ± 0.0
0.0TyrHis: 0.0 ± 0.0
1.857TyrIle: 1.857 ± 0.0
2.321TyrLys: 2.321 ± 0.0
2.786TyrLeu: 2.786 ± 0.0
1.857TyrMet: 1.857 ± 0.0
4.178TyrAsn: 4.178 ± 0.0
1.857TyrPro: 1.857 ± 0.0
0.929TyrGln: 0.929 ± 0.0
0.929TyrArg: 0.929 ± 0.0
1.857TyrSer: 1.857 ± 0.0
1.857TyrThr: 1.857 ± 0.0
3.25TyrVal: 3.25 ± 0.0
0.929TyrTrp: 0.929 ± 0.0
0.929TyrTyr: 0.929 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2155 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski