Meles meles circovirus-like virus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G9LQV7|G9LQV7_9CIRC Capsid protein OS=Meles meles circovirus-like virus OX=1128073 PE=4 SV=1
MM1 pKa = 7.24ATRR4 pKa = 11.84PEE6 pKa = 3.99ALHH9 pKa = 6.26WCFTLNNPTIDD20 pKa = 3.53EE21 pKa = 4.03QQIIDD26 pKa = 3.84EE27 pKa = 4.48LEE29 pKa = 3.94EE30 pKa = 3.99FGIEE34 pKa = 3.99YY35 pKa = 10.58AVFQLEE41 pKa = 4.15EE42 pKa = 4.56GEE44 pKa = 4.35NNTPHH49 pKa = 5.72FQGYY53 pKa = 8.35VALTVKK59 pKa = 10.31KK60 pKa = 10.19RR61 pKa = 11.84LTAVRR66 pKa = 11.84TLFGGVAHH74 pKa = 6.82WEE76 pKa = 4.18ICRR79 pKa = 11.84GTPTQNRR86 pKa = 11.84DD87 pKa = 3.08YY88 pKa = 9.93CTKK91 pKa = 10.43ADD93 pKa = 3.59TRR95 pKa = 11.84IGDD98 pKa = 3.7FVEE101 pKa = 4.93IGTLPAPKK109 pKa = 10.04GARR112 pKa = 11.84QDD114 pKa = 3.96LVQLHH119 pKa = 6.25SALKK123 pKa = 10.71DD124 pKa = 3.31GLTQAQYY131 pKa = 11.02VDD133 pKa = 3.44QFFSIFVRR141 pKa = 11.84HH142 pKa = 6.35PNLVSNYY149 pKa = 7.54VAATISEE156 pKa = 4.33RR157 pKa = 11.84DD158 pKa = 3.27PANPVSTWLLIGTPGTGKK176 pKa = 10.26SRR178 pKa = 11.84LARR181 pKa = 11.84AIGKK185 pKa = 8.76NLGDD189 pKa = 3.56GAIFEE194 pKa = 4.64HH195 pKa = 7.27SLGKK199 pKa = 9.81WFDD202 pKa = 3.74GYY204 pKa = 11.03VGQRR208 pKa = 11.84TVLFDD213 pKa = 4.08DD214 pKa = 4.8FCGSSLPFSQFKK226 pKa = 10.17RR227 pKa = 11.84ICDD230 pKa = 3.78RR231 pKa = 11.84YY232 pKa = 8.76PVRR235 pKa = 11.84VEE237 pKa = 4.87LKK239 pKa = 10.74GLSCPMAATNFLITTNQDD257 pKa = 2.68PKK259 pKa = 10.37TWWKK263 pKa = 11.3DD264 pKa = 3.42EE265 pKa = 3.83VTGQHH270 pKa = 4.7GHH272 pKa = 5.92AAITRR277 pKa = 11.84RR278 pKa = 11.84IGRR281 pKa = 11.84VLFFFAEE288 pKa = 4.24NTFRR292 pKa = 11.84SYY294 pKa = 11.23PSYY297 pKa = 10.87NHH299 pKa = 6.47YY300 pKa = 9.95ATDD303 pKa = 3.84CLRR306 pKa = 11.84PRR308 pKa = 11.84IDD310 pKa = 3.42GEE312 pKa = 4.45TYY314 pKa = 10.11HH315 pKa = 6.35YY316 pKa = 9.82FSPAQTIVYY325 pKa = 8.47DD326 pKa = 4.01AQGEE330 pKa = 4.47AILPPEE336 pKa = 4.14ILRR339 pKa = 11.84AEE341 pKa = 4.38VQQ343 pKa = 3.11

Molecular weight: 38.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G9LQV7|G9LQV7_9CIRC Capsid protein OS=Meles meles circovirus-like virus OX=1128073 PE=4 SV=1
MM1 pKa = 7.47GRR3 pKa = 11.84RR4 pKa = 11.84ITTFRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84SSTMRR18 pKa = 11.84KK19 pKa = 9.1ARR21 pKa = 11.84PSYY24 pKa = 10.06RR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84SSARR31 pKa = 11.84KK32 pKa = 7.87YY33 pKa = 9.04SKK35 pKa = 10.13KK36 pKa = 9.68RR37 pKa = 11.84RR38 pKa = 11.84SRR40 pKa = 11.84GMQRR44 pKa = 11.84IKK46 pKa = 9.78TSRR49 pKa = 11.84WPVRR53 pKa = 11.84NIGGDD58 pKa = 3.11RR59 pKa = 11.84SFCKK63 pKa = 10.12LRR65 pKa = 11.84YY66 pKa = 9.02VKK68 pKa = 10.66GSAFDD73 pKa = 3.58IPEE76 pKa = 4.34GAASLSQLQVMNVGAYY92 pKa = 9.27PGASNLLQSMTLNGVMGEE110 pKa = 4.3TPNLSTMGALYY121 pKa = 9.48TRR123 pKa = 11.84YY124 pKa = 9.87RR125 pKa = 11.84IRR127 pKa = 11.84GIKK130 pKa = 9.28IRR132 pKa = 11.84LTYY135 pKa = 8.28WQLGGAPVILFTNAAPDD152 pKa = 3.82VNNLTVASTGPNPAFITPNITTTTEE177 pKa = 3.89QRR179 pKa = 11.84WAKK182 pKa = 10.51YY183 pKa = 9.36RR184 pKa = 11.84VCQATANGGKK194 pKa = 8.19ATSVSAYY201 pKa = 9.28YY202 pKa = 10.34SVNRR206 pKa = 11.84VQGPDD211 pKa = 3.27TIVRR215 pKa = 11.84NDD217 pKa = 3.42RR218 pKa = 11.84DD219 pKa = 3.93YY220 pKa = 11.31TGEE223 pKa = 4.03MQPATPYY230 pKa = 9.53FANSSGVADD239 pKa = 4.39TPQFSPWMQWGIATLSGTPAVAGTQGVIKK268 pKa = 10.64VEE270 pKa = 3.8QTVYY274 pKa = 11.2CEE276 pKa = 4.08FFGKK280 pKa = 10.49RR281 pKa = 11.84IQTQQ285 pKa = 2.83

Molecular weight: 31.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

628

285

343

314.0

35.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.121 ± 0.182

1.592 ± 0.328

4.14 ± 1.023

4.14 ± 1.236

4.777 ± 0.983

8.121 ± 0.395

1.592 ± 0.967

5.414 ± 0.305

3.822 ± 0.236

6.369 ± 1.098

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.752 ± 0.854

4.299 ± 0.372

5.573 ± 0.025

5.096 ± 0.102

8.439 ± 1.48

5.892 ± 1.323

8.917 ± 0.551

6.051 ± 0.161

1.752 ± 0.002

4.14 ± 0.256
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski