Sanguibacter antarcticus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Sanguibacteraceae; Sanguibacter

Average proteome isoelectric point is 5.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3108 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2A9E8J7|A0A2A9E8J7_9MICO Two-component system sensor histidine kinase SenX3 OS=Sanguibacter antarcticus OX=372484 GN=ATL42_3210 PE=4 SV=1
MM1 pKa = 7.79EE2 pKa = 4.89SMKK5 pKa = 10.67HH6 pKa = 3.9STTPRR11 pKa = 11.84RR12 pKa = 11.84VLHH15 pKa = 6.06ALCLGSLVLALTACEE30 pKa = 4.11DD31 pKa = 3.38VRR33 pKa = 11.84AIPWPAAGTGTATDD47 pKa = 3.81SATADD52 pKa = 3.56ATPEE56 pKa = 3.96PSPVQSADD64 pKa = 3.36LEE66 pKa = 4.39ATTDD70 pKa = 3.29EE71 pKa = 4.67GTAEE75 pKa = 4.14PVEE78 pKa = 4.41VAVPDD83 pKa = 4.12DD84 pKa = 4.03VVPAPVPAALPEE96 pKa = 4.22DD97 pKa = 4.11VVPDD101 pKa = 3.91EE102 pKa = 4.87AAPAEE107 pKa = 4.24PVVVEE112 pKa = 4.64PVATAEE118 pKa = 4.43VVVSAAYY125 pKa = 9.65PDD127 pKa = 4.42DD128 pKa = 4.47AVGDD132 pKa = 3.98YY133 pKa = 10.79QLGGSYY139 pKa = 9.48TPPAGVNLVVRR150 pKa = 11.84DD151 pKa = 4.13STSKK155 pKa = 10.21PAPGLYY161 pKa = 9.99NICYY165 pKa = 9.9INGFQTQSDD174 pKa = 4.65DD175 pKa = 3.32SDD177 pKa = 3.46AWLKK181 pKa = 10.45DD182 pKa = 3.2HH183 pKa = 7.52PEE185 pKa = 4.05LVLHH189 pKa = 6.71VDD191 pKa = 4.33GEE193 pKa = 4.61PVADD197 pKa = 4.46PGWPDD202 pKa = 3.32EE203 pKa = 4.09YY204 pKa = 11.5LLDD207 pKa = 3.49VSTAAKK213 pKa = 8.24RR214 pKa = 11.84TAIADD219 pKa = 3.36IMAVTMTSCADD230 pKa = 3.19KK231 pKa = 11.2GFDD234 pKa = 5.01AIEE237 pKa = 4.05FDD239 pKa = 4.58NLDD242 pKa = 3.44SYY244 pKa = 11.5LRR246 pKa = 11.84SDD248 pKa = 4.29DD249 pKa = 5.19ALDD252 pKa = 3.82IDD254 pKa = 5.15DD255 pKa = 5.02AVATARR261 pKa = 11.84LYY263 pKa = 9.57TEE265 pKa = 4.81RR266 pKa = 11.84GHH268 pKa = 7.53ALGLEE273 pKa = 4.33VGQKK277 pKa = 8.16NTAEE281 pKa = 4.16LGSRR285 pKa = 11.84GRR287 pKa = 11.84DD288 pKa = 3.05EE289 pKa = 4.61VGFDD293 pKa = 3.04FAIAEE298 pKa = 4.12EE299 pKa = 4.33CGVYY303 pKa = 9.88EE304 pKa = 4.28EE305 pKa = 5.57CSDD308 pKa = 3.72FTDD311 pKa = 3.66VYY313 pKa = 10.14GSHH316 pKa = 6.18VFAIEE321 pKa = 3.89YY322 pKa = 10.41PEE324 pKa = 6.13DD325 pKa = 3.68GDD327 pKa = 4.16FAEE330 pKa = 5.29SCASPGRR337 pKa = 11.84PDD339 pKa = 4.29NMILRR344 pKa = 11.84DD345 pKa = 4.09LDD347 pKa = 4.07LVTPSDD353 pKa = 3.11SDD355 pKa = 3.76YY356 pKa = 11.52VYY358 pKa = 10.73EE359 pKa = 4.18RR360 pKa = 11.84CC361 pKa = 4.98

Molecular weight: 38.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2A9E3D3|A0A2A9E3D3_9MICO Ribosomal silencing factor RsfS OS=Sanguibacter antarcticus OX=372484 GN=rsfS PE=3 SV=1
MM1 pKa = 7.96PSPLLRR7 pKa = 11.84LARR10 pKa = 11.84SASRR14 pKa = 11.84QHH16 pKa = 5.82STSSPSSPRR25 pKa = 11.84LRR27 pKa = 11.84PSPPSPPSVAVRR39 pKa = 11.84RR40 pKa = 11.84PPDD43 pKa = 4.07GPPPAPQFSTPLCPTRR59 pKa = 11.84SSPPPQRR66 pKa = 11.84RR67 pKa = 11.84PALPRR72 pKa = 11.84PTRR75 pKa = 11.84SGPRR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84AAAGHH86 pKa = 5.53EE87 pKa = 4.02RR88 pKa = 11.84RR89 pKa = 11.84ARR91 pKa = 11.84RR92 pKa = 11.84PGTPRR97 pKa = 11.84RR98 pKa = 11.84LTTTRR103 pKa = 11.84LPRR106 pKa = 11.84STWSPLSRR114 pKa = 11.84RR115 pKa = 11.84SHH117 pKa = 6.5HH118 pKa = 6.28GRR120 pKa = 11.84LPTTPLHH127 pKa = 6.63SPLAHH132 pKa = 6.98AGHH135 pKa = 7.32AVQAARR141 pKa = 11.84RR142 pKa = 11.84ARR144 pKa = 11.84PPSRR148 pKa = 11.84RR149 pKa = 11.84LHH151 pKa = 6.42RR152 pKa = 11.84AFQRR156 pKa = 11.84HH157 pKa = 5.07RR158 pKa = 11.84ALRR161 pKa = 11.84WLLLSRR167 pKa = 11.84LSSSSRR173 pKa = 11.84LSRR176 pKa = 11.84RR177 pKa = 11.84RR178 pKa = 11.84PLSRR182 pKa = 11.84RR183 pKa = 11.84SPASRR188 pKa = 11.84VARR191 pKa = 11.84PAPGGAVEE199 pKa = 4.25PRR201 pKa = 11.84ARR203 pKa = 11.84PARR206 pKa = 11.84RR207 pKa = 11.84RR208 pKa = 11.84PRR210 pKa = 11.84PPPSPRR216 pKa = 11.84APLRR220 pKa = 11.84SPNRR224 pKa = 11.84TVHH227 pKa = 6.04RR228 pKa = 11.84MLRR231 pKa = 11.84RR232 pKa = 11.84RR233 pKa = 11.84RR234 pKa = 11.84PTPGQMLQGAPRR246 pKa = 11.84PQRR249 pKa = 11.84ALQTQTALLLQRR261 pKa = 11.84SLRR264 pKa = 11.84PHH266 pKa = 6.07ARR268 pKa = 11.84AGRR271 pKa = 11.84GG272 pKa = 3.2

Molecular weight: 30.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3108

0

3108

1047096

30

2351

336.9

35.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.362 ± 0.064

0.625 ± 0.011

6.428 ± 0.038

5.43 ± 0.036

2.699 ± 0.028

8.915 ± 0.037

2.121 ± 0.023

3.732 ± 0.035

1.681 ± 0.032

10.183 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.769 ± 0.019

1.709 ± 0.024

5.499 ± 0.033

2.739 ± 0.024

7.15 ± 0.046

6.024 ± 0.034

6.789 ± 0.044

9.859 ± 0.048

1.419 ± 0.018

1.868 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski