Amino acid dipepetide frequency for Mizyes virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
10.704AlaAla: 10.704 ± 0.0
0.563AlaCys: 0.563 ± 0.0
5.634AlaAsp: 5.634 ± 0.0
5.07AlaGlu: 5.07 ± 0.0
3.944AlaPhe: 3.944 ± 0.0
6.197AlaGly: 6.197 ± 0.0
1.69AlaHis: 1.69 ± 0.0
5.634AlaIle: 5.634 ± 0.0
2.254AlaLys: 2.254 ± 0.0
6.197AlaLeu: 6.197 ± 0.0
3.38AlaMet: 3.38 ± 0.0
2.817AlaAsn: 2.817 ± 0.0
3.38AlaPro: 3.38 ± 0.0
1.69AlaGln: 1.69 ± 0.0
3.38AlaArg: 3.38 ± 0.0
7.887AlaSer: 7.887 ± 0.0
3.38AlaThr: 3.38 ± 0.0
10.141AlaVal: 10.141 ± 0.0
0.563AlaTrp: 0.563 ± 0.0
2.254AlaTyr: 2.254 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.69CysAla: 1.69 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.127CysAsp: 1.127 ± 0.0
1.69CysGlu: 1.69 ± 0.0
1.127CysPhe: 1.127 ± 0.0
1.127CysGly: 1.127 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.563CysIle: 0.563 ± 0.0
0.563CysLys: 0.563 ± 0.0
2.254CysLeu: 2.254 ± 0.0
0.563CysMet: 0.563 ± 0.0
0.563CysAsn: 0.563 ± 0.0
0.563CysPro: 0.563 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.69CysSer: 1.69 ± 0.0
2.254CysThr: 2.254 ± 0.0
1.127CysVal: 1.127 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.127CysTyr: 1.127 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
7.887AspAla: 7.887 ± 0.0
1.69AspCys: 1.69 ± 0.0
3.944AspAsp: 3.944 ± 0.0
5.07AspGlu: 5.07 ± 0.0
6.197AspPhe: 6.197 ± 0.0
3.944AspGly: 3.944 ± 0.0
1.127AspHis: 1.127 ± 0.0
2.254AspIle: 2.254 ± 0.0
2.254AspLys: 2.254 ± 0.0
2.254AspLeu: 2.254 ± 0.0
1.69AspMet: 1.69 ± 0.0
2.254AspAsn: 2.254 ± 0.0
3.944AspPro: 3.944 ± 0.0
1.127AspGln: 1.127 ± 0.0
4.507AspArg: 4.507 ± 0.0
3.944AspSer: 3.944 ± 0.0
3.38AspThr: 3.38 ± 0.0
4.507AspVal: 4.507 ± 0.0
0.563AspTrp: 0.563 ± 0.0
4.507AspTyr: 4.507 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.817GluAla: 2.817 ± 0.0
0.563GluCys: 0.563 ± 0.0
2.254GluAsp: 2.254 ± 0.0
2.817GluGlu: 2.817 ± 0.0
3.944GluPhe: 3.944 ± 0.0
2.817GluGly: 2.817 ± 0.0
2.817GluHis: 2.817 ± 0.0
1.127GluIle: 1.127 ± 0.0
2.817GluLys: 2.817 ± 0.0
8.451GluLeu: 8.451 ± 0.0
2.817GluMet: 2.817 ± 0.0
1.69GluAsn: 1.69 ± 0.0
2.254GluPro: 2.254 ± 0.0
0.563GluGln: 0.563 ± 0.0
3.38GluArg: 3.38 ± 0.0
0.563GluSer: 0.563 ± 0.0
2.817GluThr: 2.817 ± 0.0
2.817GluVal: 2.817 ± 0.0
1.127GluTrp: 1.127 ± 0.0
1.69GluTyr: 1.69 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.254PheAla: 2.254 ± 0.0
1.127PheCys: 1.127 ± 0.0
2.817PheAsp: 2.817 ± 0.0
2.817PheGlu: 2.817 ± 0.0
3.944PhePhe: 3.944 ± 0.0
1.127PheGly: 1.127 ± 0.0
0.563PheHis: 0.563 ± 0.0
0.563PheIle: 0.563 ± 0.0
2.817PheLys: 2.817 ± 0.0
5.634PheLeu: 5.634 ± 0.0
0.563PheMet: 0.563 ± 0.0
2.817PheAsn: 2.817 ± 0.0
4.507PhePro: 4.507 ± 0.0
1.127PheGln: 1.127 ± 0.0
3.38PheArg: 3.38 ± 0.0
5.634PheSer: 5.634 ± 0.0
5.07PheThr: 5.07 ± 0.0
2.254PheVal: 2.254 ± 0.0
0.563PheTrp: 0.563 ± 0.0
3.38PheTyr: 3.38 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.944GlyAla: 3.944 ± 0.0
0.563GlyCys: 0.563 ± 0.0
3.38GlyAsp: 3.38 ± 0.0
0.563GlyGlu: 0.563 ± 0.0
5.07GlyPhe: 5.07 ± 0.0
2.254GlyGly: 2.254 ± 0.0
1.127GlyHis: 1.127 ± 0.0
6.197GlyIle: 6.197 ± 0.0
5.07GlyLys: 5.07 ± 0.0
3.38GlyLeu: 3.38 ± 0.0
1.127GlyMet: 1.127 ± 0.0
1.127GlyAsn: 1.127 ± 0.0
2.254GlyPro: 2.254 ± 0.0
2.254GlyGln: 2.254 ± 0.0
2.254GlyArg: 2.254 ± 0.0
6.761GlySer: 6.761 ± 0.0
2.254GlyThr: 2.254 ± 0.0
5.634GlyVal: 5.634 ± 0.0
0.563GlyTrp: 0.563 ± 0.0
0.563GlyTyr: 0.563 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.817HisAla: 2.817 ± 0.0
0.563HisCys: 0.563 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.127HisGlu: 1.127 ± 0.0
0.563HisPhe: 0.563 ± 0.0
1.69HisGly: 1.69 ± 0.0
0.563HisHis: 0.563 ± 0.0
1.69HisIle: 1.69 ± 0.0
1.127HisLys: 1.127 ± 0.0
1.69HisLeu: 1.69 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.127HisAsn: 1.127 ± 0.0
0.563HisPro: 0.563 ± 0.0
1.127HisGln: 1.127 ± 0.0
0.563HisArg: 0.563 ± 0.0
3.38HisSer: 3.38 ± 0.0
1.127HisThr: 1.127 ± 0.0
2.817HisVal: 2.817 ± 0.0
1.127HisTrp: 1.127 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
7.324IleAla: 7.324 ± 0.0
1.127IleCys: 1.127 ± 0.0
2.817IleAsp: 2.817 ± 0.0
2.254IleGlu: 2.254 ± 0.0
0.563IlePhe: 0.563 ± 0.0
3.944IleGly: 3.944 ± 0.0
1.127IleHis: 1.127 ± 0.0
1.69IleIle: 1.69 ± 0.0
2.254IleLys: 2.254 ± 0.0
2.254IleLeu: 2.254 ± 0.0
1.69IleMet: 1.69 ± 0.0
3.944IleAsn: 3.944 ± 0.0
1.69IlePro: 1.69 ± 0.0
2.254IleGln: 2.254 ± 0.0
1.69IleArg: 1.69 ± 0.0
7.887IleSer: 7.887 ± 0.0
1.127IleThr: 1.127 ± 0.0
2.817IleVal: 2.817 ± 0.0
1.127IleTrp: 1.127 ± 0.0
2.817IleTyr: 2.817 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.944LysAla: 3.944 ± 0.0
0.563LysCys: 0.563 ± 0.0
4.507LysAsp: 4.507 ± 0.0
2.254LysGlu: 2.254 ± 0.0
2.817LysPhe: 2.817 ± 0.0
2.817LysGly: 2.817 ± 0.0
0.563LysHis: 0.563 ± 0.0
0.563LysIle: 0.563 ± 0.0
2.254LysLys: 2.254 ± 0.0
3.38LysLeu: 3.38 ± 0.0
2.254LysMet: 2.254 ± 0.0
0.563LysAsn: 0.563 ± 0.0
1.127LysPro: 1.127 ± 0.0
1.127LysGln: 1.127 ± 0.0
1.127LysArg: 1.127 ± 0.0
5.634LysSer: 5.634 ± 0.0
2.254LysThr: 2.254 ± 0.0
2.817LysVal: 2.817 ± 0.0
1.127LysTrp: 1.127 ± 0.0
2.254LysTyr: 2.254 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.887LeuAla: 7.887 ± 0.0
1.127LeuCys: 1.127 ± 0.0
5.634LeuAsp: 5.634 ± 0.0
1.127LeuGlu: 1.127 ± 0.0
5.07LeuPhe: 5.07 ± 0.0
4.507LeuGly: 4.507 ± 0.0
1.127LeuHis: 1.127 ± 0.0
4.507LeuIle: 4.507 ± 0.0
4.507LeuLys: 4.507 ± 0.0
9.014LeuLeu: 9.014 ± 0.0
1.127LeuMet: 1.127 ± 0.0
1.127LeuAsn: 1.127 ± 0.0
4.507LeuPro: 4.507 ± 0.0
3.38LeuGln: 3.38 ± 0.0
5.634LeuArg: 5.634 ± 0.0
9.014LeuSer: 9.014 ± 0.0
4.507LeuThr: 4.507 ± 0.0
2.817LeuVal: 2.817 ± 0.0
0.0LeuTrp: 0.0 ± 0.0
1.69LeuTyr: 1.69 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.127MetAla: 1.127 ± 0.0
1.127MetCys: 1.127 ± 0.0
0.563MetAsp: 0.563 ± 0.0
0.0MetGlu: 0.0 ± 0.0
1.127MetPhe: 1.127 ± 0.0
3.38MetGly: 3.38 ± 0.0
0.563MetHis: 0.563 ± 0.0
2.254MetIle: 2.254 ± 0.0
1.69MetLys: 1.69 ± 0.0
1.69MetLeu: 1.69 ± 0.0
0.563MetMet: 0.563 ± 0.0
1.127MetAsn: 1.127 ± 0.0
0.0MetPro: 0.0 ± 0.0
0.0MetGln: 0.0 ± 0.0
1.69MetArg: 1.69 ± 0.0
2.254MetSer: 2.254 ± 0.0
2.254MetThr: 2.254 ± 0.0
2.817MetVal: 2.817 ± 0.0
0.563MetTrp: 0.563 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.563AsnAla: 0.563 ± 0.0
1.127AsnCys: 1.127 ± 0.0
2.254AsnAsp: 2.254 ± 0.0
2.817AsnGlu: 2.817 ± 0.0
3.38AsnPhe: 3.38 ± 0.0
2.254AsnGly: 2.254 ± 0.0
1.69AsnHis: 1.69 ± 0.0
1.69AsnIle: 1.69 ± 0.0
0.0AsnLys: 0.0 ± 0.0
1.69AsnLeu: 1.69 ± 0.0
1.127AsnMet: 1.127 ± 0.0
1.69AsnAsn: 1.69 ± 0.0
3.38AsnPro: 3.38 ± 0.0
1.127AsnGln: 1.127 ± 0.0
2.254AsnArg: 2.254 ± 0.0
3.38AsnSer: 3.38 ± 0.0
2.254AsnThr: 2.254 ± 0.0
1.127AsnVal: 1.127 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
1.69AsnTyr: 1.69 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
5.07ProAla: 5.07 ± 0.0
1.127ProCys: 1.127 ± 0.0
6.761ProAsp: 6.761 ± 0.0
3.944ProGlu: 3.944 ± 0.0
1.69ProPhe: 1.69 ± 0.0
1.69ProGly: 1.69 ± 0.0
1.127ProHis: 1.127 ± 0.0
2.254ProIle: 2.254 ± 0.0
1.127ProLys: 1.127 ± 0.0
5.634ProLeu: 5.634 ± 0.0
0.0ProMet: 0.0 ± 0.0
1.69ProAsn: 1.69 ± 0.0
2.254ProPro: 2.254 ± 0.0
1.127ProGln: 1.127 ± 0.0
1.69ProArg: 1.69 ± 0.0
4.507ProSer: 4.507 ± 0.0
1.69ProThr: 1.69 ± 0.0
2.817ProVal: 2.817 ± 0.0
1.127ProTrp: 1.127 ± 0.0
1.69ProTyr: 1.69 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.254GlnAla: 2.254 ± 0.0
1.127GlnCys: 1.127 ± 0.0
1.127GlnAsp: 1.127 ± 0.0
2.254GlnGlu: 2.254 ± 0.0
1.127GlnPhe: 1.127 ± 0.0
1.127GlnGly: 1.127 ± 0.0
1.127GlnHis: 1.127 ± 0.0
1.69GlnIle: 1.69 ± 0.0
0.0GlnLys: 0.0 ± 0.0
1.69GlnLeu: 1.69 ± 0.0
1.69GlnMet: 1.69 ± 0.0
0.563GlnAsn: 0.563 ± 0.0
1.69GlnPro: 1.69 ± 0.0
1.69GlnGln: 1.69 ± 0.0
2.817GlnArg: 2.817 ± 0.0
3.38GlnSer: 3.38 ± 0.0
0.0GlnThr: 0.0 ± 0.0
2.254GlnVal: 2.254 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
1.69GlnTyr: 1.69 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.254ArgAla: 2.254 ± 0.0
1.127ArgCys: 1.127 ± 0.0
4.507ArgAsp: 4.507 ± 0.0
2.254ArgGlu: 2.254 ± 0.0
0.0ArgPhe: 0.0 ± 0.0
3.944ArgGly: 3.944 ± 0.0
1.127ArgHis: 1.127 ± 0.0
2.254ArgIle: 2.254 ± 0.0
5.07ArgLys: 5.07 ± 0.0
3.38ArgLeu: 3.38 ± 0.0
0.563ArgMet: 0.563 ± 0.0
2.817ArgAsn: 2.817 ± 0.0
2.254ArgPro: 2.254 ± 0.0
2.817ArgGln: 2.817 ± 0.0
3.944ArgArg: 3.944 ± 0.0
2.817ArgSer: 2.817 ± 0.0
7.324ArgThr: 7.324 ± 0.0
3.38ArgVal: 3.38 ± 0.0
1.127ArgTrp: 1.127 ± 0.0
2.817ArgTyr: 2.817 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
8.451SerAla: 8.451 ± 0.0
0.563SerCys: 0.563 ± 0.0
6.761SerAsp: 6.761 ± 0.0
7.887SerGlu: 7.887 ± 0.0
5.07SerPhe: 5.07 ± 0.0
3.38SerGly: 3.38 ± 0.0
2.254SerHis: 2.254 ± 0.0
5.634SerIle: 5.634 ± 0.0
4.507SerLys: 4.507 ± 0.0
7.887SerLeu: 7.887 ± 0.0
1.127SerMet: 1.127 ± 0.0
2.817SerAsn: 2.817 ± 0.0
6.761SerPro: 6.761 ± 0.0
1.69SerGln: 1.69 ± 0.0
2.817SerArg: 2.817 ± 0.0
7.887SerSer: 7.887 ± 0.0
6.761SerThr: 6.761 ± 0.0
9.014SerVal: 9.014 ± 0.0
0.563SerTrp: 0.563 ± 0.0
2.817SerTyr: 2.817 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.07ThrAla: 5.07 ± 0.0
2.254ThrCys: 2.254 ± 0.0
6.197ThrAsp: 6.197 ± 0.0
1.127ThrGlu: 1.127 ± 0.0
3.38ThrPhe: 3.38 ± 0.0
4.507ThrGly: 4.507 ± 0.0
2.254ThrHis: 2.254 ± 0.0
3.944ThrIle: 3.944 ± 0.0
1.127ThrLys: 1.127 ± 0.0
6.197ThrLeu: 6.197 ± 0.0
1.127ThrMet: 1.127 ± 0.0
1.69ThrAsn: 1.69 ± 0.0
2.817ThrPro: 2.817 ± 0.0
1.69ThrGln: 1.69 ± 0.0
4.507ThrArg: 4.507 ± 0.0
3.944ThrSer: 3.944 ± 0.0
2.254ThrThr: 2.254 ± 0.0
2.254ThrVal: 2.254 ± 0.0
0.563ThrTrp: 0.563 ± 0.0
3.38ThrTyr: 3.38 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.761ValAla: 6.761 ± 0.0
1.127ValCys: 1.127 ± 0.0
4.507ValAsp: 4.507 ± 0.0
2.254ValGlu: 2.254 ± 0.0
2.254ValPhe: 2.254 ± 0.0
3.38ValGly: 3.38 ± 0.0
1.127ValHis: 1.127 ± 0.0
3.944ValIle: 3.944 ± 0.0
2.817ValLys: 2.817 ± 0.0
2.817ValLeu: 2.817 ± 0.0
1.69ValMet: 1.69 ± 0.0
2.254ValAsn: 2.254 ± 0.0
3.944ValPro: 3.944 ± 0.0
2.254ValGln: 2.254 ± 0.0
6.761ValArg: 6.761 ± 0.0
9.014ValSer: 9.014 ± 0.0
3.38ValThr: 3.38 ± 0.0
6.197ValVal: 6.197 ± 0.0
1.69ValTrp: 1.69 ± 0.0
2.254ValTyr: 2.254 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.563TrpAla: 0.563 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.563TrpAsp: 0.563 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.563TrpGly: 0.563 ± 0.0
0.563TrpHis: 0.563 ± 0.0
1.69TrpIle: 1.69 ± 0.0
0.0TrpLys: 0.0 ± 0.0
1.127TrpLeu: 1.127 ± 0.0
0.563TrpMet: 0.563 ± 0.0
1.127TrpAsn: 1.127 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.127TrpArg: 1.127 ± 0.0
1.127TrpSer: 1.127 ± 0.0
2.817TrpThr: 2.817 ± 0.0
0.563TrpVal: 0.563 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.38TyrAla: 3.38 ± 0.0
0.563TyrCys: 0.563 ± 0.0
1.69TyrAsp: 1.69 ± 0.0
2.817TyrGlu: 2.817 ± 0.0
1.69TyrPhe: 1.69 ± 0.0
1.69TyrGly: 1.69 ± 0.0
1.127TyrHis: 1.127 ± 0.0
2.254TyrIle: 2.254 ± 0.0
1.69TyrLys: 1.69 ± 0.0
2.254TyrLeu: 2.254 ± 0.0
0.563TyrMet: 0.563 ± 0.0
1.69TyrAsn: 1.69 ± 0.0
1.127TyrPro: 1.127 ± 0.0
2.254TyrGln: 2.254 ± 0.0
2.254TyrArg: 2.254 ± 0.0
3.944TyrSer: 3.944 ± 0.0
3.38TyrThr: 3.38 ± 0.0
2.254TyrVal: 2.254 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
1.69TyrTyr: 1.69 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1776 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski