Tortoise microvirus 86

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FW16|A0A4V1FW16_9VIRU Uncharacterized protein OS=Tortoise microvirus 86 OX=2583194 PE=4 SV=1
MM1 pKa = 7.12QCACHH6 pKa = 5.19GTAYY10 pKa = 11.15LMAFNSTWQDD20 pKa = 2.22IGYY23 pKa = 9.14RR24 pKa = 11.84GAMANSPQGEE34 pKa = 4.48TCLGGSGGSEE44 pKa = 3.47PHH46 pKa = 6.53ALISLDD52 pKa = 3.36ILVLIDD58 pKa = 3.44TKK60 pKa = 10.08YY61 pKa = 10.79KK62 pKa = 10.52CVAICC67 pKa = 4.53

Molecular weight: 7.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7U1|A0A4P8W7U1_9VIRU Major capsid protein OS=Tortoise microvirus 86 OX=2583194 PE=3 SV=1
MM1 pKa = 7.5RR2 pKa = 11.84RR3 pKa = 11.84SNNWQFRR10 pKa = 11.84LLQQEE15 pKa = 4.22KK16 pKa = 9.38VAASASFVTLTYY28 pKa = 10.07NTDD31 pKa = 3.59TVPLSPRR38 pKa = 11.84GYY40 pKa = 7.82MTLCKK45 pKa = 9.71RR46 pKa = 11.84DD47 pKa = 3.36FQLFMKK53 pKa = 10.57RR54 pKa = 11.84LRR56 pKa = 11.84KK57 pKa = 9.52LHH59 pKa = 6.15AKK61 pKa = 8.83NVKK64 pKa = 9.07LRR66 pKa = 11.84YY67 pKa = 8.75YY68 pKa = 10.98AVGEE72 pKa = 4.24YY73 pKa = 10.57GSKK76 pKa = 8.61TFRR79 pKa = 11.84PHH81 pKa = 4.72FHH83 pKa = 7.16AIIYY87 pKa = 10.44DD88 pKa = 3.95LDD90 pKa = 3.89RR91 pKa = 11.84EE92 pKa = 4.28KK93 pKa = 10.94LAEE96 pKa = 3.75AWQNGDD102 pKa = 3.52CHH104 pKa = 7.98IGDD107 pKa = 3.51VSGASIAYY115 pKa = 5.6TVKK118 pKa = 10.53YY119 pKa = 6.83MHH121 pKa = 7.07KK122 pKa = 10.21GKK124 pKa = 10.14IIPMHH129 pKa = 6.66RR130 pKa = 11.84NDD132 pKa = 3.78DD133 pKa = 4.48RR134 pKa = 11.84IPEE137 pKa = 4.17FSLMSKK143 pKa = 10.71GLGKK147 pKa = 10.45NYY149 pKa = 7.28MTPQMVNYY157 pKa = 9.21HH158 pKa = 6.38KK159 pKa = 10.91EE160 pKa = 4.36DD161 pKa = 2.96ISRR164 pKa = 11.84NYY166 pKa = 8.09VTLEE170 pKa = 4.04GGVKK174 pKa = 9.82VAMPRR179 pKa = 11.84YY180 pKa = 8.37YY181 pKa = 10.07RR182 pKa = 11.84EE183 pKa = 3.95KK184 pKa = 9.97IYY186 pKa = 10.69TEE188 pKa = 4.05EE189 pKa = 3.75EE190 pKa = 3.82RR191 pKa = 11.84NRR193 pKa = 11.84QNLINEE199 pKa = 4.38KK200 pKa = 10.24SATRR204 pKa = 11.84ALDD207 pKa = 3.44EE208 pKa = 5.35RR209 pKa = 11.84EE210 pKa = 3.33TDD212 pKa = 3.7YY213 pKa = 11.15IGRR216 pKa = 11.84TGTDD220 pKa = 3.04DD221 pKa = 3.48YY222 pKa = 11.7LRR224 pKa = 11.84ADD226 pKa = 4.28FEE228 pKa = 4.89SKK230 pKa = 9.96KK231 pKa = 10.96AKK233 pKa = 10.43LEE235 pKa = 3.99NFRR238 pKa = 11.84KK239 pKa = 9.91RR240 pKa = 11.84AGDD243 pKa = 3.41NRR245 pKa = 11.84KK246 pKa = 8.18TII248 pKa = 3.75

Molecular weight: 29.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1284

67

525

256.8

28.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.411 ± 0.947

0.623 ± 0.612

5.841 ± 0.448

5.763 ± 0.65

3.66 ± 0.774

6.542 ± 0.624

2.492 ± 0.451

5.14 ± 0.618

5.997 ± 0.72

8.022 ± 0.698

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.193 ± 0.246

5.218 ± 0.798

4.984 ± 0.913

5.218 ± 0.875

5.685 ± 0.793

6.854 ± 0.549

5.919 ± 0.189

4.595 ± 0.741

1.168 ± 0.148

4.673 ± 0.718
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski