Absidia repens

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina; Mucoromycetes; Mucorales; Cunninghamellaceae; Absidia

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14767 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1X2I7U2|A0A1X2I7U2_9FUNG CUE domain-containing protein OS=Absidia repens OX=90262 GN=BCR42DRAFT_421547 PE=4 SV=1
MM1 pKa = 7.38TSAFNSGIFKK11 pKa = 9.72TLVEE15 pKa = 4.31ANQRR19 pKa = 11.84SCDD22 pKa = 4.17LINSFVGSFDD32 pKa = 3.78FNRR35 pKa = 11.84NKK37 pKa = 10.77SNTLQEE43 pKa = 4.59LKK45 pKa = 10.51EE46 pKa = 4.18QTFHH50 pKa = 6.0TKK52 pKa = 10.45LYY54 pKa = 10.64INIQNTLPFIKK65 pKa = 10.44HH66 pKa = 6.53NIPKK70 pKa = 9.91AYY72 pKa = 10.34CEE74 pKa = 3.87LSYY77 pKa = 11.41EE78 pKa = 4.72NIVLWIQRR86 pKa = 11.84ALYY89 pKa = 9.12RR90 pKa = 11.84INVATFIRR98 pKa = 11.84FLEE101 pKa = 4.2LDD103 pKa = 3.72NIYY106 pKa = 10.99NAGKK110 pKa = 10.28FSLHH114 pKa = 6.29HH115 pKa = 5.72ICYY118 pKa = 10.19EE119 pKa = 3.91EE120 pKa = 4.01EE121 pKa = 4.04TRR123 pKa = 11.84SNDD126 pKa = 3.07VQAAFVDD133 pKa = 3.83LRR135 pKa = 11.84TRR137 pKa = 11.84LLATLVADD145 pKa = 5.79EE146 pKa = 5.38IDD148 pKa = 3.4TSSNEE153 pKa = 3.79NTSIEE158 pKa = 4.13MSPLMEE164 pKa = 4.13RR165 pKa = 11.84TLPLDD170 pKa = 3.84GSAFGLYY177 pKa = 9.86PEE179 pKa = 5.2EE180 pKa = 5.92DD181 pKa = 3.42DD182 pKa = 6.48DD183 pKa = 7.19FILEE187 pKa = 4.16LLKK190 pKa = 10.38QRR192 pKa = 11.84HH193 pKa = 5.1EE194 pKa = 4.79MITTLPDD201 pKa = 3.26SDD203 pKa = 5.16ALDD206 pKa = 4.08ALVTADD212 pKa = 4.04NLINVWKK219 pKa = 9.83VAIIASMYY227 pKa = 10.52RR228 pKa = 11.84MPALEE233 pKa = 5.17LPPGFPPNQSNDD245 pKa = 3.05DD246 pKa = 3.92VYY248 pKa = 11.13IKK250 pKa = 10.67QEE252 pKa = 3.96DD253 pKa = 4.33VLTDD257 pKa = 3.62VYY259 pKa = 11.53SDD261 pKa = 3.32AQEE264 pKa = 3.98YY265 pKa = 10.35QYY267 pKa = 11.52SQDD270 pKa = 3.04RR271 pKa = 11.84HH272 pKa = 5.75LSQVYY277 pKa = 9.21QLSQEE282 pKa = 4.31GEE284 pKa = 4.3SYY286 pKa = 10.99EE287 pKa = 4.78SNTHH291 pKa = 5.73GNTPIKK297 pKa = 10.68QEE299 pKa = 5.24DD300 pKa = 3.67DD301 pKa = 3.64DD302 pKa = 4.79NYY304 pKa = 11.5NGIAAQQYY312 pKa = 9.93GSTTFTTPCDD322 pKa = 3.6SGDD325 pKa = 4.26DD326 pKa = 4.01SDD328 pKa = 5.32HH329 pKa = 6.85SYY331 pKa = 11.13QGVEE335 pKa = 3.95YY336 pKa = 10.59LPNPVLATHH345 pKa = 7.41ILPGDD350 pKa = 3.68DD351 pKa = 3.72PEE353 pKa = 4.6FFEE356 pKa = 4.64GDD358 pKa = 3.54RR359 pKa = 11.84YY360 pKa = 11.13VLASPSLTEE369 pKa = 4.35HH370 pKa = 7.35DD371 pKa = 5.48LPGDD375 pKa = 4.01DD376 pKa = 6.02DD377 pKa = 5.52NDD379 pKa = 4.05FEE381 pKa = 6.29GDD383 pKa = 3.4QYY385 pKa = 11.86HH386 pKa = 7.21LARR389 pKa = 11.84PSFAEE394 pKa = 4.31NGLPDD399 pKa = 4.13NVEE402 pKa = 4.01KK403 pKa = 10.85DD404 pKa = 3.68DD405 pKa = 5.12EE406 pKa = 4.62NGQSHH411 pKa = 7.34LYY413 pKa = 9.76EE414 pKa = 4.66PPEE417 pKa = 4.23DD418 pKa = 3.72SNYY421 pKa = 10.57CEE423 pKa = 4.74DD424 pKa = 3.9QLGTLDD430 pKa = 4.38EE431 pKa = 4.49QNKK434 pKa = 9.86HH435 pKa = 6.47PDD437 pKa = 3.34TNINTDD443 pKa = 2.98TDD445 pKa = 3.51TDD447 pKa = 3.48TDD449 pKa = 3.9TNINITITINSDD461 pKa = 3.46SITNSNTNTMNVHH474 pKa = 5.57STDD477 pKa = 3.25KK478 pKa = 11.34AGDD481 pKa = 3.58GSEE484 pKa = 4.06GGGILEE490 pKa = 5.01EE491 pKa = 4.65NDD493 pKa = 3.86DD494 pKa = 4.0DD495 pKa = 5.9AGNQLEE501 pKa = 4.49EE502 pKa = 4.5SEE504 pKa = 4.93ADD506 pKa = 3.39HH507 pKa = 7.28DD508 pKa = 4.32HH509 pKa = 6.77GSVGTHH515 pKa = 5.44TPIIDD520 pKa = 3.95WNRR523 pKa = 11.84HH524 pKa = 4.78LAPSTAISDD533 pKa = 3.84PFSDD537 pKa = 4.67SEE539 pKa = 4.21IGHH542 pKa = 6.72DD543 pKa = 5.83LEE545 pKa = 7.27DD546 pKa = 4.16NDD548 pKa = 5.66DD549 pKa = 3.97NNEE552 pKa = 3.71FDD554 pKa = 4.98LFPAAHH560 pKa = 6.97EE561 pKa = 4.54DD562 pKa = 4.56DD563 pKa = 4.25YY564 pKa = 12.16AADD567 pKa = 3.7VNNMYY572 pKa = 7.76EE573 pKa = 4.4TTSPWNFDD581 pKa = 3.47DD582 pKa = 4.47ATEE585 pKa = 4.06FDD587 pKa = 3.96INQQYY592 pKa = 9.1TMVDD596 pKa = 4.24EE597 pKa = 4.51IAGDD601 pKa = 4.0DD602 pKa = 5.2DD603 pKa = 4.84IDD605 pKa = 4.28TPSEE609 pKa = 4.29MPTKK613 pKa = 10.73ADD615 pKa = 3.37DD616 pKa = 3.62TVTIDD621 pKa = 3.22THH623 pKa = 4.74TTAIDD628 pKa = 3.54NSSSSQAHH636 pKa = 5.85MDD638 pKa = 3.41STSVHH643 pKa = 6.6GISNQLEE650 pKa = 4.18SSPVDD655 pKa = 3.04THH657 pKa = 7.33LATEE661 pKa = 4.31AQNDD665 pKa = 3.9DD666 pKa = 4.08EE667 pKa = 5.12GADD670 pKa = 3.81DD671 pKa = 6.21LVDD674 pKa = 3.97EE675 pKa = 5.08YY676 pKa = 11.33EE677 pKa = 4.48DD678 pKa = 3.14VDD680 pKa = 3.87NRR682 pKa = 11.84VEE684 pKa = 3.97ASAEE688 pKa = 3.81ALEE691 pKa = 4.79NDD693 pKa = 4.5DD694 pKa = 4.99LTTTSPTLAGAHH706 pKa = 5.15VAGNDD711 pKa = 3.69ASDD714 pKa = 3.72SDD716 pKa = 4.01EE717 pKa = 4.65DD718 pKa = 5.97LIDD721 pKa = 3.94EE722 pKa = 5.41LEE724 pKa = 4.49NDD726 pKa = 4.46DD727 pKa = 5.98DD728 pKa = 6.63DD729 pKa = 6.4DD730 pKa = 6.01SEE732 pKa = 4.59YY733 pKa = 11.13QLDD736 pKa = 4.32PDD738 pKa = 4.35EE739 pKa = 5.27MDD741 pKa = 5.29DD742 pKa = 4.93SSSTNNSYY750 pKa = 10.71IEE752 pKa = 4.2TTGGEE757 pKa = 4.44GEE759 pKa = 4.29GRR761 pKa = 11.84NN762 pKa = 3.71

Molecular weight: 84.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1X2ILU6|A0A1X2ILU6_9FUNG Mitochondrial glycine transporter OS=Absidia repens OX=90262 GN=BCR42DRAFT_411493 PE=3 SV=1
MM1 pKa = 7.62GNFTLGMLLVVMTMTRR17 pKa = 11.84RR18 pKa = 11.84LTMRR22 pKa = 11.84FTSRR26 pKa = 11.84LGRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84GRR33 pKa = 11.84DD34 pKa = 3.01TTSIMGNFTLGMLLVIMTMTRR55 pKa = 11.84RR56 pKa = 11.84LTMRR60 pKa = 11.84FTSRR64 pKa = 11.84LGRR67 pKa = 11.84RR68 pKa = 11.84GRR70 pKa = 11.84DD71 pKa = 3.09TTSIMGNLTLSLATWFMVMGVFLLMMRR98 pKa = 11.84VTADD102 pKa = 3.07RR103 pKa = 11.84RR104 pKa = 11.84RR105 pKa = 11.84RR106 pKa = 11.84NTLLLMLGVTSGIHH120 pKa = 5.84SSS122 pKa = 3.23

Molecular weight: 13.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14767

0

14767

6231592

49

7673

422.0

47.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.591 ± 0.018

1.387 ± 0.008

6.191 ± 0.017

5.196 ± 0.019

3.75 ± 0.014

5.371 ± 0.016

2.987 ± 0.012

5.486 ± 0.016

5.448 ± 0.02

9.168 ± 0.021

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.606 ± 0.008

4.753 ± 0.012

5.122 ± 0.022

5.284 ± 0.022

4.891 ± 0.013

8.81 ± 0.031

6.777 ± 0.017

5.693 ± 0.02

1.196 ± 0.007

3.292 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski