Meiothermus phage MMP7

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 53 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G8F4V1|A0A3G8F4V1_9CAUD Uncharacterized protein OS=Meiothermus phage MMP7 OX=2483850 PE=4 SV=1
MM1 pKa = 7.24CQEE4 pKa = 4.39CQGCGYY10 pKa = 10.11VEE12 pKa = 4.32YY13 pKa = 10.92VAGFYY18 pKa = 10.83FSDD21 pKa = 3.39SFGNYY26 pKa = 9.42LPRR29 pKa = 11.84EE30 pKa = 4.13EE31 pKa = 4.13IARR34 pKa = 11.84CEE36 pKa = 4.28VCDD39 pKa = 3.43GTGFVEE45 pKa = 5.14VWDD48 pKa = 3.73EE49 pKa = 4.3DD50 pKa = 4.06EE51 pKa = 5.73AVLEE55 pKa = 4.42GDD57 pKa = 3.85GG58 pKa = 4.34

Molecular weight: 6.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3G8F535|A0A3G8F535_9CAUD Major capsid protein OS=Meiothermus phage MMP7 OX=2483850 PE=4 SV=1
MM1 pKa = 7.53TRR3 pKa = 11.84LQWTFDD9 pKa = 3.5LLDD12 pKa = 4.01RR13 pKa = 11.84VSAPARR19 pKa = 11.84RR20 pKa = 11.84IGQALKK26 pKa = 9.38NTDD29 pKa = 3.25AALKK33 pKa = 9.68KK34 pKa = 10.22VAGGGEE40 pKa = 4.05AAQKK44 pKa = 10.56ALQRR48 pKa = 11.84SFGLSEE54 pKa = 3.76RR55 pKa = 11.84AAVRR59 pKa = 11.84LTTAIATVGQVQGAIGGLQARR80 pKa = 11.84VGALRR85 pKa = 11.84GAFSSVTDD93 pKa = 3.6SVFNLKK99 pKa = 10.01NALVAGAIGFATKK112 pKa = 10.48VVIDD116 pKa = 3.36QVGFIEE122 pKa = 4.15QQRR125 pKa = 11.84IALGTILGSPIRR137 pKa = 11.84ATAALDD143 pKa = 3.47WAIKK147 pKa = 9.8FADD150 pKa = 3.61VTPFEE155 pKa = 4.44TPQVLEE161 pKa = 4.31AMRR164 pKa = 11.84QALAVGFNTKK174 pKa = 10.08QIEE177 pKa = 4.18PLLTTLGDD185 pKa = 3.45TAAALSLGPAGLNDD199 pKa = 5.62LITVFGQIRR208 pKa = 11.84SAGKK212 pKa = 10.54LNTEE216 pKa = 4.37EE217 pKa = 4.4VNQLTEE223 pKa = 3.94RR224 pKa = 11.84GIPAFEE230 pKa = 4.06ILAKK234 pKa = 10.57AFSTDD239 pKa = 2.85IPTVRR244 pKa = 11.84QMIEE248 pKa = 3.48KK249 pKa = 10.12GQIASEE255 pKa = 4.05AALGAIYY262 pKa = 10.33RR263 pKa = 11.84GLKK266 pKa = 8.28TRR268 pKa = 11.84FGGGMAAQSRR278 pKa = 11.84SIFGLVSTLRR288 pKa = 11.84SRR290 pKa = 11.84PQTIAFRR297 pKa = 11.84LEE299 pKa = 3.49RR300 pKa = 11.84DD301 pKa = 3.25KK302 pKa = 11.51ALEE305 pKa = 3.81PFRR308 pKa = 11.84RR309 pKa = 11.84LLMNLADD316 pKa = 3.75LTDD319 pKa = 4.1FNKK322 pKa = 10.55PPGSTIAARR331 pKa = 11.84LTSGIGGLFKK341 pKa = 10.8AAFGPLAAATEE352 pKa = 4.2PKK354 pKa = 10.24RR355 pKa = 11.84AGEE358 pKa = 3.89AVLAFINRR366 pKa = 11.84ATAAVNRR373 pKa = 11.84ARR375 pKa = 11.84DD376 pKa = 3.17AWPAVKK382 pKa = 9.96AAALDD387 pKa = 4.42FISGVRR393 pKa = 11.84SGFDD397 pKa = 3.25LLAGIWRR404 pKa = 11.84TVEE407 pKa = 3.88PLVSGLGRR415 pKa = 11.84LAGSFTGAQASMGGANINAVKK436 pKa = 10.44IIGTIAALAAVWRR449 pKa = 11.84VLNLVTLGGAGAIARR464 pKa = 11.84WGAIAVVSLVRR475 pKa = 11.84VAAVGLPILWAKK487 pKa = 10.41IGALNTLGVTALRR500 pKa = 11.84ASGRR504 pKa = 11.84ALLAGGRR511 pKa = 11.84MALAWIIGLGPIGWLIGGVAAISGALVLAYY541 pKa = 10.78NKK543 pKa = 9.87VDD545 pKa = 3.09WFRR548 pKa = 11.84NVVNRR553 pKa = 11.84AWEE556 pKa = 4.29SIKK559 pKa = 10.59QVGKK563 pKa = 10.95GLLDD567 pKa = 3.5WFTSLPTRR575 pKa = 11.84IGQTFAQLPNLLRR588 pKa = 11.84GLLRR592 pKa = 11.84RR593 pKa = 11.84AIDD596 pKa = 3.82LLPPGVRR603 pKa = 11.84DD604 pKa = 3.65VVRR607 pKa = 11.84GLVGGLLDD615 pKa = 4.8GSDD618 pKa = 3.78PVEE621 pKa = 4.22NAATQLADD629 pKa = 3.22KK630 pKa = 8.07TQQGFARR637 pKa = 11.84PLEE640 pKa = 4.0IRR642 pKa = 11.84SPSRR646 pKa = 11.84RR647 pKa = 11.84FAYY650 pKa = 9.48YY651 pKa = 10.07GQMMGAGLEE660 pKa = 4.0VGMRR664 pKa = 11.84DD665 pKa = 2.93SLGRR669 pKa = 11.84VQRR672 pKa = 11.84AAAGMTIAATLAMSGGPALSVAPPALAPTTRR703 pKa = 11.84AISITVGPITVNGGSDD719 pKa = 3.24TKK721 pKa = 11.0QIADD725 pKa = 3.92EE726 pKa = 4.25LRR728 pKa = 11.84TVAVEE733 pKa = 4.15AVLEE737 pKa = 4.13ALEE740 pKa = 4.32RR741 pKa = 11.84AAHH744 pKa = 6.06EE745 pKa = 4.44EE746 pKa = 4.36GAA748 pKa = 3.95

Molecular weight: 78.06 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

53

0

53

10268

40

748

193.7

21.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.096 ± 0.514

0.779 ± 0.167

4.704 ± 0.213

7.372 ± 0.586

2.376 ± 0.201

8.239 ± 0.408

1.529 ± 0.223

4.1 ± 0.265

2.649 ± 0.276

11.102 ± 0.37

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.558 ± 0.095

2.678 ± 0.224

6.048 ± 0.347

3.759 ± 0.192

8.668 ± 0.432

4.48 ± 0.159

5.619 ± 0.37

6.515 ± 0.311

2.707 ± 0.208

3.019 ± 0.246
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski