Mosquito VEM Anellovirus SDRB A

Taxonomy: Viruses; Anelloviridae; Wawtorquevirus; Torque teno arthrovec virus 2

Average proteome isoelectric point is 7.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F6KID5|F6KID5_9VIRU Capsid protein OS=Mosquito VEM Anellovirus SDRB A OX=1034792 PE=3 SV=1
MM1 pKa = 7.14SQTTEE6 pKa = 3.48RR7 pKa = 11.84FLNFKK12 pKa = 10.33KK13 pKa = 10.67KK14 pKa = 9.59EE15 pKa = 3.68ALFRR19 pKa = 11.84KK20 pKa = 6.93TVRR23 pKa = 11.84AAHH26 pKa = 6.28QLFCNCEE33 pKa = 4.02DD34 pKa = 3.96PVQHH38 pKa = 6.58LLGWRR43 pKa = 11.84TTIPGEE49 pKa = 4.43GIVGTVDD56 pKa = 3.48TSQEE60 pKa = 3.86HH61 pKa = 6.84AEE63 pKa = 4.38PGDD66 pKa = 3.84AEE68 pKa = 4.32LLEE71 pKa = 4.13EE72 pKa = 5.65LIDD75 pKa = 3.79AGIRR79 pKa = 11.84AGGG82 pKa = 3.23

Molecular weight: 9.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F6KID6|F6KID6_9VIRU Uncharacterized protein OS=Mosquito VEM Anellovirus SDRB A OX=1034792 PE=4 SV=1
MM1 pKa = 8.02RR2 pKa = 11.84YY3 pKa = 9.65SKK5 pKa = 10.57QRR7 pKa = 11.84TSTQMVSSLGVPLQEE22 pKa = 4.57LLNLISPQKK31 pKa = 9.2TRR33 pKa = 11.84PGYY36 pKa = 9.39KK37 pKa = 9.31KK38 pKa = 9.99RR39 pKa = 11.84RR40 pKa = 11.84SGAQSNIKK48 pKa = 9.77EE49 pKa = 4.24DD50 pKa = 3.6QEE52 pKa = 4.37KK53 pKa = 10.6EE54 pKa = 3.95NEE56 pKa = 4.46GYY58 pKa = 10.45YY59 pKa = 10.05PPRR62 pKa = 11.84AKK64 pKa = 10.28KK65 pKa = 9.78KK66 pKa = 9.7RR67 pKa = 11.84RR68 pKa = 11.84RR69 pKa = 11.84TTALPRR75 pKa = 11.84RR76 pKa = 11.84TRR78 pKa = 11.84KK79 pKa = 7.39HH80 pKa = 4.9HH81 pKa = 5.7KK82 pKa = 9.61RR83 pKa = 11.84RR84 pKa = 11.84RR85 pKa = 11.84SQQGDD90 pKa = 3.55STDD93 pKa = 3.62TEE95 pKa = 4.42EE96 pKa = 5.89SSEE99 pKa = 4.15SWSSSWTEE107 pKa = 3.49

Molecular weight: 12.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

770

82

581

256.7

30.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.065 ± 0.714

1.169 ± 0.315

4.026 ± 0.315

6.494 ± 1.427

3.506 ± 0.943

6.753 ± 0.633

2.208 ± 0.287

4.156 ± 0.627

6.494 ± 1.01

7.792 ± 0.568

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.558 ± 0.084

3.766 ± 0.525

5.844 ± 0.54

4.805 ± 0.828

10.13 ± 1.037

7.532 ± 1.671

7.143 ± 0.621

3.766 ± 0.492

3.896 ± 1.081

3.896 ± 0.914
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski