Amino acid dipepetide frequency for Hubei odonate virus 2

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.834AlaAla: 4.834 ± 0.0
1.289AlaCys: 1.289 ± 0.0
2.578AlaAsp: 2.578 ± 0.0
3.545AlaGlu: 3.545 ± 0.0
2.9AlaPhe: 2.9 ± 0.0
1.289AlaGly: 1.289 ± 0.0
2.9AlaHis: 2.9 ± 0.0
5.479AlaIle: 5.479 ± 0.0
2.256AlaLys: 2.256 ± 0.0
6.768AlaLeu: 6.768 ± 0.0
0.967AlaMet: 0.967 ± 0.0
1.934AlaAsn: 1.934 ± 0.0
2.256AlaPro: 2.256 ± 0.0
4.512AlaGln: 4.512 ± 0.0
3.867AlaArg: 3.867 ± 0.0
5.479AlaSer: 5.479 ± 0.0
2.578AlaThr: 2.578 ± 0.0
3.223AlaVal: 3.223 ± 0.0
0.967AlaTrp: 0.967 ± 0.0
3.223AlaTyr: 3.223 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.611CysAla: 1.611 ± 0.0
0.645CysCys: 0.645 ± 0.0
0.967CysAsp: 0.967 ± 0.0
1.289CysGlu: 1.289 ± 0.0
0.645CysPhe: 0.645 ± 0.0
1.289CysGly: 1.289 ± 0.0
0.967CysHis: 0.967 ± 0.0
1.611CysIle: 1.611 ± 0.0
0.967CysLys: 0.967 ± 0.0
3.545CysLeu: 3.545 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.322CysAsn: 0.322 ± 0.0
0.645CysPro: 0.645 ± 0.0
0.322CysGln: 0.322 ± 0.0
0.967CysArg: 0.967 ± 0.0
2.9CysSer: 2.9 ± 0.0
0.0CysThr: 0.0 ± 0.0
1.289CysVal: 1.289 ± 0.0
0.322CysTrp: 0.322 ± 0.0
1.289CysTyr: 1.289 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.189AspAla: 4.189 ± 0.0
1.289AspCys: 1.289 ± 0.0
2.9AspAsp: 2.9 ± 0.0
4.834AspGlu: 4.834 ± 0.0
2.256AspPhe: 2.256 ± 0.0
2.256AspGly: 2.256 ± 0.0
0.322AspHis: 0.322 ± 0.0
3.867AspIle: 3.867 ± 0.0
3.223AspLys: 3.223 ± 0.0
5.801AspLeu: 5.801 ± 0.0
1.289AspMet: 1.289 ± 0.0
1.289AspAsn: 1.289 ± 0.0
4.189AspPro: 4.189 ± 0.0
0.967AspGln: 0.967 ± 0.0
1.611AspArg: 1.611 ± 0.0
4.189AspSer: 4.189 ± 0.0
3.223AspThr: 3.223 ± 0.0
3.545AspVal: 3.545 ± 0.0
1.934AspTrp: 1.934 ± 0.0
0.645AspTyr: 0.645 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.9GluAla: 2.9 ± 0.0
1.934GluCys: 1.934 ± 0.0
3.545GluAsp: 3.545 ± 0.0
1.611GluGlu: 1.611 ± 0.0
1.934GluPhe: 1.934 ± 0.0
2.578GluGly: 2.578 ± 0.0
1.611GluHis: 1.611 ± 0.0
3.545GluIle: 3.545 ± 0.0
3.545GluLys: 3.545 ± 0.0
2.578GluLeu: 2.578 ± 0.0
0.967GluMet: 0.967 ± 0.0
1.289GluAsn: 1.289 ± 0.0
4.189GluPro: 4.189 ± 0.0
2.578GluGln: 2.578 ± 0.0
2.9GluArg: 2.9 ± 0.0
2.9GluSer: 2.9 ± 0.0
3.545GluThr: 3.545 ± 0.0
2.578GluVal: 2.578 ± 0.0
0.322GluTrp: 0.322 ± 0.0
1.289GluTyr: 1.289 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.611PheAla: 1.611 ± 0.0
0.322PheCys: 0.322 ± 0.0
2.578PheAsp: 2.578 ± 0.0
2.578PheGlu: 2.578 ± 0.0
1.289PhePhe: 1.289 ± 0.0
2.578PheGly: 2.578 ± 0.0
1.934PheHis: 1.934 ± 0.0
2.256PheIle: 2.256 ± 0.0
3.867PheLys: 3.867 ± 0.0
3.223PheLeu: 3.223 ± 0.0
0.322PheMet: 0.322 ± 0.0
2.578PheAsn: 2.578 ± 0.0
3.545PhePro: 3.545 ± 0.0
1.289PheGln: 1.289 ± 0.0
2.9PheArg: 2.9 ± 0.0
4.189PheSer: 4.189 ± 0.0
3.545PheThr: 3.545 ± 0.0
3.867PheVal: 3.867 ± 0.0
0.967PheTrp: 0.967 ± 0.0
1.934PheTyr: 1.934 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.578GlyAla: 2.578 ± 0.0
0.322GlyCys: 0.322 ± 0.0
4.834GlyAsp: 4.834 ± 0.0
1.934GlyGlu: 1.934 ± 0.0
2.9GlyPhe: 2.9 ± 0.0
2.9GlyGly: 2.9 ± 0.0
0.645GlyHis: 0.645 ± 0.0
2.578GlyIle: 2.578 ± 0.0
4.189GlyLys: 4.189 ± 0.0
3.867GlyLeu: 3.867 ± 0.0
1.934GlyMet: 1.934 ± 0.0
2.578GlyAsn: 2.578 ± 0.0
2.578GlyPro: 2.578 ± 0.0
1.934GlyGln: 1.934 ± 0.0
2.9GlyArg: 2.9 ± 0.0
2.578GlySer: 2.578 ± 0.0
4.512GlyThr: 4.512 ± 0.0
4.512GlyVal: 4.512 ± 0.0
0.645GlyTrp: 0.645 ± 0.0
1.934GlyTyr: 1.934 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.611HisAla: 1.611 ± 0.0
1.289HisCys: 1.289 ± 0.0
0.322HisAsp: 0.322 ± 0.0
0.0HisGlu: 0.0 ± 0.0
0.967HisPhe: 0.967 ± 0.0
0.967HisGly: 0.967 ± 0.0
0.645HisHis: 0.645 ± 0.0
1.611HisIle: 1.611 ± 0.0
0.645HisLys: 0.645 ± 0.0
1.934HisLeu: 1.934 ± 0.0
0.645HisMet: 0.645 ± 0.0
1.289HisAsn: 1.289 ± 0.0
1.934HisPro: 1.934 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.645HisArg: 0.645 ± 0.0
1.934HisSer: 1.934 ± 0.0
1.289HisThr: 1.289 ± 0.0
2.9HisVal: 2.9 ± 0.0
0.645HisTrp: 0.645 ± 0.0
1.934HisTyr: 1.934 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.512IleAla: 4.512 ± 0.0
1.289IleCys: 1.289 ± 0.0
3.867IleAsp: 3.867 ± 0.0
1.934IleGlu: 1.934 ± 0.0
4.189IlePhe: 4.189 ± 0.0
3.223IleGly: 3.223 ± 0.0
0.967IleHis: 0.967 ± 0.0
2.578IleIle: 2.578 ± 0.0
4.512IleLys: 4.512 ± 0.0
5.479IleLeu: 5.479 ± 0.0
2.578IleMet: 2.578 ± 0.0
4.512IleAsn: 4.512 ± 0.0
4.512IlePro: 4.512 ± 0.0
0.967IleGln: 0.967 ± 0.0
1.934IleArg: 1.934 ± 0.0
6.123IleSer: 6.123 ± 0.0
2.9IleThr: 2.9 ± 0.0
5.156IleVal: 5.156 ± 0.0
0.645IleTrp: 0.645 ± 0.0
2.578IleTyr: 2.578 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.867LysAla: 3.867 ± 0.0
0.322LysCys: 0.322 ± 0.0
2.578LysAsp: 2.578 ± 0.0
3.545LysGlu: 3.545 ± 0.0
4.512LysPhe: 4.512 ± 0.0
4.834LysGly: 4.834 ± 0.0
0.967LysHis: 0.967 ± 0.0
4.834LysIle: 4.834 ± 0.0
5.801LysLys: 5.801 ± 0.0
5.156LysLeu: 5.156 ± 0.0
1.611LysMet: 1.611 ± 0.0
1.934LysAsn: 1.934 ± 0.0
1.611LysPro: 1.611 ± 0.0
2.578LysGln: 2.578 ± 0.0
2.256LysArg: 2.256 ± 0.0
3.545LysSer: 3.545 ± 0.0
3.867LysThr: 3.867 ± 0.0
3.867LysVal: 3.867 ± 0.0
1.934LysTrp: 1.934 ± 0.0
3.223LysTyr: 3.223 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.057LeuAla: 8.057 ± 0.0
3.223LeuCys: 3.223 ± 0.0
5.479LeuAsp: 5.479 ± 0.0
3.545LeuGlu: 3.545 ± 0.0
4.189LeuPhe: 4.189 ± 0.0
6.445LeuGly: 6.445 ± 0.0
2.9LeuHis: 2.9 ± 0.0
3.545LeuIle: 3.545 ± 0.0
5.479LeuLys: 5.479 ± 0.0
7.09LeuLeu: 7.09 ± 0.0
3.223LeuMet: 3.223 ± 0.0
5.479LeuAsn: 5.479 ± 0.0
5.801LeuPro: 5.801 ± 0.0
4.189LeuGln: 4.189 ± 0.0
5.156LeuArg: 5.156 ± 0.0
6.445LeuSer: 6.445 ± 0.0
3.545LeuThr: 3.545 ± 0.0
4.834LeuVal: 4.834 ± 0.0
0.967LeuTrp: 0.967 ± 0.0
3.223LeuTyr: 3.223 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.967MetAla: 0.967 ± 0.0
1.289MetCys: 1.289 ± 0.0
1.611MetAsp: 1.611 ± 0.0
1.934MetGlu: 1.934 ± 0.0
0.322MetPhe: 0.322 ± 0.0
0.645MetGly: 0.645 ± 0.0
0.322MetHis: 0.322 ± 0.0
1.289MetIle: 1.289 ± 0.0
2.256MetLys: 2.256 ± 0.0
2.9MetLeu: 2.9 ± 0.0
0.645MetMet: 0.645 ± 0.0
0.645MetAsn: 0.645 ± 0.0
0.967MetPro: 0.967 ± 0.0
0.967MetGln: 0.967 ± 0.0
1.289MetArg: 1.289 ± 0.0
2.578MetSer: 2.578 ± 0.0
0.645MetThr: 0.645 ± 0.0
1.289MetVal: 1.289 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.611MetTyr: 1.611 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.223AsnAla: 3.223 ± 0.0
0.967AsnCys: 0.967 ± 0.0
2.578AsnAsp: 2.578 ± 0.0
1.934AsnGlu: 1.934 ± 0.0
2.578AsnPhe: 2.578 ± 0.0
0.645AsnGly: 0.645 ± 0.0
0.645AsnHis: 0.645 ± 0.0
4.834AsnIle: 4.834 ± 0.0
2.578AsnLys: 2.578 ± 0.0
6.445AsnLeu: 6.445 ± 0.0
0.967AsnMet: 0.967 ± 0.0
3.223AsnAsn: 3.223 ± 0.0
1.934AsnPro: 1.934 ± 0.0
0.645AsnGln: 0.645 ± 0.0
1.611AsnArg: 1.611 ± 0.0
3.867AsnSer: 3.867 ± 0.0
1.611AsnThr: 1.611 ± 0.0
3.223AsnVal: 3.223 ± 0.0
0.322AsnTrp: 0.322 ± 0.0
2.578AsnTyr: 2.578 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.934ProAla: 1.934 ± 0.0
0.967ProCys: 0.967 ± 0.0
3.545ProAsp: 3.545 ± 0.0
1.934ProGlu: 1.934 ± 0.0
2.256ProPhe: 2.256 ± 0.0
2.256ProGly: 2.256 ± 0.0
0.967ProHis: 0.967 ± 0.0
3.867ProIle: 3.867 ± 0.0
3.545ProLys: 3.545 ± 0.0
7.412ProLeu: 7.412 ± 0.0
1.289ProMet: 1.289 ± 0.0
2.256ProAsn: 2.256 ± 0.0
4.189ProPro: 4.189 ± 0.0
2.578ProGln: 2.578 ± 0.0
3.223ProArg: 3.223 ± 0.0
4.834ProSer: 4.834 ± 0.0
3.223ProThr: 3.223 ± 0.0
4.834ProVal: 4.834 ± 0.0
0.322ProTrp: 0.322 ± 0.0
1.934ProTyr: 1.934 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.545GlnAla: 3.545 ± 0.0
0.322GlnCys: 0.322 ± 0.0
1.611GlnAsp: 1.611 ± 0.0
2.256GlnGlu: 2.256 ± 0.0
1.934GlnPhe: 1.934 ± 0.0
3.223GlnGly: 3.223 ± 0.0
0.645GlnHis: 0.645 ± 0.0
1.934GlnIle: 1.934 ± 0.0
1.611GlnLys: 1.611 ± 0.0
2.256GlnLeu: 2.256 ± 0.0
0.967GlnMet: 0.967 ± 0.0
1.934GlnAsn: 1.934 ± 0.0
0.967GlnPro: 0.967 ± 0.0
0.967GlnGln: 0.967 ± 0.0
1.934GlnArg: 1.934 ± 0.0
2.9GlnSer: 2.9 ± 0.0
0.967GlnThr: 0.967 ± 0.0
2.256GlnVal: 2.256 ± 0.0
0.645GlnTrp: 0.645 ± 0.0
2.578GlnTyr: 2.578 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.934ArgAla: 1.934 ± 0.0
1.611ArgCys: 1.611 ± 0.0
2.578ArgAsp: 2.578 ± 0.0
2.578ArgGlu: 2.578 ± 0.0
3.545ArgPhe: 3.545 ± 0.0
2.256ArgGly: 2.256 ± 0.0
0.967ArgHis: 0.967 ± 0.0
2.256ArgIle: 2.256 ± 0.0
3.545ArgLys: 3.545 ± 0.0
3.545ArgLeu: 3.545 ± 0.0
0.0ArgMet: 0.0 ± 0.0
2.578ArgAsn: 2.578 ± 0.0
3.223ArgPro: 3.223 ± 0.0
1.934ArgGln: 1.934 ± 0.0
2.578ArgArg: 2.578 ± 0.0
3.223ArgSer: 3.223 ± 0.0
1.611ArgThr: 1.611 ± 0.0
2.9ArgVal: 2.9 ± 0.0
0.645ArgTrp: 0.645 ± 0.0
1.611ArgTyr: 1.611 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.545SerAla: 3.545 ± 0.0
0.967SerCys: 0.967 ± 0.0
4.512SerAsp: 4.512 ± 0.0
4.512SerGlu: 4.512 ± 0.0
3.545SerPhe: 3.545 ± 0.0
3.867SerGly: 3.867 ± 0.0
2.578SerHis: 2.578 ± 0.0
5.156SerIle: 5.156 ± 0.0
5.156SerLys: 5.156 ± 0.0
9.668SerLeu: 9.668 ± 0.0
1.611SerMet: 1.611 ± 0.0
5.156SerAsn: 5.156 ± 0.0
6.445SerPro: 6.445 ± 0.0
2.9SerGln: 2.9 ± 0.0
1.934SerArg: 1.934 ± 0.0
9.99SerSer: 9.99 ± 0.0
4.189SerThr: 4.189 ± 0.0
4.189SerVal: 4.189 ± 0.0
1.289SerTrp: 1.289 ± 0.0
3.867SerTyr: 3.867 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.9ThrAla: 2.9 ± 0.0
0.322ThrCys: 0.322 ± 0.0
1.934ThrAsp: 1.934 ± 0.0
2.256ThrGlu: 2.256 ± 0.0
1.934ThrPhe: 1.934 ± 0.0
3.545ThrGly: 3.545 ± 0.0
0.967ThrHis: 0.967 ± 0.0
4.189ThrIle: 4.189 ± 0.0
3.223ThrLys: 3.223 ± 0.0
4.834ThrLeu: 4.834 ± 0.0
1.289ThrMet: 1.289 ± 0.0
2.256ThrAsn: 2.256 ± 0.0
1.289ThrPro: 1.289 ± 0.0
1.289ThrGln: 1.289 ± 0.0
2.256ThrArg: 2.256 ± 0.0
6.768ThrSer: 6.768 ± 0.0
1.934ThrThr: 1.934 ± 0.0
2.9ThrVal: 2.9 ± 0.0
0.645ThrTrp: 0.645 ± 0.0
1.934ThrTyr: 1.934 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.479ValAla: 5.479 ± 0.0
1.934ValCys: 1.934 ± 0.0
2.9ValAsp: 2.9 ± 0.0
3.223ValGlu: 3.223 ± 0.0
3.545ValPhe: 3.545 ± 0.0
4.189ValGly: 4.189 ± 0.0
0.967ValHis: 0.967 ± 0.0
5.801ValIle: 5.801 ± 0.0
4.512ValLys: 4.512 ± 0.0
5.156ValLeu: 5.156 ± 0.0
2.256ValMet: 2.256 ± 0.0
2.578ValAsn: 2.578 ± 0.0
4.512ValPro: 4.512 ± 0.0
2.578ValGln: 2.578 ± 0.0
2.578ValArg: 2.578 ± 0.0
4.189ValSer: 4.189 ± 0.0
2.9ValThr: 2.9 ± 0.0
5.801ValVal: 5.801 ± 0.0
0.645ValTrp: 0.645 ± 0.0
2.256ValTyr: 2.256 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.967TrpAla: 0.967 ± 0.0
0.645TrpCys: 0.645 ± 0.0
0.967TrpAsp: 0.967 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.645TrpPhe: 0.645 ± 0.0
0.645TrpGly: 0.645 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.645TrpIle: 0.645 ± 0.0
0.645TrpLys: 0.645 ± 0.0
0.645TrpLeu: 0.645 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.645TrpPro: 0.645 ± 0.0
0.645TrpGln: 0.645 ± 0.0
1.289TrpArg: 1.289 ± 0.0
1.934TrpSer: 1.934 ± 0.0
0.322TrpThr: 0.322 ± 0.0
1.934TrpVal: 1.934 ± 0.0
0.322TrpTrp: 0.322 ± 0.0
1.611TrpTyr: 1.611 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.578TyrAla: 2.578 ± 0.0
0.645TyrCys: 0.645 ± 0.0
1.934TyrAsp: 1.934 ± 0.0
2.9TyrGlu: 2.9 ± 0.0
1.289TyrPhe: 1.289 ± 0.0
3.223TyrGly: 3.223 ± 0.0
1.289TyrHis: 1.289 ± 0.0
2.578TyrIle: 2.578 ± 0.0
1.611TyrLys: 1.611 ± 0.0
4.512TyrLeu: 4.512 ± 0.0
1.289TyrMet: 1.289 ± 0.0
2.578TyrAsn: 2.578 ± 0.0
1.934TyrPro: 1.934 ± 0.0
1.611TyrGln: 1.611 ± 0.0
1.289TyrArg: 1.289 ± 0.0
4.512TyrSer: 4.512 ± 0.0
2.256TyrThr: 2.256 ± 0.0
2.9TyrVal: 2.9 ± 0.0
0.322TyrTrp: 0.322 ± 0.0
3.867TyrTyr: 3.867 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3104 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski