Capybara microvirus Cap1_SP_81

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W496|A0A4P8W496_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_81 OX=2584792 PE=4 SV=1
MM1 pKa = 7.38SLSKK5 pKa = 9.94TIGGDD10 pKa = 3.04RR11 pKa = 11.84LGAGNKK17 pKa = 9.1QKK19 pKa = 10.51VHH21 pKa = 4.94LHH23 pKa = 5.14NYY25 pKa = 7.97EE26 pKa = 3.87RR27 pKa = 11.84ATFNLDD33 pKa = 2.88KK34 pKa = 10.56VVRR37 pKa = 11.84MSMAPGILYY46 pKa = 9.07PFYY49 pKa = 11.21QNVALLGDD57 pKa = 3.5TWDD60 pKa = 3.5ININSLVRR68 pKa = 11.84TIPTIGPLFGTFKK81 pKa = 9.94MQIDD85 pKa = 3.98FFFYY89 pKa = 10.31PIRR92 pKa = 11.84LAQGLLHH99 pKa = 6.65NNPLNLGMEE108 pKa = 4.22TDD110 pKa = 4.34KK111 pKa = 11.27IKK113 pKa = 10.92LPQIEE118 pKa = 4.97IEE120 pKa = 4.03TDD122 pKa = 3.36TQKK125 pKa = 10.81SEE127 pKa = 4.51RR128 pKa = 11.84NGNNWQINQSSLAAYY143 pKa = 10.09LGIRR147 pKa = 11.84GIGAPTWAEE156 pKa = 3.55QSGEE160 pKa = 4.25IIWVNPTIKK169 pKa = 10.31RR170 pKa = 11.84KK171 pKa = 9.85FNATTFLAYY180 pKa = 10.32ADD182 pKa = 3.88IFKK185 pKa = 10.61SYY187 pKa = 10.34YY188 pKa = 10.53ANKK191 pKa = 10.06QEE193 pKa = 4.27DD194 pKa = 3.52NAYY197 pKa = 10.88VIGQEE202 pKa = 4.14LGKK205 pKa = 9.6EE206 pKa = 4.09HH207 pKa = 7.16QEE209 pKa = 3.99IPDD212 pKa = 3.64WLINNYY218 pKa = 9.71LFSFGNNNGQYY229 pKa = 10.65CYY231 pKa = 11.18LNWNDD236 pKa = 5.25NEE238 pKa = 4.43KK239 pKa = 10.02QWEE242 pKa = 4.52CNLQFAPTYY251 pKa = 10.04IKK253 pKa = 10.74YY254 pKa = 10.28EE255 pKa = 4.12RR256 pKa = 11.84FDD258 pKa = 3.86KK259 pKa = 11.01DD260 pKa = 3.11HH261 pKa = 6.9SALEE265 pKa = 4.11VNMWLMSRR273 pKa = 11.84ISITTKK279 pKa = 9.95GKK281 pKa = 8.43TYY283 pKa = 10.85KK284 pKa = 10.62LPEE287 pKa = 5.07LINLEE292 pKa = 4.3VISDD296 pKa = 4.74KK297 pKa = 10.52ITITTPSEE305 pKa = 3.83YY306 pKa = 10.19EE307 pKa = 3.75FYY309 pKa = 11.28GNYY312 pKa = 8.42VQYY315 pKa = 10.8HH316 pKa = 7.1IINNSIFGGDD326 pKa = 3.74TIVEE330 pKa = 4.31TNTYY334 pKa = 11.0NEE336 pKa = 4.05TSKK339 pKa = 11.17LKK341 pKa = 11.08LIDD344 pKa = 4.22FPLKK348 pKa = 10.9NIDD351 pKa = 3.42DD352 pKa = 3.76ARR354 pKa = 11.84YY355 pKa = 9.71IILGHH360 pKa = 5.5NQPNEE365 pKa = 3.83ALSINEE371 pKa = 4.64DD372 pKa = 4.22LNFLPYY378 pKa = 10.31SQWSGKK384 pKa = 7.22DD385 pKa = 3.05TKK387 pKa = 11.21NRR389 pKa = 11.84TNNYY393 pKa = 7.31WPHH396 pKa = 6.22NGLFIKK402 pKa = 9.62TYY404 pKa = 10.51QSDD407 pKa = 4.18LFNNWVKK414 pKa = 10.37TDD416 pKa = 5.22FITGDD421 pKa = 3.24NGIQEE426 pKa = 4.06ITKK429 pKa = 9.83IDD431 pKa = 3.72TTDD434 pKa = 3.38GLILDD439 pKa = 5.02EE440 pKa = 5.15LNLMQKK446 pKa = 9.59VYY448 pKa = 11.57NMLNRR453 pKa = 11.84VAISGGTYY461 pKa = 9.73EE462 pKa = 5.9DD463 pKa = 4.18YY464 pKa = 11.64LEE466 pKa = 4.17VQYY469 pKa = 11.15GVSALRR475 pKa = 11.84LEE477 pKa = 4.27EE478 pKa = 4.07TPVYY482 pKa = 10.02IGGYY486 pKa = 6.15STEE489 pKa = 3.93IDD491 pKa = 3.71FEE493 pKa = 4.58EE494 pKa = 4.64VTSNAASNATGEE506 pKa = 4.15IQNLGSLAGKK516 pKa = 9.85GINRR520 pKa = 11.84SPKK523 pKa = 9.91GGRR526 pKa = 11.84ISYY529 pKa = 9.46KK530 pKa = 9.14PKK532 pKa = 10.17EE533 pKa = 3.9IGFIMGICSLTPRR546 pKa = 11.84IDD548 pKa = 3.41YY549 pKa = 10.75SQGNKK554 pKa = 7.84FWEE557 pKa = 4.47TEE559 pKa = 3.79IEE561 pKa = 4.21TLADD565 pKa = 3.3FHH567 pKa = 7.77VPAMDD572 pKa = 5.16GIGYY576 pKa = 9.56QDD578 pKa = 5.96LITEE582 pKa = 3.94QMAYY586 pKa = 10.36FDD588 pKa = 4.42TLILPDD594 pKa = 3.8GEE596 pKa = 4.63IIKK599 pKa = 10.47HH600 pKa = 5.01SAGKK604 pKa = 9.87IPAWLNYY611 pKa = 6.66MTDD614 pKa = 3.13VNEE617 pKa = 4.49TYY619 pKa = 11.45GNFADD624 pKa = 3.94NDD626 pKa = 3.9EE627 pKa = 4.81TSGQMWMTLNRR638 pKa = 11.84NYY640 pKa = 10.56EE641 pKa = 4.03RR642 pKa = 11.84TNDD645 pKa = 4.33GIGDD649 pKa = 4.18LTTYY653 pKa = 10.58IDD655 pKa = 3.63PTKK658 pKa = 10.63YY659 pKa = 10.59NYY661 pKa = 10.92AFAVKK666 pKa = 10.23DD667 pKa = 3.72LEE669 pKa = 4.43AQNFWAQIGMNIVARR684 pKa = 11.84RR685 pKa = 11.84KK686 pKa = 9.14MSAKK690 pKa = 10.1QIPNLL695 pKa = 3.74

Molecular weight: 79.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7L2|A0A4P8W7L2_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_81 OX=2584792 PE=4 SV=1
MM1 pKa = 7.62CLYY4 pKa = 10.06PRR6 pKa = 11.84TIRR9 pKa = 11.84NPRR12 pKa = 11.84FAVGNKK18 pKa = 9.45NGYY21 pKa = 8.55SQDD24 pKa = 3.48DD25 pKa = 3.89CTDD28 pKa = 2.97KK29 pKa = 11.16RR30 pKa = 11.84KK31 pKa = 10.32LFIKK35 pKa = 9.8IDD37 pKa = 3.64CGNCEE42 pKa = 3.6EE43 pKa = 4.82CKK45 pKa = 10.06RR46 pKa = 11.84KK47 pKa = 9.67RR48 pKa = 11.84GKK50 pKa = 8.52WWTIRR55 pKa = 11.84IMEE58 pKa = 4.28EE59 pKa = 3.66LKK61 pKa = 10.7VNKK64 pKa = 8.83GTFVTLTFSAHH75 pKa = 6.83SLLQLTKK82 pKa = 10.9GEE84 pKa = 4.24KK85 pKa = 9.66TPTANEE91 pKa = 4.01TARR94 pKa = 11.84KK95 pKa = 8.41AVRR98 pKa = 11.84RR99 pKa = 11.84FLEE102 pKa = 4.38RR103 pKa = 11.84YY104 pKa = 7.03RR105 pKa = 11.84KK106 pKa = 10.06KK107 pKa = 9.62YY108 pKa = 9.05GHH110 pKa = 6.42SIKK113 pKa = 10.49HH114 pKa = 5.2ILITEE119 pKa = 4.63LGDD122 pKa = 4.64DD123 pKa = 4.22EE124 pKa = 5.51NEE126 pKa = 4.0HH127 pKa = 6.25TGRR130 pKa = 11.84IHH132 pKa = 6.54LHH134 pKa = 6.43GILFDD139 pKa = 4.58TITKK143 pKa = 10.59DD144 pKa = 3.03EE145 pKa = 5.37LYY147 pKa = 11.07NLWQYY152 pKa = 11.66GYY154 pKa = 10.33VDD156 pKa = 3.24TGSYY160 pKa = 10.45CNEE163 pKa = 3.41RR164 pKa = 11.84TANYY168 pKa = 5.37ITKK171 pKa = 10.37YY172 pKa = 8.01ITKK175 pKa = 9.91LDD177 pKa = 3.97TKK179 pKa = 10.59HH180 pKa = 6.83PEE182 pKa = 3.81YY183 pKa = 9.85KK184 pKa = 10.17QKK186 pKa = 10.74IFISAGLGKK195 pKa = 10.39NYY197 pKa = 10.25VEE199 pKa = 3.95TAKK202 pKa = 10.45RR203 pKa = 11.84QKK205 pKa = 10.47KK206 pKa = 9.02KK207 pKa = 10.66VYY209 pKa = 9.93RR210 pKa = 11.84FTNGTQFPLPTYY222 pKa = 9.76YY223 pKa = 10.46KK224 pKa = 9.96NKK226 pKa = 9.54VFTEE230 pKa = 4.22EE231 pKa = 4.18EE232 pKa = 4.3RR233 pKa = 11.84EE234 pKa = 4.15QMWTDD239 pKa = 3.37EE240 pKa = 4.28LNKK243 pKa = 10.2NEE245 pKa = 4.46HH246 pKa = 6.88YY247 pKa = 9.61ITGITYY253 pKa = 9.14RR254 pKa = 11.84YY255 pKa = 7.68RR256 pKa = 11.84AGVIGIKK263 pKa = 10.42GKK265 pKa = 8.67EE266 pKa = 3.79LEE268 pKa = 4.02QARR271 pKa = 11.84RR272 pKa = 11.84EE273 pKa = 4.14NEE275 pKa = 4.11TRR277 pKa = 11.84KK278 pKa = 9.41HH279 pKa = 4.86AQIANEE285 pKa = 3.81NKK287 pKa = 10.49GYY289 pKa = 11.3GNTKK293 pKa = 7.83KK294 pKa = 9.29TKK296 pKa = 10.19DD297 pKa = 3.31VLINEE302 pKa = 4.46KK303 pKa = 9.57MLQNSQKK310 pKa = 10.68EE311 pKa = 4.22EE312 pKa = 4.12QKK314 pKa = 11.33DD315 pKa = 3.53KK316 pKa = 11.67

Molecular weight: 37.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1622

75

695

270.3

30.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.597 ± 1.211

0.863 ± 0.411

5.117 ± 0.577

7.275 ± 1.004

3.268 ± 0.598

7.707 ± 1.484

1.665 ± 0.395

7.522 ± 1.342

7.707 ± 1.602

7.398 ± 0.651

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.466 ± 0.423

8.57 ± 0.491

2.713 ± 0.642

4.932 ± 0.577

4.254 ± 0.857

4.501 ± 0.929

7.213 ± 0.751

3.329 ± 0.348

1.85 ± 0.264

5.055 ± 0.669
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski